RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 EIF4G2P78344 907 aaKnown RBP eCLIP39.57■■■■□ 3.93
CGREF1-207ENST00000440612 NBPF1Q3BBV0 1214 aa39.57■■■■□ 3.93
CGREF1-207ENST00000440612 A2ML1A8K2U0 1454 aa39.54■■■■□ 3.92
CGREF1-207ENST00000440612 ROCK2O75116 1388 aaKnown RBP39.54■■■■□ 3.92
CGREF1-207ENST00000440612 CARD11Q9BXL7 1154 aa39.51■■■■□ 3.92
CGREF1-207ENST00000440612 RIMS1Q86UR5 1692 aaKnown RBP39.5■■■■□ 3.91
CGREF1-207ENST00000440612 USP47Q96K76 1375 aa39.5■■■■□ 3.91
CGREF1-207ENST00000440612 LAMC1P11047 1609 aa39.5■■■■□ 3.91
CGREF1-207ENST00000440612 PIK3C2GO75747 1445 aa39.48■■■■□ 3.91
CGREF1-207ENST00000440612 ZFYVE9O95405 1425 aa39.48■■■■□ 3.91
CGREF1-207ENST00000440612 KIAA1210Q9ULL0 1709 aa39.47■■■■□ 3.91
CGREF1-207ENST00000440612 NLRP1Q9C000 1473 aa39.44■■■■□ 3.9
CGREF1-207ENST00000440612 KDM5AP29375 1690 aaKnown RBP39.43■■■■□ 3.9
CGREF1-207ENST00000440612 VGFO15240 615 aaPredicted RBP39.41■■■■□ 3.9
CGREF1-207ENST00000440612 STAG3Q9UJ98 1225 aa39.41■■■■□ 3.9
CGREF1-207ENST00000440612 CFAP70Q5T0N1 1121 aa39.4■■■■□ 3.9
CGREF1-207ENST00000440612 NUTM2DQ5VT03 806 aaPredicted RBP39.4■■■■□ 3.9
CGREF1-207ENST00000440612 UBR1Q8IWV7 1749 aa39.38■■■■□ 3.9
CGREF1-207ENST00000440612 DIEXFQ68CQ4 756 aaKnown RBP39.35■■■■□ 3.89
CGREF1-207ENST00000440612 PLPPR3Q6T4P5 718 aa39.35■■■■□ 3.89
CGREF1-207ENST00000440612 C14orf93Q9H972 538 aaKnown RBP39.35■■■■□ 3.89
CGREF1-207ENST00000440612 RIMS2Q9UQ26 1411 aa39.34■■■■□ 3.89
CGREF1-207ENST00000440612 C11orf95C9JLR9 678 aaPredicted RBP39.31■■■■□ 3.88
CGREF1-207ENST00000440612 IQGAP1P46940 1657 aa39.3■■■■□ 3.88
CGREF1-207ENST00000440612 SETBP1Q9Y6X0 1596 aa39.3■■■■□ 3.88
CGREF1-207ENST00000440612 MYO3AQ8NEV4 1616 aa39.29■■■■□ 3.88
CGREF1-207ENST00000440612 ST20-MTHFSA0A0A6YYL1 179 aa39.29■■■■□ 3.88
CGREF1-207ENST00000440612 ADGRB1O14514 1584 aa39.28■■■■□ 3.88
CGREF1-207ENST00000440612 TMEM2Q9UHN6 1383 aa39.27■■■■□ 3.88
CGREF1-207ENST00000440612 WASHC2AQ641Q2 1341 aa39.26■■■■□ 3.88
CGREF1-207ENST00000440612 SCAF11Q99590 1463 aaKnown RBP39.26■■■■□ 3.87
CGREF1-207ENST00000440612 PTPRMP28827 1452 aa39.24■■■■□ 3.87
CGREF1-207ENST00000440612 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.18■■■■□ 3.86
CGREF1-207ENST00000440612 ASXL1Q8IXJ9 1541 aa39.17■■■■□ 3.86
CGREF1-207ENST00000440612 ARHGAP23Q9P227 1491 aa39.17■■■■□ 3.86
CGREF1-207ENST00000440612 CCDC7Q96M83 1385 aa39.17■■■■□ 3.86
CGREF1-207ENST00000440612 CEP170BQ9Y4F5 1589 aaPredicted RBP39.16■■■■□ 3.86
CGREF1-207ENST00000440612 SLIT1O75093 1534 aa39.16■■■■□ 3.86
CGREF1-207ENST00000440612 TESK2Q96S53 571 aa39.16■■■■□ 3.86
CGREF1-207ENST00000440612 ALKQ9UM73 1620 aa39.14■■■■□ 3.86
CGREF1-207ENST00000440612 KIF7Q2M1P5 1343 aa39.14■■■■□ 3.86
CGREF1-207ENST00000440612 TMEM132EQ6IEE7 984 aa39.13■■■■□ 3.86
CGREF1-207ENST00000440612 NRXN3Q9Y4C0 1643 aa39.13■■■■□ 3.85
CGREF1-207ENST00000440612 POLR1AO95602 1720 aaPredicted RBP39.13■■■■□ 3.85
CGREF1-207ENST00000440612 DDX10Q13206 875 aaKnown RBP39.13■■■■□ 3.85
CGREF1-207ENST00000440612 LTKP29376 864 aa39.09■■■■□ 3.85
CGREF1-207ENST00000440612 ZNF142P52746 1687 aaPredicted RBP39.09■■■■□ 3.85
CGREF1-207ENST00000440612 HDGFP51858 240 aaKnown RBP39.09■■■■□ 3.85
CGREF1-207ENST00000440612 SENP3Q9H4L4 574 aaPredicted RBP39.09■■■■□ 3.85
CGREF1-207ENST00000440612 SETD1AO15047 1707 aaKnown RBP39.08■■■■□ 3.85
CGREF1-207ENST00000440612 THEMISQ8N1K5 641 aaPredicted RBP39.08■■■■□ 3.85
CGREF1-207ENST00000440612 SETD1BQ9UPS6 1966 aaKnown RBP39.07■■■■□ 3.85
CGREF1-207ENST00000440612 EIF3AQ14152 1382 aaKnown RBP39.04■■■■□ 3.84
CGREF1-207ENST00000440612 PLEKHG1Q9ULL1 1385 aa39■■■■□ 3.83
CGREF1-207ENST00000440612 TXNDC2Q86VQ3 553 aa39■■■■□ 3.83
CGREF1-207ENST00000440612 KDM4FA0A1W2PPD8 638 aa39■■■■□ 3.83
CGREF1-207ENST00000440612 TRAK1Q9UPV9 953 aa38.99■■■■□ 3.83
CGREF1-207ENST00000440612 DISP3Q9P2K9 1392 aa38.98■■■■□ 3.83
CGREF1-207ENST00000440612 ADAMTS13Q76LX8 1427 aa38.97■■■■□ 3.83
CGREF1-207ENST00000440612 YTHDC2Q9H6S0 1430 aaKnown RBP38.96■■■■□ 3.83
CGREF1-207ENST00000440612 EID1Q9Y6B2 187 aa38.94■■■■□ 3.82
CGREF1-207ENST00000440612 ARHGEF28Q8N1W1 1705 aaKnown RBP38.94■■■■□ 3.82
CGREF1-207ENST00000440612 MED14O60244 1454 aa38.93■■■■□ 3.82
CGREF1-207ENST00000440612 METP08581 1390 aa38.92■■■■□ 3.82
CGREF1-207ENST00000440612 SBNO2Q9Y2G9 1366 aa38.92■■■■□ 3.82
CGREF1-207ENST00000440612 CENPJQ9HC77 1338 aaPredicted RBP38.9■■■■□ 3.82
CGREF1-207ENST00000440612 TMF1P82094 1093 aa38.88■■■■□ 3.81
CGREF1-207ENST00000440612 LRPPRCP42704 1394 aaKnown RBP38.87■■■■□ 3.81
CGREF1-207ENST00000440612 MIER1Q8N108 512 aa38.87■■■■□ 3.81
CGREF1-207ENST00000440612 STK26Q9P289 416 aa38.86■■■■□ 3.81
CGREF1-207ENST00000440612 QRICH2Q9H0J4 1663 aa38.83■■■■□ 3.81
CGREF1-207ENST00000440612 ABCC11Q96J66 1382 aa38.82■■■■□ 3.81
CGREF1-207ENST00000440612 DLC1Q96QB1 1528 aa38.81■■■■□ 3.8
CGREF1-207ENST00000440612 POLR3GLQ9BT43 218 aa38.8■■■■□ 3.8
CGREF1-207ENST00000440612 BCANQ96GW7 911 aa38.79■■■■□ 3.8
CGREF1-207ENST00000440612 SLC24A1O60721 1099 aa38.77■■■■□ 3.8
CGREF1-207ENST00000440612 TECPR2O15040 1411 aa38.77■■■■□ 3.8
CGREF1-207ENST00000440612 ANKLE2Q86XL3 938 aa38.76■■■■□ 3.8
CGREF1-207ENST00000440612 SLC26A8Q96RN1 970 aa38.76■■■■□ 3.8
CGREF1-207ENST00000440612 TBX22Q9Y458 520 aa38.76■■■■□ 3.8
CGREF1-207ENST00000440612 DIP2AQ14689 1571 aa38.73■■■■□ 3.79
CGREF1-207ENST00000440612 PRAM1Q96QH2 718 aa38.73■■■■□ 3.79
CGREF1-207ENST00000440612 KNDC1Q76NI1 1749 aa38.73■■■■□ 3.79
CGREF1-207ENST00000440612 PTPRUQ92729 1446 aa38.71■■■■□ 3.79
CGREF1-207ENST00000440612 CDCA8Q53HL2 280 aa38.68■■■■□ 3.78
CGREF1-207ENST00000440612 CPS1P31327 1500 aa38.68■■■■□ 3.78
CGREF1-207ENST00000440612 TULP4Q9NRJ4 1543 aa38.68■■■■□ 3.78
CGREF1-207ENST00000440612 PLEKHH1Q9ULM0 1364 aa38.67■■■■□ 3.78
CGREF1-207ENST00000440612 SIRT1Q96EB6 747 aa38.67■■■■□ 3.78
CGREF1-207ENST00000440612 SAFB2Q14151 953 aaKnown RBP eCLIP38.65■■■■□ 3.78
CGREF1-207ENST00000440612 FAM135BQ49AJ0 1406 aa38.65■■■■□ 3.78
CGREF1-207ENST00000440612 WAPLQ7Z5K2 1190 aa38.64■■■■□ 3.78
CGREF1-207ENST00000440612 POGKQ9P215 609 aa38.63■■■■□ 3.77
CGREF1-207ENST00000440612 MYOM1P52179 1685 aa38.61■■■■□ 3.77
CGREF1-207ENST00000440612 ROBO2Q9HCK4 1378 aa38.61■■■■□ 3.77
CGREF1-207ENST00000440612 NPHP4O75161 1426 aaPredicted RBP38.59■■■■□ 3.77
CGREF1-207ENST00000440612 PIK3R4Q99570 1358 aa38.57■■■■□ 3.77
CGREF1-207ENST00000440612 NCKAP5LQ9HCH0 1330 aa38.57■■■■□ 3.77
CGREF1-207ENST00000440612 PUS7Q96PZ0 661 aaKnown RBP38.56■■■■□ 3.76
CGREF1-207ENST00000440612 EVC2Q86UK5 1308 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms