RNA–Protein interactions for RNA: ENST00000445506.6

MSR1-205, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 1,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-205ENST00000445506 WASHC2CQ9Y4E1 1318 aa17.3■□□□□ 0.36
MSR1-205ENST00000445506 SCAF11Q99590 1463 aaKnown RBP17.29■□□□□ 0.36
MSR1-205ENST00000445506 PIK3C2BO00750 1634 aa17.28■□□□□ 0.36
MSR1-205ENST00000445506 GGT6Q6P531 493 aa17.27■□□□□ 0.36
MSR1-205ENST00000445506 TESK2Q96S53 571 aa17.27■□□□□ 0.36
MSR1-205ENST00000445506 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
MSR1-205ENST00000445506 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.35
MSR1-205ENST00000445506 TMF1P82094 1093 aa17.26■□□□□ 0.35
MSR1-205ENST00000445506 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
MSR1-205ENST00000445506 SETBP1Q9Y6X0 1596 aa17.26■□□□□ 0.35
MSR1-205ENST00000445506 CDCA8Q53HL2 280 aa17.25■□□□□ 0.35
MSR1-205ENST00000445506 UGGT1Q9NYU2 1555 aa17.25■□□□□ 0.35
MSR1-205ENST00000445506 PPLO60437 1756 aa17.24■□□□□ 0.35
MSR1-205ENST00000445506 RALBP1Q15311 655 aa17.23■□□□□ 0.35
MSR1-205ENST00000445506 SLC52A1Q9NWF4 448 aa17.21■□□□□ 0.35
MSR1-205ENST00000445506 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
MSR1-205ENST00000445506 SYNMO15061 1565 aa17.2■□□□□ 0.34
MSR1-205ENST00000445506 MYO3AQ8NEV4 1616 aa17.19■□□□□ 0.34
MSR1-205ENST00000445506 ZFYVE9O95405 1425 aa17.19■□□□□ 0.34
MSR1-205ENST00000445506 MRS2Q9HD23 443 aa17.19■□□□□ 0.34
MSR1-205ENST00000445506 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
MSR1-205ENST00000445506 POLR3GLQ9BT43 218 aa17.18■□□□□ 0.34
MSR1-205ENST00000445506 DISP3Q9P2K9 1392 aa17.18■□□□□ 0.34
MSR1-205ENST00000445506 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
MSR1-205ENST00000445506 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
MSR1-205ENST00000445506 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
MSR1-205ENST00000445506 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
MSR1-205ENST00000445506 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
MSR1-205ENST00000445506 ARHGEF40Q8TER5 1519 aa17.15■□□□□ 0.34
MSR1-205ENST00000445506 MSH5O43196 834 aa17.15■□□□□ 0.34
MSR1-205ENST00000445506 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
MSR1-205ENST00000445506 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.34
MSR1-205ENST00000445506 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.33
MSR1-205ENST00000445506 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
MSR1-205ENST00000445506 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
MSR1-205ENST00000445506 NEXMIFQ5QGS0 1516 aa17.13■□□□□ 0.33
MSR1-205ENST00000445506 CFAP65Q6ZU64 1925 aaKnown RBP17.13■□□□□ 0.33
MSR1-205ENST00000445506 CFAP70Q5T0N1 1121 aa17.12■□□□□ 0.33
MSR1-205ENST00000445506 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
MSR1-205ENST00000445506 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
MSR1-205ENST00000445506 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
MSR1-205ENST00000445506 ADGRB1O14514 1584 aa17.1■□□□□ 0.33
MSR1-205ENST00000445506 INSRP06213 1382 aa17.1■□□□□ 0.33
MSR1-205ENST00000445506 TMEM131LA2VDJ0 1609 aa17.1■□□□□ 0.33
MSR1-205ENST00000445506 ERVK-7P63135 1459 aa17.1■□□□□ 0.33
MSR1-205ENST00000445506 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
MSR1-205ENST00000445506 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
MSR1-205ENST00000445506 CHGAP10645 457 aaKnown RBP17.09■□□□□ 0.33
MSR1-205ENST00000445506 SPATA31D1Q6ZQQ2 1576 aa17.08■□□□□ 0.33
MSR1-205ENST00000445506 IDI1Q13907 227 aa17.08■□□□□ 0.32
MSR1-205ENST00000445506 PUS7Q96PZ0 661 aaKnown RBP17.08■□□□□ 0.32
MSR1-205ENST00000445506 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
MSR1-205ENST00000445506 TMC1Q8TDI8 760 aa17.06■□□□□ 0.32
MSR1-205ENST00000445506 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
MSR1-205ENST00000445506 PANK3Q9H999 370 aa17.06■□□□□ 0.32
MSR1-205ENST00000445506 ADRA2BP18089 450 aa17.06■□□□□ 0.32
MSR1-205ENST00000445506 LRPPRCP42704 1394 aaKnown RBP17.06■□□□□ 0.32
MSR1-205ENST00000445506 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
MSR1-205ENST00000445506 MYOM1P52179 1685 aa17.05■□□□□ 0.32
MSR1-205ENST00000445506 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
MSR1-205ENST00000445506 CENPJQ9HC77 1338 aaPredicted RBP17.04■□□□□ 0.32
MSR1-205ENST00000445506 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
MSR1-205ENST00000445506 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
MSR1-205ENST00000445506 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
MSR1-205ENST00000445506 QRICH2Q9H0J4 1663 aa17■□□□□ 0.31
MSR1-205ENST00000445506 MYO5BQ9ULV0 1848 aa17■□□□□ 0.31
MSR1-205ENST00000445506 NEFLP07196 543 aa17■□□□□ 0.31
MSR1-205ENST00000445506 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
MSR1-205ENST00000445506 ADAMTSL3P82987 1691 aa16.98■□□□□ 0.31
MSR1-205ENST00000445506 AMER1Q5JTC6 1135 aaPredicted RBP16.96■□□□□ 0.31
MSR1-205ENST00000445506 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.31
MSR1-205ENST00000445506 A2ML1A8K2U0 1454 aa16.95■□□□□ 0.3
MSR1-205ENST00000445506 PTPRMP28827 1452 aa16.95■□□□□ 0.3
MSR1-205ENST00000445506 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
MSR1-205ENST00000445506 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
MSR1-205ENST00000445506 ESF1Q9H501 851 aaKnown RBP16.94■□□□□ 0.3
MSR1-205ENST00000445506 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
MSR1-205ENST00000445506 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
MSR1-205ENST00000445506 ZMYM3Q14202 1370 aa16.93■□□□□ 0.3
MSR1-205ENST00000445506 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
MSR1-205ENST00000445506 PELP1Q8IZL8 1130 aaKnown RBP16.93■□□□□ 0.3
MSR1-205ENST00000445506 USP32Q8NFA0 1604 aa16.92■□□□□ 0.3
MSR1-205ENST00000445506 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
MSR1-205ENST00000445506 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
MSR1-205ENST00000445506 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
MSR1-205ENST00000445506 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
MSR1-205ENST00000445506 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
MSR1-205ENST00000445506 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
MSR1-205ENST00000445506 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
MSR1-205ENST00000445506 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
MSR1-205ENST00000445506 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
MSR1-205ENST00000445506 RIMS2Q9UQ26 1411 aa16.89■□□□□ 0.29
MSR1-205ENST00000445506 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
MSR1-205ENST00000445506 YTHDC2Q9H6S0 1430 aaKnown RBP16.88■□□□□ 0.29
MSR1-205ENST00000445506 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
MSR1-205ENST00000445506 FKBP8Q14318 412 aa16.88■□□□□ 0.29
MSR1-205ENST00000445506 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
MSR1-205ENST00000445506 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
MSR1-205ENST00000445506 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
MSR1-205ENST00000445506 RIMS1Q86UR5 1692 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms