RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 TMF1P82094 1093 aa25.05■■□□□ 1.6
PMPCB-204ENST00000444457 NPM2Q86SE8 214 aaKnown RBP25.05■■□□□ 1.6
PMPCB-204ENST00000444457 VWDEQ8N2E2 1590 aa25.04■■□□□ 1.6
PMPCB-204ENST00000444457 PDE4AP27815 886 aa25.03■■□□□ 1.6
PMPCB-204ENST00000444457 BACH2Q9BYV9 841 aa25.02■■□□□ 1.6
PMPCB-204ENST00000444457 MS4A1P11836 297 aa25.01■■□□□ 1.59
PMPCB-204ENST00000444457 ADGRL1O94910 1474 aa25■■□□□ 1.59
PMPCB-204ENST00000444457 PANK3Q9H999 370 aa25■■□□□ 1.59
PMPCB-204ENST00000444457 KANK1Q14678 1352 aa24.98■■□□□ 1.59
PMPCB-204ENST00000444457 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
PMPCB-204ENST00000444457 SCAPERQ9BY12 1400 aa24.97■■□□□ 1.59
PMPCB-204ENST00000444457 CC2D1BQ5T0F9 858 aaKnown RBP24.96■■□□□ 1.59
PMPCB-204ENST00000444457 MROH1Q8NDA8 1641 aa24.96■■□□□ 1.59
PMPCB-204ENST00000444457 RRP1P56182 461 aaKnown RBP24.96■■□□□ 1.59
PMPCB-204ENST00000444457 NEURL4Q96JN8 1562 aa24.94■■□□□ 1.58
PMPCB-204ENST00000444457 ASXL2Q76L83 1435 aa24.94■■□□□ 1.58
PMPCB-204ENST00000444457 SCAF11Q99590 1463 aaKnown RBP24.93■■□□□ 1.58
PMPCB-204ENST00000444457 KIF3BO15066 747 aa24.93■■□□□ 1.58
PMPCB-204ENST00000444457 GSE1Q14687 1217 aa24.93■■□□□ 1.58
PMPCB-204ENST00000444457 KIAA1210Q9ULL0 1709 aa24.92■■□□□ 1.58
PMPCB-204ENST00000444457 EXOC6Q8TAG9 804 aa24.92■■□□□ 1.58
PMPCB-204ENST00000444457 BRPF3Q9ULD4 1205 aa24.92■■□□□ 1.58
PMPCB-204ENST00000444457 ZMYM4Q5VZL5 1548 aa24.92■■□□□ 1.58
PMPCB-204ENST00000444457 INSRP06213 1382 aa24.91■■□□□ 1.58
PMPCB-204ENST00000444457 KIDINS220Q9ULH0 1771 aa24.9■■□□□ 1.58
PMPCB-204ENST00000444457 SYNMO15061 1565 aa24.89■■□□□ 1.57
PMPCB-204ENST00000444457 DDRGK1Q96HY6 314 aa24.89■■□□□ 1.57
PMPCB-204ENST00000444457 BLMP54132 1417 aaPredicted RBP24.89■■□□□ 1.57
PMPCB-204ENST00000444457 PDE3BQ13370 1112 aa24.87■■□□□ 1.57
PMPCB-204ENST00000444457 KIF1BO60333 1816 aa24.87■■□□□ 1.57
PMPCB-204ENST00000444457 EFCAB6Q5THR3 1501 aa24.87■■□□□ 1.57
PMPCB-204ENST00000444457 CYB5RLQ6IPT4 315 aa24.86■■□□□ 1.57
PMPCB-204ENST00000444457 UGGT1Q9NYU2 1555 aa24.85■■□□□ 1.57
PMPCB-204ENST00000444457 MAP3K4Q9Y6R4 1608 aa24.85■■□□□ 1.57
PMPCB-204ENST00000444457 MYOM1P52179 1685 aa24.85■■□□□ 1.57
PMPCB-204ENST00000444457 CDCA8Q53HL2 280 aa24.84■■□□□ 1.57
PMPCB-204ENST00000444457 MYOM2P54296 1465 aa24.84■■□□□ 1.57
PMPCB-204ENST00000444457 EIF3AQ14152 1382 aaKnown RBP24.83■■□□□ 1.57
PMPCB-204ENST00000444457 PPRC1Q5VV67 1664 aaKnown RBP24.83■■□□□ 1.57
PMPCB-204ENST00000444457 IFT172Q9UG01 1749 aa24.83■■□□□ 1.57
PMPCB-204ENST00000444457 ABCA6Q8N139 1617 aa24.82■■□□□ 1.56
PMPCB-204ENST00000444457 ZNF518AQ6AHZ1 1483 aa24.82■■□□□ 1.56
PMPCB-204ENST00000444457 RIMBP3CA6NJZ7 1639 aa24.82■■□□□ 1.56
PMPCB-204ENST00000444457 RIMBP3BA6NNM3 1639 aa24.82■■□□□ 1.56
PMPCB-204ENST00000444457 RIMBP3Q9UFD9 1639 aa24.82■■□□□ 1.56
PMPCB-204ENST00000444457 RCAN3Q9UKA8 241 aa24.81■■□□□ 1.56
PMPCB-204ENST00000444457 NFKBIBQ15653 356 aa24.81■■□□□ 1.56
PMPCB-204ENST00000444457 KNSTRNQ9Y448 316 aa24.81■■□□□ 1.56
PMPCB-204ENST00000444457 MROH2AA6NES4 1674 aa24.8■■□□□ 1.56
PMPCB-204ENST00000444457 KDM5AP29375 1690 aaKnown RBP24.8■■□□□ 1.56
PMPCB-204ENST00000444457 LMTK2Q8IWU2 1503 aa24.8■■□□□ 1.56
PMPCB-204ENST00000444457 AMER1Q5JTC6 1135 aaPredicted RBP24.78■■□□□ 1.56
PMPCB-204ENST00000444457 ASXL1Q8IXJ9 1541 aa24.77■■□□□ 1.56
PMPCB-204ENST00000444457 CFAP74Q9C0B2 1584 aa24.77■■□□□ 1.56
PMPCB-204ENST00000444457 FRAT1Q92837 279 aaPredicted RBP24.76■■□□□ 1.55
PMPCB-204ENST00000444457 CDCA7LQ96GN5 454 aa24.75■■□□□ 1.55
PMPCB-204ENST00000444457 PPP2R1AP30153 589 aa24.74■■□□□ 1.55
PMPCB-204ENST00000444457 ADGRF5Q8IZF2 1346 aa24.74■■□□□ 1.55
PMPCB-204ENST00000444457 CFAP70Q5T0N1 1121 aa24.73■■□□□ 1.55
PMPCB-204ENST00000444457 NRXN1Q9ULB1 1477 aa24.72■■□□□ 1.55
PMPCB-204ENST00000444457 POGZQ7Z3K3 1410 aa24.71■■□□□ 1.55
PMPCB-204ENST00000444457 NPM1P06748 294 aaKnown RBP eCLIP24.71■■□□□ 1.55
PMPCB-204ENST00000444457 NPC1L1Q9UHC9 1359 aa24.71■■□□□ 1.55
PMPCB-204ENST00000444457 ADGRB3O60242 1522 aa24.71■■□□□ 1.55
PMPCB-204ENST00000444457 ADAMTS8Q9UP79 889 aa24.71■■□□□ 1.55
PMPCB-204ENST00000444457 ERVK-7P63135 1459 aa24.7■■□□□ 1.54
PMPCB-204ENST00000444457 FRMPD1Q5SYB0 1578 aa24.7■■□□□ 1.54
PMPCB-204ENST00000444457 EIF5BO60841 1220 aaKnown RBP24.69■■□□□ 1.54
PMPCB-204ENST00000444457 CD109Q6YHK3 1445 aa24.69■■□□□ 1.54
PMPCB-204ENST00000444457 MYO3AQ8NEV4 1616 aa24.69■■□□□ 1.54
PMPCB-204ENST00000444457 PIK3C2GO75747 1445 aa24.69■■□□□ 1.54
PMPCB-204ENST00000444457 HECW2Q9P2P5 1572 aa24.69■■□□□ 1.54
PMPCB-204ENST00000444457 RSPH6AQ9H0K4 717 aa24.68■■□□□ 1.54
PMPCB-204ENST00000444457 SLC24A1O60721 1099 aa24.68■■□□□ 1.54
PMPCB-204ENST00000444457 MLH3Q9UHC1 1453 aa24.68■■□□□ 1.54
PMPCB-204ENST00000444457 FAM43AQ8N2R8 423 aa24.66■■□□□ 1.54
PMPCB-204ENST00000444457 CFAP65Q6ZU64 1925 aaKnown RBP24.66■■□□□ 1.54
PMPCB-204ENST00000444457 WDR43Q15061 677 aaKnown RBP eCLIP24.66■■□□□ 1.54
PMPCB-204ENST00000444457 NPATQ14207 1427 aa24.65■■□□□ 1.54
PMPCB-204ENST00000444457 SETBP1Q9Y6X0 1596 aa24.65■■□□□ 1.54
PMPCB-204ENST00000444457 PPLO60437 1756 aa24.64■■□□□ 1.54
PMPCB-204ENST00000444457 NOS1P29475 1434 aa24.64■■□□□ 1.54
PMPCB-204ENST00000444457 SBNO2Q9Y2G9 1366 aa24.62■■□□□ 1.53
PMPCB-204ENST00000444457 PLEKHH1Q9ULM0 1364 aa24.6■■□□□ 1.53
PMPCB-204ENST00000444457 SLC4A3P48751 1232 aa24.59■■□□□ 1.53
PMPCB-204ENST00000444457 DAXXQ9UER7 740 aaPredicted RBP24.59■■□□□ 1.53
PMPCB-204ENST00000444457 SKAP1Q86WV1 359 aa24.59■■□□□ 1.53
PMPCB-204ENST00000444457 ABCC3O15438 1527 aa24.58■■□□□ 1.53
PMPCB-204ENST00000444457 CHGAP10645 457 aaKnown RBP24.58■■□□□ 1.52
PMPCB-204ENST00000444457 GGT6Q6P531 493 aa24.58■■□□□ 1.52
PMPCB-204ENST00000444457 ZC3H13Q5T200 1668 aaKnown RBP24.58■■□□□ 1.52
PMPCB-204ENST00000444457 CRBNQ96SW2 442 aa24.57■■□□□ 1.52
PMPCB-204ENST00000444457 KDM2BQ8NHM5 1336 aa24.56■■□□□ 1.52
PMPCB-204ENST00000444457 ZNF521Q96K83 1311 aa24.56■■□□□ 1.52
PMPCB-204ENST00000444457 CAMSAP1Q5T5Y3 1602 aa24.55■■□□□ 1.52
PMPCB-204ENST00000444457 PLIN1O60240 522 aa24.55■■□□□ 1.52
PMPCB-204ENST00000444457 CENPJQ9HC77 1338 aaPredicted RBP24.55■■□□□ 1.52
PMPCB-204ENST00000444457 QRICH2Q9H0J4 1663 aa24.54■■□□□ 1.52
PMPCB-204ENST00000444457 CARD14Q9BXL6 1004 aa24.54■■□□□ 1.52
PMPCB-204ENST00000444457 ADGRB1O14514 1584 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms