RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.89
GARNL3-206ENST00000439286 RBM33Q96EV2 1170 aaKnown RBP20.58■□□□□ 0.89
GARNL3-206ENST00000439286 RIMS2Q9UQ26 1411 aa20.58■□□□□ 0.88
GARNL3-206ENST00000439286 PLEKHG1Q9ULL1 1385 aa20.57■□□□□ 0.88
GARNL3-206ENST00000439286 STRCP1A6NGW2 1772 aa20.56■□□□□ 0.88
GARNL3-206ENST00000439286 ALKQ9UM73 1620 aa20.56■□□□□ 0.88
GARNL3-206ENST00000439286 TBX22Q9Y458 520 aa20.55■□□□□ 0.88
GARNL3-206ENST00000439286 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
GARNL3-206ENST00000439286 MSH6P52701 1360 aa20.54■□□□□ 0.88
GARNL3-206ENST00000439286 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
GARNL3-206ENST00000439286 TET3O43151 1660 aa20.54■□□□□ 0.88
GARNL3-206ENST00000439286 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
GARNL3-206ENST00000439286 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
GARNL3-206ENST00000439286 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
GARNL3-206ENST00000439286 UNC13BO14795 1591 aa20.5■□□□□ 0.87
GARNL3-206ENST00000439286 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
GARNL3-206ENST00000439286 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
GARNL3-206ENST00000439286 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
GARNL3-206ENST00000439286 TMEM131LA2VDJ0 1609 aa20.44■□□□□ 0.86
GARNL3-206ENST00000439286 GCC2Q8IWJ2 1684 aa20.44■□□□□ 0.86
GARNL3-206ENST00000439286 PIK3R4Q99570 1358 aa20.44■□□□□ 0.86
GARNL3-206ENST00000439286 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
GARNL3-206ENST00000439286 ATF3P18847 181 aa20.43■□□□□ 0.86
GARNL3-206ENST00000439286 CADPS2Q86UW7 1296 aa20.43■□□□□ 0.86
GARNL3-206ENST00000439286 NCOA3Q9Y6Q9 1424 aa20.43■□□□□ 0.86
GARNL3-206ENST00000439286 TRIM52Q96A61 297 aa20.42■□□□□ 0.86
GARNL3-206ENST00000439286 C19orf44Q9H6X5 657 aa20.42■□□□□ 0.86
GARNL3-206ENST00000439286 AMOTL2Q9Y2J4 779 aa20.42■□□□□ 0.86
GARNL3-206ENST00000439286 NWD1Q149M9 1564 aa20.41■□□□□ 0.86
GARNL3-206ENST00000439286 E9PCH4 1651 aa20.4■□□□□ 0.86
GARNL3-206ENST00000439286 ADAMTS13Q76LX8 1427 aa20.39■□□□□ 0.85
GARNL3-206ENST00000439286 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
GARNL3-206ENST00000439286 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
GARNL3-206ENST00000439286 XIRP1Q702N8 1843 aaKnown RBP20.34■□□□□ 0.85
GARNL3-206ENST00000439286 JCADQ9P266 1359 aa20.34■□□□□ 0.85
GARNL3-206ENST00000439286 SLC4A1APQ9BWU0 796 aaKnown RBP20.33■□□□□ 0.85
GARNL3-206ENST00000439286 RGS17Q9UGC6 210 aaPredicted RBP20.33■□□□□ 0.85
GARNL3-206ENST00000439286 NAIPQ13075 1403 aa20.33■□□□□ 0.84
GARNL3-206ENST00000439286 TRPM2O94759 1503 aa20.32■□□□□ 0.84
GARNL3-206ENST00000439286 ROBO1Q9Y6N7 1651 aa20.32■□□□□ 0.84
GARNL3-206ENST00000439286 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
GARNL3-206ENST00000439286 PTPRUQ92729 1446 aa20.28■□□□□ 0.84
GARNL3-206ENST00000439286 CHD2O14647 1828 aaKnown RBP20.28■□□□□ 0.84
GARNL3-206ENST00000439286 MEX3CQ5U5Q3 659 aaKnown RBP20.28■□□□□ 0.84
GARNL3-206ENST00000439286 MYO5BQ9ULV0 1848 aa20.27■□□□□ 0.84
GARNL3-206ENST00000439286 HFM1A2PYH4 1435 aa20.27■□□□□ 0.83
GARNL3-206ENST00000439286 METP08581 1390 aa20.26■□□□□ 0.83
GARNL3-206ENST00000439286 SPATA31A6Q5VVP1 1343 aa20.26■□□□□ 0.83
GARNL3-206ENST00000439286 POTEAQ6S8J7 498 aa20.25■□□□□ 0.83
GARNL3-206ENST00000439286 BRINP3Q76B58 766 aa20.25■□□□□ 0.83
GARNL3-206ENST00000439286 RPGRIP1LQ68CZ1 1315 aa20.25■□□□□ 0.83
GARNL3-206ENST00000439286 DCCP43146 1447 aa20.23■□□□□ 0.83
GARNL3-206ENST00000439286 SETBP1Q9Y6X0 1596 aa20.22■□□□□ 0.83
GARNL3-206ENST00000439286 SPHKAPQ2M3C7 1700 aa20.22■□□□□ 0.83
GARNL3-206ENST00000439286 PHLPP1O60346 1717 aa20.2■□□□□ 0.82
GARNL3-206ENST00000439286 ZNF772Q68DY9 489 aaPredicted RBP20.19■□□□□ 0.82
GARNL3-206ENST00000439286 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
GARNL3-206ENST00000439286 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
GARNL3-206ENST00000439286 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
GARNL3-206ENST00000439286 LRRC59Q96AG4 307 aaKnown RBP20.18■□□□□ 0.82
GARNL3-206ENST00000439286 CLTCL1P53675 1640 aa20.17■□□□□ 0.82
GARNL3-206ENST00000439286 FOXD1Q16676 465 aa20.17■□□□□ 0.82
GARNL3-206ENST00000439286 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
GARNL3-206ENST00000439286 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
GARNL3-206ENST00000439286 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
GARNL3-206ENST00000439286 MST1RQ04912 1400 aa20.14■□□□□ 0.81
GARNL3-206ENST00000439286 ADGRL3Q9HAR2 1447 aa20.14■□□□□ 0.81
GARNL3-206ENST00000439286 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
GARNL3-206ENST00000439286 MPHOSPH9Q99550 1183 aa20.14■□□□□ 0.81
GARNL3-206ENST00000439286 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
GARNL3-206ENST00000439286 AHDC1Q5TGY3 1603 aaPredicted RBP20.13■□□□□ 0.81
GARNL3-206ENST00000439286 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
GARNL3-206ENST00000439286 CCDC144AA2RUR9 1427 aa20.12■□□□□ 0.81
GARNL3-206ENST00000439286 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
GARNL3-206ENST00000439286 XRN1Q8IZH2 1706 aaKnown RBP20.1■□□□□ 0.81
GARNL3-206ENST00000439286 DDX17Q92841 729 aaKnown RBP20.09■□□□□ 0.81
GARNL3-206ENST00000439286 PTCH1Q13635 1447 aa20.09■□□□□ 0.81
GARNL3-206ENST00000439286 SETD5Q9C0A6 1442 aa20.09■□□□□ 0.81
GARNL3-206ENST00000439286 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.81
GARNL3-206ENST00000439286 RXRBP28702 533 aa20.08■□□□□ 0.81
GARNL3-206ENST00000439286 LRP6O75581 1613 aa20.07■□□□□ 0.8
GARNL3-206ENST00000439286 KIF1BO60333 1816 aa20.06■□□□□ 0.8
GARNL3-206ENST00000439286 STK26Q9P289 416 aa20.06■□□□□ 0.8
GARNL3-206ENST00000439286 ANKRD30BQ9BXX2 1392 aa20.06■□□□□ 0.8
GARNL3-206ENST00000439286 C1orf167Q5SNV9 1468 aa20.05■□□□□ 0.8
GARNL3-206ENST00000439286 ADGRF5Q8IZF2 1346 aa20.05■□□□□ 0.8
GARNL3-206ENST00000439286 C8orf37Q96NL8 207 aa20.05■□□□□ 0.8
GARNL3-206ENST00000439286 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
GARNL3-206ENST00000439286 ESCO1Q5FWF5 840 aa20.03■□□□□ 0.8
GARNL3-206ENST00000439286 AFF2P51816 1311 aa20.02■□□□□ 0.8
GARNL3-206ENST00000439286 PNPLA6Q8IY17 1366 aa20.01■□□□□ 0.79
GARNL3-206ENST00000439286 NGLY1Q96IV0 654 aa20.01■□□□□ 0.79
GARNL3-206ENST00000439286 ADAMTS2O95450 1211 aa20■□□□□ 0.79
GARNL3-206ENST00000439286 PRAG1Q86YV5 1406 aa20■□□□□ 0.79
GARNL3-206ENST00000439286 SHPRHQ149N8 1683 aa20■□□□□ 0.79
GARNL3-206ENST00000439286 SOS2Q07890 1332 aaPredicted RBP20■□□□□ 0.79
GARNL3-206ENST00000439286 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
GARNL3-206ENST00000439286 QTRT2Q9H974 415 aaKnown RBP19.99■□□□□ 0.79
GARNL3-206ENST00000439286 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
GARNL3-206ENST00000439286 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms