RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 MAP3K4Q9Y6R4 1608 aa11.16□□□□□ -0.62
SPIRE1-204ENST00000440472 GLI2P10070 1586 aa11.16□□□□□ -0.62
SPIRE1-204ENST00000440472 FRMPD1Q5SYB0 1578 aa11.16□□□□□ -0.62
SPIRE1-204ENST00000440472 KIF3BO15066 747 aa11.15□□□□□ -0.62
SPIRE1-204ENST00000440472 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
SPIRE1-204ENST00000440472 FAM9BQ8IZU0 186 aa11.14□□□□□ -0.63
SPIRE1-204ENST00000440472 ADGRB3O60242 1522 aa11.14□□□□□ -0.63
SPIRE1-204ENST00000440472 EIF3AQ14152 1382 aaKnown RBP11.13□□□□□ -0.63
SPIRE1-204ENST00000440472 SYNMO15061 1565 aa11.13□□□□□ -0.63
SPIRE1-204ENST00000440472 NLRP13Q86W25 1043 aa11.13□□□□□ -0.63
SPIRE1-204ENST00000440472 SETBP1Q9Y6X0 1596 aa11.13□□□□□ -0.63
SPIRE1-204ENST00000440472 NPC1L1Q9UHC9 1359 aa11.13□□□□□ -0.63
SPIRE1-204ENST00000440472 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
SPIRE1-204ENST00000440472 RNF123Q5XPI4 1314 aa11.12□□□□□ -0.63
SPIRE1-204ENST00000440472 SBNO2Q9Y2G9 1366 aa11.12□□□□□ -0.63
SPIRE1-204ENST00000440472 ARHGAP31Q2M1Z3 1444 aa11.11□□□□□ -0.63
SPIRE1-204ENST00000440472 TMC1Q8TDI8 760 aa11.11□□□□□ -0.63
SPIRE1-204ENST00000440472 ABCA6Q8N139 1617 aa11.11□□□□□ -0.63
SPIRE1-204ENST00000440472 RPGRIP1LQ68CZ1 1315 aa11.11□□□□□ -0.63
SPIRE1-204ENST00000440472 ZC3H13Q5T200 1668 aaKnown RBP11.11□□□□□ -0.63
SPIRE1-204ENST00000440472 ABCC3O15438 1527 aa11.1□□□□□ -0.63
SPIRE1-204ENST00000440472 POLR3GLQ9BT43 218 aa11.09□□□□□ -0.63
SPIRE1-204ENST00000440472 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
SPIRE1-204ENST00000440472 NOS1P29475 1434 aa11.09□□□□□ -0.63
SPIRE1-204ENST00000440472 KDM4FA0A1W2PPD8 638 aa11.09□□□□□ -0.63
SPIRE1-204ENST00000440472 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
SPIRE1-204ENST00000440472 NPATQ14207 1427 aa11.09□□□□□ -0.63
SPIRE1-204ENST00000440472 DIP2CQ9Y2E4 1556 aa11.08□□□□□ -0.64
SPIRE1-204ENST00000440472 TSHZ2Q9NRE2 1034 aa11.08□□□□□ -0.64
SPIRE1-204ENST00000440472 PIK3C2BO00750 1634 aa11.08□□□□□ -0.64
SPIRE1-204ENST00000440472 MROH2AA6NES4 1674 aa11.08□□□□□ -0.64
SPIRE1-204ENST00000440472 PPLO60437 1756 aa11.08□□□□□ -0.64
SPIRE1-204ENST00000440472 CAMSAP1Q5T5Y3 1602 aa11.07□□□□□ -0.64
SPIRE1-204ENST00000440472 PDE3BQ13370 1112 aa11.07□□□□□ -0.64
SPIRE1-204ENST00000440472 PPP4R2Q9NY27 417 aa11.07□□□□□ -0.64
SPIRE1-204ENST00000440472 KDM5AP29375 1690 aaKnown RBP11.07□□□□□ -0.64
SPIRE1-204ENST00000440472 BLMP54132 1417 aaPredicted RBP11.06□□□□□ -0.64
SPIRE1-204ENST00000440472 PANK3Q9H999 370 aa11.06□□□□□ -0.64
SPIRE1-204ENST00000440472 MYOM1P52179 1685 aa11.06□□□□□ -0.64
SPIRE1-204ENST00000440472 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
SPIRE1-204ENST00000440472 UGGT1Q9NYU2 1555 aa11.05□□□□□ -0.64
SPIRE1-204ENST00000440472 REREQ9P2R6 1566 aa11.05□□□□□ -0.64
SPIRE1-204ENST00000440472 PIK3C2GO75747 1445 aa11.05□□□□□ -0.64
SPIRE1-204ENST00000440472 ASXL1Q8IXJ9 1541 aa11.05□□□□□ -0.64
SPIRE1-204ENST00000440472 ZFYVE9O95405 1425 aa11.04□□□□□ -0.64
SPIRE1-204ENST00000440472 PUS7Q96PZ0 661 aaKnown RBP11.04□□□□□ -0.64
SPIRE1-204ENST00000440472 ERVK-7P63135 1459 aa11.03□□□□□ -0.64
SPIRE1-204ENST00000440472 ADGRB1O14514 1584 aa11.03□□□□□ -0.64
SPIRE1-204ENST00000440472 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.64
SPIRE1-204ENST00000440472 BCANQ96GW7 911 aa11.02□□□□□ -0.64
SPIRE1-204ENST00000440472 C14orf93Q9H972 538 aaKnown RBP11.02□□□□□ -0.64
SPIRE1-204ENST00000440472 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
SPIRE1-204ENST00000440472 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
SPIRE1-204ENST00000440472 SIGLEC1Q9BZZ2 1709 aa11.01□□□□□ -0.65
SPIRE1-204ENST00000440472 AGLP35573 1532 aa11.01□□□□□ -0.65
SPIRE1-204ENST00000440472 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
SPIRE1-204ENST00000440472 CFAP70Q5T0N1 1121 aa11□□□□□ -0.65
SPIRE1-204ENST00000440472 SLC52A1Q9NWF4 448 aa10.99□□□□□ -0.65
SPIRE1-204ENST00000440472 DIP2BQ9P265 1576 aa10.99□□□□□ -0.65
SPIRE1-204ENST00000440472 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
SPIRE1-204ENST00000440472 USP32Q8NFA0 1604 aa10.98□□□□□ -0.65
SPIRE1-204ENST00000440472 SPATA31D1Q6ZQQ2 1576 aa10.98□□□□□ -0.65
SPIRE1-204ENST00000440472 PPP2R1AP30153 589 aa10.97□□□□□ -0.65
SPIRE1-204ENST00000440472 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
SPIRE1-204ENST00000440472 CENPJQ9HC77 1338 aaPredicted RBP10.96□□□□□ -0.65
SPIRE1-204ENST00000440472 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
SPIRE1-204ENST00000440472 GGT6Q6P531 493 aa10.96□□□□□ -0.65
SPIRE1-204ENST00000440472 PREX1Q8TCU6 1659 aa10.96□□□□□ -0.65
SPIRE1-204ENST00000440472 QRICH2Q9H0J4 1663 aa10.96□□□□□ -0.66
SPIRE1-204ENST00000440472 RAPGEF3O95398 923 aa10.96□□□□□ -0.66
SPIRE1-204ENST00000440472 CC2D1BQ5T0F9 858 aaKnown RBP10.96□□□□□ -0.66
SPIRE1-204ENST00000440472 YEATS2Q9ULM3 1422 aa10.95□□□□□ -0.66
SPIRE1-204ENST00000440472 TMEM131LA2VDJ0 1609 aa10.94□□□□□ -0.66
SPIRE1-204ENST00000440472 MYT1Q01538 1121 aa10.94□□□□□ -0.66
SPIRE1-204ENST00000440472 ARHGEF28Q8N1W1 1705 aaKnown RBP10.93□□□□□ -0.66
SPIRE1-204ENST00000440472 NINLQ9Y2I6 1382 aa10.93□□□□□ -0.66
SPIRE1-204ENST00000440472 CFAP65Q6ZU64 1925 aaKnown RBP10.92□□□□□ -0.66
SPIRE1-204ENST00000440472 POLR3AO14802 1390 aaPredicted RBP10.92□□□□□ -0.66
SPIRE1-204ENST00000440472 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
SPIRE1-204ENST00000440472 ZNF521Q96K83 1311 aa10.91□□□□□ -0.66
SPIRE1-204ENST00000440472 NSD2O96028 1365 aa10.91□□□□□ -0.66
SPIRE1-204ENST00000440472 RRP1P56182 461 aaKnown RBP10.91□□□□□ -0.66
SPIRE1-204ENST00000440472 CNGB1Q14028 1251 aaPredicted RBP10.91□□□□□ -0.66
SPIRE1-204ENST00000440472 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
SPIRE1-204ENST00000440472 RBM19Q9Y4C8 960 aaKnown RBP10.91□□□□□ -0.66
SPIRE1-204ENST00000440472 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
SPIRE1-204ENST00000440472 IDI1Q13907 227 aa10.9□□□□□ -0.67
SPIRE1-204ENST00000440472 CARD14Q9BXL6 1004 aa10.9□□□□□ -0.67
SPIRE1-204ENST00000440472 WDR43Q15061 677 aaKnown RBP eCLIP10.89□□□□□ -0.67
SPIRE1-204ENST00000440472 ADAMTS8Q9UP79 889 aa10.89□□□□□ -0.67
SPIRE1-204ENST00000440472 CLTCQ00610 1675 aaKnown RBP10.89□□□□□ -0.67
SPIRE1-204ENST00000440472 CHGAP10645 457 aaKnown RBP10.88□□□□□ -0.67
SPIRE1-204ENST00000440472 EVC2Q86UK5 1308 aa10.88□□□□□ -0.67
SPIRE1-204ENST00000440472 FANCIQ9NVI1 1328 aa10.88□□□□□ -0.67
SPIRE1-204ENST00000440472 TULP4Q9NRJ4 1543 aa10.88□□□□□ -0.67
SPIRE1-204ENST00000440472 FAM69CQ0P6D2 419 aa10.87□□□□□ -0.67
SPIRE1-204ENST00000440472 ANKRD36BQ8N2N9 1353 aa10.87□□□□□ -0.67
SPIRE1-204ENST00000440472 DLC1Q96QB1 1528 aa10.87□□□□□ -0.67
SPIRE1-204ENST00000440472 TRMT2AQ8IZ69 625 aaKnown RBP10.87□□□□□ -0.67
SPIRE1-204ENST00000440472 ARHGEF40Q8TER5 1519 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms