RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 CROCC2H7BZ55 1655 aa14□□□□□ -0.17
BRPF3-204ENST00000441730 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
BRPF3-204ENST00000441730 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
BRPF3-204ENST00000441730 NPATQ14207 1427 aa13.98□□□□□ -0.17
BRPF3-204ENST00000441730 UGGT1Q9NYU2 1555 aa13.97□□□□□ -0.17
BRPF3-204ENST00000441730 NBPF8Q3BBV2 869 aa13.96□□□□□ -0.17
BRPF3-204ENST00000441730 TXNDC2Q86VQ3 553 aa13.96□□□□□ -0.17
BRPF3-204ENST00000441730 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.17
BRPF3-204ENST00000441730 KDM4FA0A1W2PPD8 638 aa13.96□□□□□ -0.18
BRPF3-204ENST00000441730 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.18
BRPF3-204ENST00000441730 CDK11BP21127 795 aaKnown RBP13.95□□□□□ -0.18
BRPF3-204ENST00000441730 NBPF1Q3BBV0 1214 aa13.95□□□□□ -0.18
BRPF3-204ENST00000441730 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
BRPF3-204ENST00000441730 CARD11Q9BXL7 1154 aa13.95□□□□□ -0.18
BRPF3-204ENST00000441730 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
BRPF3-204ENST00000441730 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
BRPF3-204ENST00000441730 C11orf95C9JLR9 678 aaPredicted RBP13.95□□□□□ -0.18
BRPF3-204ENST00000441730 GCC2Q8IWJ2 1684 aa13.95□□□□□ -0.18
BRPF3-204ENST00000441730 SLC52A1Q9NWF4 448 aa13.93□□□□□ -0.18
BRPF3-204ENST00000441730 HSP90B1P14625 803 aaKnown RBP13.93□□□□□ -0.18
BRPF3-204ENST00000441730 TPRNQ4KMQ1 711 aa13.93□□□□□ -0.18
BRPF3-204ENST00000441730 RTL5Q5HYW3 569 aaPredicted RBP13.93□□□□□ -0.18
BRPF3-204ENST00000441730 TNRQ92752 1358 aa13.93□□□□□ -0.18
BRPF3-204ENST00000441730 IPO4Q8TEX9 1081 aaKnown RBP13.93□□□□□ -0.18
BRPF3-204ENST00000441730 TRAK1Q9UPV9 953 aa13.93□□□□□ -0.18
BRPF3-204ENST00000441730 ADGRF5Q8IZF2 1346 aa13.93□□□□□ -0.18
BRPF3-204ENST00000441730 ARHGEF40Q8TER5 1519 aa13.92□□□□□ -0.18
BRPF3-204ENST00000441730 EID1Q9Y6B2 187 aa13.92□□□□□ -0.18
BRPF3-204ENST00000441730 NUTM2FA1L443 756 aa13.92□□□□□ -0.18
BRPF3-204ENST00000441730 CHMP4BQ9H444 224 aaKnown RBP13.91□□□□□ -0.18
BRPF3-204ENST00000441730 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
BRPF3-204ENST00000441730 ZMYM4Q5VZL5 1548 aa13.91□□□□□ -0.18
BRPF3-204ENST00000441730 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
BRPF3-204ENST00000441730 PLA2R1Q13018 1463 aa13.9□□□□□ -0.19
BRPF3-204ENST00000441730 ABCC3O15438 1527 aa13.89□□□□□ -0.19
BRPF3-204ENST00000441730 PRDM15P57071 1507 aaPredicted RBP13.89□□□□□ -0.19
BRPF3-204ENST00000441730 MIER1Q8N108 512 aa13.89□□□□□ -0.19
BRPF3-204ENST00000441730 THEMISQ8N1K5 641 aaPredicted RBP13.89□□□□□ -0.19
BRPF3-204ENST00000441730 CEP152O94986 1710 aa13.88□□□□□ -0.19
BRPF3-204ENST00000441730 VGFO15240 615 aaPredicted RBP13.88□□□□□ -0.19
BRPF3-204ENST00000441730 NBR1Q14596 966 aa13.88□□□□□ -0.19
BRPF3-204ENST00000441730 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
BRPF3-204ENST00000441730 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
BRPF3-204ENST00000441730 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
BRPF3-204ENST00000441730 ZNF316A6NFI3 1004 aaPredicted RBP13.86□□□□□ -0.19
BRPF3-204ENST00000441730 LTKP29376 864 aa13.86□□□□□ -0.19
BRPF3-204ENST00000441730 ROCK2O75116 1388 aaKnown RBP13.85□□□□□ -0.19
BRPF3-204ENST00000441730 CLTCQ00610 1675 aaKnown RBP13.85□□□□□ -0.19
BRPF3-204ENST00000441730 NOS1P29475 1434 aa13.85□□□□□ -0.19
BRPF3-204ENST00000441730 POGKQ9P215 609 aa13.85□□□□□ -0.19
BRPF3-204ENST00000441730 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
BRPF3-204ENST00000441730 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
BRPF3-204ENST00000441730 ZFP91Q96JP5 570 aaPredicted RBP13.84□□□□□ -0.19
BRPF3-204ENST00000441730 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
BRPF3-204ENST00000441730 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.19
BRPF3-204ENST00000441730 HSP90AA2PQ14568 343 aaPredicted RBP13.84□□□□□ -0.19
BRPF3-204ENST00000441730 IRX6P78412 446 aaPredicted RBP13.83□□□□□ -0.2
BRPF3-204ENST00000441730 ANKLE2Q86XL3 938 aa13.83□□□□□ -0.2
BRPF3-204ENST00000441730 RPRD2Q5VT52 1461 aaKnown RBP13.83□□□□□ -0.2
BRPF3-204ENST00000441730 DDX10Q13206 875 aaKnown RBP13.83□□□□□ -0.2
BRPF3-204ENST00000441730 ST20-MTHFSA0A0A6YYL1 179 aa13.82□□□□□ -0.2
BRPF3-204ENST00000441730 MROH1Q8NDA8 1641 aa13.81□□□□□ -0.2
BRPF3-204ENST00000441730 MADDQ8WXG6 1647 aa13.81□□□□□ -0.2
BRPF3-204ENST00000441730 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
BRPF3-204ENST00000441730 ERVK-7P63135 1459 aa13.8□□□□□ -0.2
BRPF3-204ENST00000441730 AGLP35573 1532 aa13.8□□□□□ -0.2
BRPF3-204ENST00000441730 TEX2Q8IWB9 1127 aa13.8□□□□□ -0.2
BRPF3-204ENST00000441730 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
BRPF3-204ENST00000441730 UNC13BO14795 1591 aa13.8□□□□□ -0.2
BRPF3-204ENST00000441730 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
BRPF3-204ENST00000441730 E9PCH4 1651 aa13.79□□□□□ -0.2
BRPF3-204ENST00000441730 RIMS1Q86UR5 1692 aaKnown RBP13.79□□□□□ -0.2
BRPF3-204ENST00000441730 CANXP27824 592 aaKnown RBP13.79□□□□□ -0.2
BRPF3-204ENST00000441730 WAPLQ7Z5K2 1190 aa13.79□□□□□ -0.2
BRPF3-204ENST00000441730 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
BRPF3-204ENST00000441730 PTPRMP28827 1452 aa13.79□□□□□ -0.2
BRPF3-204ENST00000441730 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
BRPF3-204ENST00000441730 TMC1Q8TDI8 760 aa13.79□□□□□ -0.2
BRPF3-204ENST00000441730 NOP58Q9Y2X3 529 aaKnown RBP13.77□□□□□ -0.21
BRPF3-204ENST00000441730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
BRPF3-204ENST00000441730 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.77□□□□□ -0.21
BRPF3-204ENST00000441730 KCNA4P22459 653 aa13.76□□□□□ -0.21
BRPF3-204ENST00000441730 RIMS2Q9UQ26 1411 aa13.76□□□□□ -0.21
BRPF3-204ENST00000441730 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
BRPF3-204ENST00000441730 UHRF1BP1Q6BDS2 1440 aa13.75□□□□□ -0.21
BRPF3-204ENST00000441730 TET3O43151 1660 aa13.75□□□□□ -0.21
BRPF3-204ENST00000441730 FTSJ3Q8IY81 847 aaKnown RBP13.75□□□□□ -0.21
BRPF3-204ENST00000441730 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
BRPF3-204ENST00000441730 PTPRTO14522 1441 aa13.74□□□□□ -0.21
BRPF3-204ENST00000441730 PRAM1Q96QH2 718 aa13.74□□□□□ -0.21
BRPF3-204ENST00000441730 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
BRPF3-204ENST00000441730 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-204ENST00000441730 ARHGAP31Q2M1Z3 1444 aa13.73□□□□□ -0.21
BRPF3-204ENST00000441730 CLTCL1P53675 1640 aa13.73□□□□□ -0.21
BRPF3-204ENST00000441730 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
BRPF3-204ENST00000441730 SECISBP2LQ93073 1101 aaKnown RBP13.72□□□□□ -0.21
BRPF3-204ENST00000441730 TMEM2Q9UHN6 1383 aa13.72□□□□□ -0.21
BRPF3-204ENST00000441730 AMOTL2Q9Y2J4 779 aa13.72□□□□□ -0.21
BRPF3-204ENST00000441730 FER1L4A9Z1Z3 1794 aa13.72□□□□□ -0.21
BRPF3-204ENST00000441730 CALD1Q05682 793 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms