RNA–Protein interactions for RNA: ENST00000442937.5

LINC00578-202, long intergenic non-protein coding RNA 578, humanhuman

TSL 3 BASIC

Gene LINC00578, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-202ENST00000442937 TET3O43151 1660 aa11.39□□□□□ -0.59
LINC00578-202ENST00000442937 SLIT1O75093 1534 aa11.39□□□□□ -0.59
LINC00578-202ENST00000442937 IQGAP3Q86VI3 1631 aa11.38□□□□□ -0.59
LINC00578-202ENST00000442937 SYNMO15061 1565 aa11.38□□□□□ -0.59
LINC00578-202ENST00000442937 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
LINC00578-202ENST00000442937 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
LINC00578-202ENST00000442937 EID1Q9Y6B2 187 aa11.37□□□□□ -0.59
LINC00578-202ENST00000442937 CFAP65Q6ZU64 1925 aaKnown RBP11.37□□□□□ -0.59
LINC00578-202ENST00000442937 NEURL4Q96JN8 1562 aa11.37□□□□□ -0.59
LINC00578-202ENST00000442937 ZNF335Q9H4Z2 1342 aaPredicted RBP11.36□□□□□ -0.59
LINC00578-202ENST00000442937 HRCP23327 699 aa11.36□□□□□ -0.59
LINC00578-202ENST00000442937 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
LINC00578-202ENST00000442937 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
LINC00578-202ENST00000442937 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
LINC00578-202ENST00000442937 KDM5AP29375 1690 aaKnown RBP11.35□□□□□ -0.59
LINC00578-202ENST00000442937 UBR1Q8IWV7 1749 aa11.35□□□□□ -0.59
LINC00578-202ENST00000442937 TRIM52Q96A61 297 aa11.34□□□□□ -0.59
LINC00578-202ENST00000442937 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
LINC00578-202ENST00000442937 IQSEC2Q5JU85 1478 aa11.33□□□□□ -0.6
LINC00578-202ENST00000442937 PIK3C2BO00750 1634 aa11.33□□□□□ -0.6
LINC00578-202ENST00000442937 ZFYVE9O95405 1425 aa11.33□□□□□ -0.6
LINC00578-202ENST00000442937 SETD5Q9C0A6 1442 aa11.33□□□□□ -0.6
LINC00578-202ENST00000442937 E9PCH4 1651 aa11.33□□□□□ -0.6
LINC00578-202ENST00000442937 ZBTB22O15209 634 aa11.32□□□□□ -0.6
LINC00578-202ENST00000442937 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00578-202ENST00000442937 MPHOSPH9Q99550 1183 aa11.32□□□□□ -0.6
LINC00578-202ENST00000442937 ADGRB3O60242 1522 aa11.31□□□□□ -0.6
LINC00578-202ENST00000442937 POLA2Q14181 598 aa11.31□□□□□ -0.6
LINC00578-202ENST00000442937 TBX22Q9Y458 520 aa11.3□□□□□ -0.6
LINC00578-202ENST00000442937 RIMS2Q9UQ26 1411 aa11.29□□□□□ -0.6
LINC00578-202ENST00000442937 TMEM131LA2VDJ0 1609 aa11.29□□□□□ -0.6
LINC00578-202ENST00000442937 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
LINC00578-202ENST00000442937 POLR1AO95602 1720 aaPredicted RBP11.29□□□□□ -0.6
LINC00578-202ENST00000442937 PLEKHG1Q9ULL1 1385 aa11.28□□□□□ -0.6
LINC00578-202ENST00000442937 KCNA6P17658 529 aa11.28□□□□□ -0.6
LINC00578-202ENST00000442937 CPS1P31327 1500 aa11.28□□□□□ -0.6
LINC00578-202ENST00000442937 CHGAP10645 457 aaKnown RBP11.27□□□□□ -0.61
LINC00578-202ENST00000442937 SLC26A8Q96RN1 970 aa11.27□□□□□ -0.61
LINC00578-202ENST00000442937 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.61
LINC00578-202ENST00000442937 TRPM2O94759 1503 aa11.26□□□□□ -0.61
LINC00578-202ENST00000442937 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
LINC00578-202ENST00000442937 IQGAP1P46940 1657 aa11.26□□□□□ -0.61
LINC00578-202ENST00000442937 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
LINC00578-202ENST00000442937 ADAMTS13Q76LX8 1427 aa11.24□□□□□ -0.61
LINC00578-202ENST00000442937 LRRC7Q96NW7 1537 aa11.24□□□□□ -0.61
LINC00578-202ENST00000442937 PPP1R15AO75807 674 aaPredicted RBP11.23□□□□□ -0.61
LINC00578-202ENST00000442937 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
LINC00578-202ENST00000442937 SPHKAPQ2M3C7 1700 aa11.22□□□□□ -0.61
LINC00578-202ENST00000442937 UBAP1LF5GYI3 381 aa11.21□□□□□ -0.61
LINC00578-202ENST00000442937 TOM1O60784 492 aa11.21□□□□□ -0.61
LINC00578-202ENST00000442937 ZNF326Q5BKZ1 582 aaKnown RBP11.21□□□□□ -0.61
LINC00578-202ENST00000442937 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
LINC00578-202ENST00000442937 CLTCL1P53675 1640 aa11.2□□□□□ -0.62
LINC00578-202ENST00000442937 SPATA31E1Q6ZUB1 1445 aa11.2□□□□□ -0.62
LINC00578-202ENST00000442937 BCANQ96GW7 911 aa11.2□□□□□ -0.62
LINC00578-202ENST00000442937 ANKRD30BQ9BXX2 1392 aa11.19□□□□□ -0.62
LINC00578-202ENST00000442937 PROSER2Q86WR7 435 aaPredicted RBP11.19□□□□□ -0.62
LINC00578-202ENST00000442937 CCDC144AA2RUR9 1427 aa11.18□□□□□ -0.62
LINC00578-202ENST00000442937 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
LINC00578-202ENST00000442937 STRCP1A6NGW2 1772 aa11.18□□□□□ -0.62
LINC00578-202ENST00000442937 TMEM94Q12767 1356 aa11.18□□□□□ -0.62
LINC00578-202ENST00000442937 MYO5BQ9ULV0 1848 aa11.18□□□□□ -0.62
LINC00578-202ENST00000442937 AMOTL2Q9Y2J4 779 aa11.17□□□□□ -0.62
LINC00578-202ENST00000442937 NEXMIFQ5QGS0 1516 aa11.17□□□□□ -0.62
LINC00578-202ENST00000442937 NKTRP30414 1462 aaKnown RBP11.17□□□□□ -0.62
LINC00578-202ENST00000442937 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
LINC00578-202ENST00000442937 PTPRUQ92729 1446 aa11.16□□□□□ -0.62
LINC00578-202ENST00000442937 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
LINC00578-202ENST00000442937 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
LINC00578-202ENST00000442937 METP08581 1390 aa11.16□□□□□ -0.62
LINC00578-202ENST00000442937 RGL3Q3MIN7 710 aa11.15□□□□□ -0.62
LINC00578-202ENST00000442937 ALKQ9UM73 1620 aa11.15□□□□□ -0.62
LINC00578-202ENST00000442937 ADGRF5Q8IZF2 1346 aa11.14□□□□□ -0.63
LINC00578-202ENST00000442937 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
LINC00578-202ENST00000442937 C19orf44Q9H6X5 657 aa11.13□□□□□ -0.63
LINC00578-202ENST00000442937 CHD2O14647 1828 aaKnown RBP11.13□□□□□ -0.63
LINC00578-202ENST00000442937 NRXN3Q9Y4C0 1643 aa11.13□□□□□ -0.63
LINC00578-202ENST00000442937 KIF1BO60333 1816 aa11.12□□□□□ -0.63
LINC00578-202ENST00000442937 FAM135BQ49AJ0 1406 aa11.12□□□□□ -0.63
LINC00578-202ENST00000442937 PRAG1Q86YV5 1406 aa11.12□□□□□ -0.63
LINC00578-202ENST00000442937 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
LINC00578-202ENST00000442937 RBM33Q96EV2 1170 aaKnown RBP11.12□□□□□ -0.63
LINC00578-202ENST00000442937 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
LINC00578-202ENST00000442937 C14orf93Q9H972 538 aaKnown RBP11.11□□□□□ -0.63
LINC00578-202ENST00000442937 HSPA1LP34931 641 aa11.1□□□□□ -0.63
LINC00578-202ENST00000442937 PIP4K2BP78356 416 aa11.1□□□□□ -0.63
LINC00578-202ENST00000442937 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
LINC00578-202ENST00000442937 SIRT1Q96EB6 747 aa11.1□□□□□ -0.63
LINC00578-202ENST00000442937 SLAIN2Q9P270 581 aa11.1□□□□□ -0.63
LINC00578-202ENST00000442937 NRXN1Q9ULB1 1477 aa11.09□□□□□ -0.63
LINC00578-202ENST00000442937 MSH6P52701 1360 aa11.09□□□□□ -0.63
LINC00578-202ENST00000442937 CADPS2Q86UW7 1296 aa11.09□□□□□ -0.63
LINC00578-202ENST00000442937 ABCC11Q96J66 1382 aa11.08□□□□□ -0.64
LINC00578-202ENST00000442937 XIRP1Q702N8 1843 aaKnown RBP11.08□□□□□ -0.64
LINC00578-202ENST00000442937 PIK3C2GO75747 1445 aa11.08□□□□□ -0.64
LINC00578-202ENST00000442937 DHX57Q6P158 1386 aaKnown RBP11.07□□□□□ -0.64
LINC00578-202ENST00000442937 MYOM2P54296 1465 aa11.06□□□□□ -0.64
LINC00578-202ENST00000442937 LRPPRCP42704 1394 aaKnown RBP11.06□□□□□ -0.64
LINC00578-202ENST00000442937 ROBO2Q9HCK4 1378 aa11.06□□□□□ -0.64
LINC00578-202ENST00000442937 PPLO60437 1756 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms