RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 NOS1P29475 1434 aa22.14■■□□□ 1.13
LINC00642-202ENST00000442515 FGD6Q6ZV73 1430 aa22.14■■□□□ 1.13
LINC00642-202ENST00000442515 MEX3CQ5U5Q3 659 aaKnown RBP22.13■■□□□ 1.13
LINC00642-202ENST00000442515 ZNF772Q68DY9 489 aaPredicted RBP22.13■■□□□ 1.13
LINC00642-202ENST00000442515 BCANQ96GW7 911 aa22.13■■□□□ 1.13
LINC00642-202ENST00000442515 VPS8Q8N3P4 1428 aa22.12■■□□□ 1.13
LINC00642-202ENST00000442515 CROCC2H7BZ55 1655 aa22.08■■□□□ 1.13
LINC00642-202ENST00000442515 PLEKHG1Q9ULL1 1385 aa22.08■■□□□ 1.12
LINC00642-202ENST00000442515 ZFYVE9O95405 1425 aa22.07■■□□□ 1.12
LINC00642-202ENST00000442515 SLC52A1Q9NWF4 448 aa22.07■■□□□ 1.12
LINC00642-202ENST00000442515 DAPK1P53355 1430 aa22.06■■□□□ 1.12
LINC00642-202ENST00000442515 AHDC1Q5TGY3 1603 aaPredicted RBP22.05■■□□□ 1.12
LINC00642-202ENST00000442515 NCOA3Q9Y6Q9 1424 aa22.05■■□□□ 1.12
LINC00642-202ENST00000442515 PPP1R15AO75807 674 aaPredicted RBP22.03■■□□□ 1.12
LINC00642-202ENST00000442515 RXRBP28702 533 aa22.03■■□□□ 1.12
LINC00642-202ENST00000442515 C14orf37Q86TY3 774 aa22.03■■□□□ 1.12
LINC00642-202ENST00000442515 RIMS2Q9UQ26 1411 aa22.02■■□□□ 1.12
LINC00642-202ENST00000442515 CDK12Q9NYV4 1490 aaPredicted RBP22.02■■□□□ 1.12
LINC00642-202ENST00000442515 ANKRD30AQ9BXX3 1397 aa22.01■■□□□ 1.11
LINC00642-202ENST00000442515 PTPN23Q9H3S7 1636 aa22.01■■□□□ 1.11
LINC00642-202ENST00000442515 SHPRHQ149N8 1683 aa22.01■■□□□ 1.11
LINC00642-202ENST00000442515 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
LINC00642-202ENST00000442515 CHD2O14647 1828 aaKnown RBP21.99■■□□□ 1.11
LINC00642-202ENST00000442515 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
LINC00642-202ENST00000442515 TBX22Q9Y458 520 aa21.99■■□□□ 1.11
LINC00642-202ENST00000442515 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
LINC00642-202ENST00000442515 ATF3P18847 181 aa21.97■■□□□ 1.11
LINC00642-202ENST00000442515 C19orf44Q9H6X5 657 aa21.97■■□□□ 1.11
LINC00642-202ENST00000442515 NUTM2BA6NNL0 878 aaPredicted RBP21.96■■□□□ 1.11
LINC00642-202ENST00000442515 NUTM2EB1AL46 878 aaPredicted RBP21.96■■□□□ 1.11
LINC00642-202ENST00000442515 NUTM2AQ8IVF1 878 aaPredicted RBP21.96■■□□□ 1.11
LINC00642-202ENST00000442515 ADAMTS13Q76LX8 1427 aa21.96■■□□□ 1.11
LINC00642-202ENST00000442515 DIP2AQ14689 1571 aa21.95■■□□□ 1.11
LINC00642-202ENST00000442515 HDGFP51858 240 aaKnown RBP21.95■■□□□ 1.1
LINC00642-202ENST00000442515 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
LINC00642-202ENST00000442515 AFF2P51816 1311 aa21.95■■□□□ 1.1
LINC00642-202ENST00000442515 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.93■■□□□ 1.1
LINC00642-202ENST00000442515 TMEM131LA2VDJ0 1609 aa21.92■■□□□ 1.1
LINC00642-202ENST00000442515 RGS12O14924 1447 aa21.92■■□□□ 1.1
LINC00642-202ENST00000442515 PIK3R4Q99570 1358 aa21.92■■□□□ 1.1
LINC00642-202ENST00000442515 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC00642-202ENST00000442515 NUTM2DQ5VT03 806 aaPredicted RBP21.9■■□□□ 1.1
LINC00642-202ENST00000442515 GCC2Q8IWJ2 1684 aa21.9■■□□□ 1.1
LINC00642-202ENST00000442515 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.09
LINC00642-202ENST00000442515 ASXL1Q8IXJ9 1541 aa21.88■■□□□ 1.09
LINC00642-202ENST00000442515 ADGRL2O95490 1459 aa21.88■■□□□ 1.09
LINC00642-202ENST00000442515 CHGAP10645 457 aaKnown RBP21.87■■□□□ 1.09
LINC00642-202ENST00000442515 DCCP43146 1447 aa21.87■■□□□ 1.09
LINC00642-202ENST00000442515 MYO5BQ9ULV0 1848 aa21.87■■□□□ 1.09
LINC00642-202ENST00000442515 PTPRUQ92729 1446 aa21.86■■□□□ 1.09
LINC00642-202ENST00000442515 ANKRD50Q9ULJ7 1429 aa21.86■■□□□ 1.09
LINC00642-202ENST00000442515 RBM6P78332 1123 aaKnown RBP21.85■■□□□ 1.09
LINC00642-202ENST00000442515 C8orf37Q96NL8 207 aa21.85■■□□□ 1.09
LINC00642-202ENST00000442515 AMOTL2Q9Y2J4 779 aa21.85■■□□□ 1.09
LINC00642-202ENST00000442515 TRPM2O94759 1503 aa21.84■■□□□ 1.09
LINC00642-202ENST00000442515 MST1RQ04912 1400 aa21.83■■□□□ 1.09
LINC00642-202ENST00000442515 QTRT2Q9H974 415 aaKnown RBP21.83■■□□□ 1.09
LINC00642-202ENST00000442515 PNPLA6Q8IY17 1366 aa21.8■■□□□ 1.08
LINC00642-202ENST00000442515 LRRC59Q96AG4 307 aaKnown RBP21.8■■□□□ 1.08
LINC00642-202ENST00000442515 EP400Q96L91 3159 aa21.8■■□□□ 1.08
LINC00642-202ENST00000442515 LOC105371045A0A1W2PR82 267 aa21.79■■□□□ 1.08
LINC00642-202ENST00000442515 NHSL1Q5SYE7 1610 aa21.79■■□□□ 1.08
LINC00642-202ENST00000442515 APLP2Q06481 763 aa21.77■■□□□ 1.08
LINC00642-202ENST00000442515 DDX17Q92841 729 aaKnown RBP21.77■■□□□ 1.08
LINC00642-202ENST00000442515 ATAD2Q6PL18 1390 aa21.76■■□□□ 1.07
LINC00642-202ENST00000442515 UNC13BO14795 1591 aa21.76■■□□□ 1.07
LINC00642-202ENST00000442515 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
LINC00642-202ENST00000442515 ADAMTS2O95450 1211 aa21.73■■□□□ 1.07
LINC00642-202ENST00000442515 NGLY1Q96IV0 654 aa21.73■■□□□ 1.07
LINC00642-202ENST00000442515 ADGRL3Q9HAR2 1447 aa21.72■■□□□ 1.07
LINC00642-202ENST00000442515 FAM50AQ14320 339 aaKnown RBP21.71■■□□□ 1.07
LINC00642-202ENST00000442515 NRXN3Q9Y4C0 1643 aa21.7■■□□□ 1.06
LINC00642-202ENST00000442515 E9PCH4 1651 aa21.7■■□□□ 1.06
LINC00642-202ENST00000442515 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
LINC00642-202ENST00000442515 ZRANB1Q9UGI0 708 aa21.69■■□□□ 1.06
LINC00642-202ENST00000442515 METP08581 1390 aa21.69■■□□□ 1.06
LINC00642-202ENST00000442515 USP21Q9UK80 565 aa21.67■■□□□ 1.06
LINC00642-202ENST00000442515 FOXD1Q16676 465 aa21.66■■□□□ 1.06
LINC00642-202ENST00000442515 TRPC5Q9UL62 973 aaPredicted RBP21.66■■□□□ 1.06
LINC00642-202ENST00000442515 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.06
LINC00642-202ENST00000442515 IQGAP3Q86VI3 1631 aa21.63■■□□□ 1.05
LINC00642-202ENST00000442515 ATRNO75882 1429 aa21.63■■□□□ 1.05
LINC00642-202ENST00000442515 FNBP4Q8N3X1 1017 aaPredicted RBP21.62■■□□□ 1.05
LINC00642-202ENST00000442515 PTCH1Q13635 1447 aa21.62■■□□□ 1.05
LINC00642-202ENST00000442515 SOS2Q07890 1332 aaPredicted RBP21.61■■□□□ 1.05
LINC00642-202ENST00000442515 NALCNQ8IZF0 1738 aa21.61■■□□□ 1.05
LINC00642-202ENST00000442515 NUP155O75694 1391 aa21.6■■□□□ 1.05
LINC00642-202ENST00000442515 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
LINC00642-202ENST00000442515 LAMC1P11047 1609 aa21.58■■□□□ 1.05
LINC00642-202ENST00000442515 ORAI2Q96SN7 254 aa21.57■■□□□ 1.04
LINC00642-202ENST00000442515 ROCK1Q13464 1354 aa21.57■■□□□ 1.04
LINC00642-202ENST00000442515 CCDC125Q86Z20 511 aa21.56■■□□□ 1.04
LINC00642-202ENST00000442515 MYOM2P54296 1465 aa21.53■■□□□ 1.04
LINC00642-202ENST00000442515 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.04
LINC00642-202ENST00000442515 ROBO2Q9HCK4 1378 aa21.52■■□□□ 1.04
LINC00642-202ENST00000442515 NEXMIFQ5QGS0 1516 aa21.51■■□□□ 1.03
LINC00642-202ENST00000442515 COL22A1Q8NFW1 1626 aaPredicted RBP21.51■■□□□ 1.03
LINC00642-202ENST00000442515 SPHKAPQ2M3C7 1700 aa21.47■■□□□ 1.03
LINC00642-202ENST00000442515 GJD4Q96KN9 370 aaPredicted RBP21.47■■□□□ 1.03
LINC00642-202ENST00000442515 BLMP54132 1417 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms