RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 PDE4CQ08493 712 aa17.96■□□□□ 0.47
PCNX1-202ENST00000439984 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
PCNX1-202ENST00000439984 APAF1O14727 1248 aa17.96■□□□□ 0.47
PCNX1-202ENST00000439984 PDCL3Q9H2J4 239 aa17.96■□□□□ 0.47
PCNX1-202ENST00000439984 E9PSI1 815 aa17.96■□□□□ 0.47
PCNX1-202ENST00000439984 NUCB2P80303 420 aa17.96■□□□□ 0.47
PCNX1-202ENST00000439984 WASHC2AQ641Q2 1341 aa17.96■□□□□ 0.46
PCNX1-202ENST00000439984 RILPL2Q969X0 211 aa17.95■□□□□ 0.46
PCNX1-202ENST00000439984 ERICH4A6NGS2 130 aa17.95■□□□□ 0.46
PCNX1-202ENST00000439984 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
PCNX1-202ENST00000439984 CASKIN1Q8WXD9 1431 aa17.95■□□□□ 0.46
PCNX1-202ENST00000439984 CNTLNQ9NXG0 1405 aa17.95■□□□□ 0.46
PCNX1-202ENST00000439984 SOX12O15370 315 aa17.95■□□□□ 0.46
PCNX1-202ENST00000439984 ZKSCAN2Q63HK3 967 aa17.94■□□□□ 0.46
PCNX1-202ENST00000439984 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
PCNX1-202ENST00000439984 A0A0G2JS52 829 aa17.93■□□□□ 0.46
PCNX1-202ENST00000439984 PRPF40AO75400 957 aaKnown RBP17.93■□□□□ 0.46
PCNX1-202ENST00000439984 HMGN5P82970 282 aaKnown RBP17.93■□□□□ 0.46
PCNX1-202ENST00000439984 SLC4A10Q6U841 1118 aa17.93■□□□□ 0.46
PCNX1-202ENST00000439984 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
PCNX1-202ENST00000439984 FBXW7Q969H0 707 aa17.93■□□□□ 0.46
PCNX1-202ENST00000439984 ZNF644Q9H582 1327 aaPredicted RBP17.93■□□□□ 0.46
PCNX1-202ENST00000439984 CCDC7Q96M83 1385 aa17.93■□□□□ 0.46
PCNX1-202ENST00000439984 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
PCNX1-202ENST00000439984 TPM3P06753 285 aa17.92■□□□□ 0.46
PCNX1-202ENST00000439984 MCM4P33991 863 aa17.92■□□□□ 0.46
PCNX1-202ENST00000439984 SRPK2P78362 688 aaKnown RBP17.92■□□□□ 0.46
PCNX1-202ENST00000439984 LNPKQ9C0E8 428 aa17.92■□□□□ 0.46
PCNX1-202ENST00000439984 TPD52L1Q16890 204 aaPredicted RBP17.92■□□□□ 0.46
PCNX1-202ENST00000439984 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
PCNX1-202ENST00000439984 ATP6V1DQ9Y5K8 247 aa17.91■□□□□ 0.46
PCNX1-202ENST00000439984 ARGLU1Q9NWB6 273 aaPredicted RBP17.9■□□□□ 0.46
PCNX1-202ENST00000439984 MNS1Q8NEH6 495 aa17.9■□□□□ 0.46
PCNX1-202ENST00000439984 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
PCNX1-202ENST00000439984 SPC24Q8NBT2 197 aa17.9■□□□□ 0.46
PCNX1-202ENST00000439984 USP47Q96K76 1375 aa17.9■□□□□ 0.46
PCNX1-202ENST00000439984 SF3A1Q15459 793 aaKnown RBP17.89■□□□□ 0.46
PCNX1-202ENST00000439984 NCOA2Q15596 1464 aa17.89■□□□□ 0.45
PCNX1-202ENST00000439984 HMMRO75330 724 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 CGNQ9P2M7 1197 aaKnown RBP17.88■□□□□ 0.45
PCNX1-202ENST00000439984 ZSCAN30Q86W11 494 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 CWC15Q9P013 229 aaKnown RBP17.88■□□□□ 0.45
PCNX1-202ENST00000439984 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 TSPY26PQ9H489 355 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 H3BQV1 296 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 IFFO2Q5TF58 517 aa17.88■□□□□ 0.45
PCNX1-202ENST00000439984 CALRP27797 417 aaKnown RBP17.87■□□□□ 0.45
PCNX1-202ENST00000439984 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
PCNX1-202ENST00000439984 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
PCNX1-202ENST00000439984 TIAM1Q13009 1591 aa17.86■□□□□ 0.45
PCNX1-202ENST00000439984 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
PCNX1-202ENST00000439984 SKIDA1Q1XH10 827 aa17.86■□□□□ 0.45
PCNX1-202ENST00000439984 BBXQ8WY36 941 aaPredicted RBP17.86■□□□□ 0.45
PCNX1-202ENST00000439984 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
PCNX1-202ENST00000439984 BICD2Q8TD16 824 aa17.85■□□□□ 0.45
PCNX1-202ENST00000439984 TRERF1Q96PN7 1200 aa17.85■□□□□ 0.45
PCNX1-202ENST00000439984 DZIP1LQ8IYY4 767 aaKnown RBP17.84■□□□□ 0.45
PCNX1-202ENST00000439984 PDCL2Q8N4E4 241 aa17.84■□□□□ 0.45
PCNX1-202ENST00000439984 VPS37CA5D8V6 355 aaPredicted RBP17.84■□□□□ 0.45
PCNX1-202ENST00000439984 HAP1P54257 671 aaPredicted RBP17.84■□□□□ 0.45
PCNX1-202ENST00000439984 PDZRN3Q9UPQ7 1066 aa17.84■□□□□ 0.45
PCNX1-202ENST00000439984 RTF1Q92541 710 aaKnown RBP17.83■□□□□ 0.45
PCNX1-202ENST00000439984 REC8O95072 547 aa17.83■□□□□ 0.44
PCNX1-202ENST00000439984 SASS6Q6UVJ0 657 aa17.82■□□□□ 0.44
PCNX1-202ENST00000439984 DDX19BQ9UMR2 479 aa17.82■□□□□ 0.44
PCNX1-202ENST00000439984 EFCAB2Q5VUJ9 269 aa17.82■□□□□ 0.44
PCNX1-202ENST00000439984 PES1O00541 588 aaKnown RBP17.82■□□□□ 0.44
PCNX1-202ENST00000439984 ISY1Q9ULR0 285 aaKnown RBP17.82■□□□□ 0.44
PCNX1-202ENST00000439984 KIF3AQ9Y496 699 aa17.81■□□□□ 0.44
PCNX1-202ENST00000439984 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
PCNX1-202ENST00000439984 TRIM5Q9C035 493 aa17.8■□□□□ 0.44
PCNX1-202ENST00000439984 KANK1Q14678 1352 aa17.8■□□□□ 0.44
PCNX1-202ENST00000439984 FAM184AQ8NB25 1140 aa17.8■□□□□ 0.44
PCNX1-202ENST00000439984 HSP90B2PQ58FF3 399 aa17.8■□□□□ 0.44
PCNX1-202ENST00000439984 TAF3Q5VWG9 929 aa17.8■□□□□ 0.44
PCNX1-202ENST00000439984 H0YHG0 523 aa17.79■□□□□ 0.44
PCNX1-202ENST00000439984 ANO2Q9NQ90 1003 aa17.79■□□□□ 0.44
PCNX1-202ENST00000439984 CCDC27Q2M243 656 aa17.79■□□□□ 0.44
PCNX1-202ENST00000439984 TAF7LQ5H9L4 462 aa17.79■□□□□ 0.44
PCNX1-202ENST00000439984 STK26Q9P289 416 aa17.79■□□□□ 0.44
PCNX1-202ENST00000439984 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
PCNX1-202ENST00000439984 SPDYE4A6NLX3 237 aa17.77■□□□□ 0.44
PCNX1-202ENST00000439984 GGT6Q6P531 493 aa17.77■□□□□ 0.44
PCNX1-202ENST00000439984 CHMP4AQ9BY43 222 aa17.77■□□□□ 0.44
PCNX1-202ENST00000439984 EFCAB5A4FU69 1503 aa17.77■□□□□ 0.43
PCNX1-202ENST00000439984 LEKR1Q6ZMV7 388 aa17.77■□□□□ 0.43
PCNX1-202ENST00000439984 CCDC112Q8NEF3 446 aa17.77■□□□□ 0.43
PCNX1-202ENST00000439984 SMC3Q9UQE7 1217 aa17.77■□□□□ 0.43
PCNX1-202ENST00000439984 MBD3O95983 291 aa17.76■□□□□ 0.43
PCNX1-202ENST00000439984 INTS3Q68E01 1043 aaKnown RBP17.76■□□□□ 0.43
PCNX1-202ENST00000439984 GPATCH3Q96I76 525 aa17.76■□□□□ 0.43
PCNX1-202ENST00000439984 ADAMTS8Q9UP79 889 aa17.76■□□□□ 0.43
PCNX1-202ENST00000439984 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
PCNX1-202ENST00000439984 STK31Q9BXU1 1019 aa17.75■□□□□ 0.43
PCNX1-202ENST00000439984 BCAR3O75815 825 aa17.75■□□□□ 0.43
PCNX1-202ENST00000439984 FOSBP53539 338 aa17.75■□□□□ 0.43
PCNX1-202ENST00000439984 RSPH4AQ5TD94 716 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms