RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 KIF1BO60333 1816 aa6.1□□□□□ -1.43
SCN3A-204ENST00000440431 MIER1Q8N108 512 aa6.1□□□□□ -1.43
SCN3A-204ENST00000440431 HIRIP3Q9BW71 556 aaPredicted RBP6.1□□□□□ -1.43
SCN3A-204ENST00000440431 TMEM131LA2VDJ0 1609 aa6.1□□□□□ -1.43
SCN3A-204ENST00000440431 WASHC2AQ641Q2 1341 aa6.1□□□□□ -1.43
SCN3A-204ENST00000440431 ARHGAP31Q2M1Z3 1444 aa6.1□□□□□ -1.43
SCN3A-204ENST00000440431 CFAP65Q6ZU64 1925 aaKnown RBP6.1□□□□□ -1.43
SCN3A-204ENST00000440431 CLTCQ00610 1675 aaKnown RBP6.09□□□□□ -1.43
SCN3A-204ENST00000440431 FAM69CQ0P6D2 419 aa6.09□□□□□ -1.43
SCN3A-204ENST00000440431 CFAP53Q96M91 514 aa6.09□□□□□ -1.43
SCN3A-204ENST00000440431 NEXMIFQ5QGS0 1516 aa6.09□□□□□ -1.43
SCN3A-204ENST00000440431 MYOM1P52179 1685 aa6.09□□□□□ -1.44
SCN3A-204ENST00000440431 ADGRB1O14514 1584 aa6.09□□□□□ -1.44
SCN3A-204ENST00000440431 NPM2Q86SE8 214 aaKnown RBP6.08□□□□□ -1.44
SCN3A-204ENST00000440431 MYO3AQ8NEV4 1616 aa6.08□□□□□ -1.44
SCN3A-204ENST00000440431 WDR43Q15061 677 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCN3A-204ENST00000440431 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.08□□□□□ -1.44
SCN3A-204ENST00000440431 TMC1Q8TDI8 760 aa6.08□□□□□ -1.44
SCN3A-204ENST00000440431 MYOM2P54296 1465 aa6.08□□□□□ -1.44
SCN3A-204ENST00000440431 ASXL1Q8IXJ9 1541 aa6.08□□□□□ -1.44
SCN3A-204ENST00000440431 SPATA31D1Q6ZQQ2 1576 aa6.08□□□□□ -1.44
SCN3A-204ENST00000440431 HSPA5P11021 654 aaKnown RBP6.07□□□□□ -1.44
SCN3A-204ENST00000440431 POGKQ9P215 609 aa6.07□□□□□ -1.44
SCN3A-204ENST00000440431 NRXN3Q9Y4C0 1643 aa6.07□□□□□ -1.44
SCN3A-204ENST00000440431 CCDC144AA2RUR9 1427 aa6.07□□□□□ -1.44
SCN3A-204ENST00000440431 KIF3BO15066 747 aa6.06□□□□□ -1.44
SCN3A-204ENST00000440431 RGL3Q3MIN7 710 aa6.06□□□□□ -1.44
SCN3A-204ENST00000440431 HAP1P54257 671 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-204ENST00000440431 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
SCN3A-204ENST00000440431 PNNQ9H307 717 aaKnown RBP6.06□□□□□ -1.44
SCN3A-204ENST00000440431 CNTLNQ9NXG0 1405 aa6.05□□□□□ -1.44
SCN3A-204ENST00000440431 TESK2Q96S53 571 aa6.05□□□□□ -1.44
SCN3A-204ENST00000440431 CARD11Q9BXL7 1154 aa6.05□□□□□ -1.44
SCN3A-204ENST00000440431 SETBP1Q9Y6X0 1596 aa6.05□□□□□ -1.44
SCN3A-204ENST00000440431 GGT6Q6P531 493 aa6.05□□□□□ -1.44
SCN3A-204ENST00000440431 NUDCQ9Y266 331 aa6.05□□□□□ -1.44
SCN3A-204ENST00000440431 EID1Q9Y6B2 187 aa6.05□□□□□ -1.44
SCN3A-204ENST00000440431 PIK3C2GO75747 1445 aa6.05□□□□□ -1.44
SCN3A-204ENST00000440431 CCDC7Q96M83 1385 aa6.04□□□□□ -1.44
SCN3A-204ENST00000440431 STAC3Q96MF2 364 aa6.04□□□□□ -1.44
SCN3A-204ENST00000440431 KNSTRNQ9Y448 316 aa6.04□□□□□ -1.44
SCN3A-204ENST00000440431 ERVK-7P63135 1459 aa6.04□□□□□ -1.44
SCN3A-204ENST00000440431 ARHGEF28Q8N1W1 1705 aaKnown RBP6.04□□□□□ -1.44
SCN3A-204ENST00000440431 KDM5AP29375 1690 aaKnown RBP6.04□□□□□ -1.44
SCN3A-204ENST00000440431 KIF7Q2M1P5 1343 aa6.03□□□□□ -1.44
SCN3A-204ENST00000440431 USP47Q96K76 1375 aa6.03□□□□□ -1.44
SCN3A-204ENST00000440431 C3P01024 1663 aa6.03□□□□□ -1.44
SCN3A-204ENST00000440431 UBR1Q8IWV7 1749 aa6.03□□□□□ -1.44
SCN3A-204ENST00000440431 TMF1P82094 1093 aa6.03□□□□□ -1.44
SCN3A-204ENST00000440431 PTPRMP28827 1452 aa6.02□□□□□ -1.44
SCN3A-204ENST00000440431 DDX10Q13206 875 aaKnown RBP6.02□□□□□ -1.45
SCN3A-204ENST00000440431 MLECQ14165 292 aa6.02□□□□□ -1.45
SCN3A-204ENST00000440431 DCAF11Q8TEB1 546 aa6.02□□□□□ -1.45
SCN3A-204ENST00000440431 ADGRF5Q8IZF2 1346 aa6.02□□□□□ -1.45
SCN3A-204ENST00000440431 CHMP4AQ9BY43 222 aa6.01□□□□□ -1.45
SCN3A-204ENST00000440431 DISP3Q9P2K9 1392 aa6.01□□□□□ -1.45
SCN3A-204ENST00000440431 DNAJC5Q9H3Z4 198 aa6.01□□□□□ -1.45
SCN3A-204ENST00000440431 WASHC2CQ9Y4E1 1318 aa6.01□□□□□ -1.45
SCN3A-204ENST00000440431 ZFYVE9O95405 1425 aa6.01□□□□□ -1.45
SCN3A-204ENST00000440431 A2ML1A8K2U0 1454 aa6□□□□□ -1.45
SCN3A-204ENST00000440431 EIF5BO60841 1220 aaKnown RBP6□□□□□ -1.45
SCN3A-204ENST00000440431 CCDC184Q52MB2 194 aa6□□□□□ -1.45
SCN3A-204ENST00000440431 MRS2Q9HD23 443 aa6□□□□□ -1.45
SCN3A-204ENST00000440431 ADAMTSL3P82987 1691 aa6□□□□□ -1.45
SCN3A-204ENST00000440431 FBXO31Q5XUX0 539 aaPredicted RBP6□□□□□ -1.45
SCN3A-204ENST00000440431 CHMP4BQ9H444 224 aaKnown RBP6□□□□□ -1.45
SCN3A-204ENST00000440431 QRICH2Q9H0J4 1663 aa5.99□□□□□ -1.45
SCN3A-204ENST00000440431 EIF3AQ14152 1382 aaKnown RBP5.99□□□□□ -1.45
SCN3A-204ENST00000440431 PER1O15534 1290 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-204ENST00000440431 IDI1Q13907 227 aa5.99□□□□□ -1.45
SCN3A-204ENST00000440431 ST20-MTHFSA0A0A6YYL1 179 aa5.99□□□□□ -1.45
SCN3A-204ENST00000440431 HDGFL2Q7Z4V5 671 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-204ENST00000440431 FER1L4A9Z1Z3 1794 aa5.99□□□□□ -1.45
SCN3A-204ENST00000440431 SCAF11Q99590 1463 aaKnown RBP5.98□□□□□ -1.45
SCN3A-204ENST00000440431 ALKQ9UM73 1620 aa5.98□□□□□ -1.45
SCN3A-204ENST00000440431 HNRNPUQ00839 825 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCN3A-204ENST00000440431 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCN3A-204ENST00000440431 TULP4Q9NRJ4 1543 aa5.97□□□□□ -1.45
SCN3A-204ENST00000440431 ROCK2O75116 1388 aaKnown RBP5.97□□□□□ -1.45
SCN3A-204ENST00000440431 VGFO15240 615 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-204ENST00000440431 ANP32EQ9BTT0 268 aa5.97□□□□□ -1.45
SCN3A-204ENST00000440431 MYH16Q9H6N6 1097 aa5.97□□□□□ -1.45
SCN3A-204ENST00000440431 MS4A1P11836 297 aa5.97□□□□□ -1.45
SCN3A-204ENST00000440431 FAM9BQ8IZU0 186 aa5.97□□□□□ -1.45
SCN3A-204ENST00000440431 MAPK8IP3Q9UPT6 1336 aa5.97□□□□□ -1.45
SCN3A-204ENST00000440431 MED14O60244 1454 aa5.97□□□□□ -1.45
SCN3A-204ENST00000440431 KNDC1Q76NI1 1749 aa5.97□□□□□ -1.45
SCN3A-204ENST00000440431 ZMYM3Q14202 1370 aa5.96□□□□□ -1.46
SCN3A-204ENST00000440431 CFAP70Q5T0N1 1121 aa5.96□□□□□ -1.46
SCN3A-204ENST00000440431 C14orf93Q9H972 538 aaKnown RBP5.96□□□□□ -1.46
SCN3A-204ENST00000440431 UPF2Q9HAU5 1272 aaKnown RBP5.96□□□□□ -1.46
SCN3A-204ENST00000440431 SRPK2P78362 688 aaKnown RBP5.95□□□□□ -1.46
SCN3A-204ENST00000440431 PPP6R1Q9UPN7 881 aa5.95□□□□□ -1.46
SCN3A-204ENST00000440431 ARHGAP23Q9P227 1491 aa5.95□□□□□ -1.46
SCN3A-204ENST00000440431 SBNO2Q9Y2G9 1366 aa5.95□□□□□ -1.46
SCN3A-204ENST00000440431 LMOD2Q6P5Q4 547 aa5.95□□□□□ -1.46
SCN3A-204ENST00000440431 ZNF142P52746 1687 aaPredicted RBP5.95□□□□□ -1.46
SCN3A-204ENST00000440431 RTL5Q5HYW3 569 aaPredicted RBP5.94□□□□□ -1.46
SCN3A-204ENST00000440431 TERF2IPQ9NYB0 399 aa5.94□□□□□ -1.46
SCN3A-204ENST00000440431 CD163L1Q9NR16 1453 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms