RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TRAK2O60296 914 aa17.09■□□□□ 0.33
ACTN1-204ENST00000438964 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-204ENST00000438964 ARID3AQ99856 593 aa17.09■□□□□ 0.33
ACTN1-204ENST00000438964 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
ACTN1-204ENST00000438964 ARHGEF12Q9NZN5 1544 aa17.07■□□□□ 0.32
ACTN1-204ENST00000438964 DISP1Q96F81 1524 aa17.07■□□□□ 0.32
ACTN1-204ENST00000438964 TBC1D32Q96NH3 1257 aa17.07■□□□□ 0.32
ACTN1-204ENST00000438964 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
ACTN1-204ENST00000438964 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
ACTN1-204ENST00000438964 EIF3AQ14152 1382 aaKnown RBP17.06■□□□□ 0.32
ACTN1-204ENST00000438964 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
ACTN1-204ENST00000438964 A2MP01023 1474 aa17.05■□□□□ 0.32
ACTN1-204ENST00000438964 NLRP1Q9C000 1473 aa17.04■□□□□ 0.32
ACTN1-204ENST00000438964 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
ACTN1-204ENST00000438964 MAPK8IP3Q9UPT6 1336 aa17.04■□□□□ 0.32
ACTN1-204ENST00000438964 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
ACTN1-204ENST00000438964 E9PSI1 815 aa17.03■□□□□ 0.32
ACTN1-204ENST00000438964 RAPGEF6Q8TEU7 1601 aa17.03■□□□□ 0.32
ACTN1-204ENST00000438964 CGNL1Q0VF96 1302 aa17.03■□□□□ 0.32
ACTN1-204ENST00000438964 CLCN1P35523 988 aa17.02■□□□□ 0.32
ACTN1-204ENST00000438964 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
ACTN1-204ENST00000438964 ADGRL2O95490 1459 aa17.02■□□□□ 0.32
ACTN1-204ENST00000438964 TRPM1Q7Z4N2 1603 aa17.02■□□□□ 0.32
ACTN1-204ENST00000438964 FSD2A1L4K1 749 aa17.02■□□□□ 0.32
ACTN1-204ENST00000438964 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
ACTN1-204ENST00000438964 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
ACTN1-204ENST00000438964 CEP170Q5SW79 1584 aa17.02■□□□□ 0.32
ACTN1-204ENST00000438964 GAS2L3Q86XJ1 694 aa17.01■□□□□ 0.31
ACTN1-204ENST00000438964 GRPEL1Q9HAV7 217 aa17.01■□□□□ 0.31
ACTN1-204ENST00000438964 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
ACTN1-204ENST00000438964 C22orf23Q9BZE7 217 aa17■□□□□ 0.31
ACTN1-204ENST00000438964 KIAA0556O60303 1618 aa17■□□□□ 0.31
ACTN1-204ENST00000438964 ESPNB1AK53 854 aa16.99■□□□□ 0.31
ACTN1-204ENST00000438964 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
ACTN1-204ENST00000438964 FAM135AQ9P2D6 1515 aa16.99■□□□□ 0.31
ACTN1-204ENST00000438964 ZBTB7CA1YPR0 619 aa16.99■□□□□ 0.31
ACTN1-204ENST00000438964 WDR7Q9Y4E6 1490 aa16.98■□□□□ 0.31
ACTN1-204ENST00000438964 RBM10P98175 930 aaKnown RBP16.98■□□□□ 0.31
ACTN1-204ENST00000438964 TRIM44Q96DX7 344 aaPredicted RBP16.98■□□□□ 0.31
ACTN1-204ENST00000438964 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
ACTN1-204ENST00000438964 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
ACTN1-204ENST00000438964 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
ACTN1-204ENST00000438964 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
ACTN1-204ENST00000438964 CHMP7Q8WUX9 453 aaPredicted RBP16.96■□□□□ 0.31
ACTN1-204ENST00000438964 ADAMTS12P58397 1594 aa16.96■□□□□ 0.31
ACTN1-204ENST00000438964 CHMP5Q9NZZ3 219 aa16.96■□□□□ 0.3
ACTN1-204ENST00000438964 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
ACTN1-204ENST00000438964 MRE11P49959 708 aa16.94■□□□□ 0.3
ACTN1-204ENST00000438964 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
ACTN1-204ENST00000438964 CARD14Q9BXL6 1004 aa16.94■□□□□ 0.3
ACTN1-204ENST00000438964 GPRASP1Q5JY77 1395 aa16.93■□□□□ 0.3
ACTN1-204ENST00000438964 HSCBQ8IWL3 235 aa16.93■□□□□ 0.3
ACTN1-204ENST00000438964 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
ACTN1-204ENST00000438964 PMFBP1Q8TBY8 1022 aa16.93■□□□□ 0.3
ACTN1-204ENST00000438964 ITSN2Q9NZM3 1697 aa16.92■□□□□ 0.3
ACTN1-204ENST00000438964 RRP9O43818 475 aaKnown RBP16.92■□□□□ 0.3
ACTN1-204ENST00000438964 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
ACTN1-204ENST00000438964 CDC42BPAQ5VT25 1732 aa16.92■□□□□ 0.3
ACTN1-204ENST00000438964 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
ACTN1-204ENST00000438964 TNPO1Q92973 898 aaKnown RBP16.91■□□□□ 0.3
ACTN1-204ENST00000438964 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-204ENST00000438964 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-204ENST00000438964 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
ACTN1-204ENST00000438964 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
ACTN1-204ENST00000438964 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
ACTN1-204ENST00000438964 INSRP06213 1382 aa16.9■□□□□ 0.3
ACTN1-204ENST00000438964 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
ACTN1-204ENST00000438964 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
ACTN1-204ENST00000438964 CD2BP2O95400 341 aaKnown RBP16.89■□□□□ 0.29
ACTN1-204ENST00000438964 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.29
ACTN1-204ENST00000438964 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
ACTN1-204ENST00000438964 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
ACTN1-204ENST00000438964 PTPRGP23470 1445 aa16.88■□□□□ 0.29
ACTN1-204ENST00000438964 CFAP70Q5T0N1 1121 aa16.87■□□□□ 0.29
ACTN1-204ENST00000438964 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
ACTN1-204ENST00000438964 ZNF692Q9BU19 519 aaPredicted RBP16.86■□□□□ 0.29
ACTN1-204ENST00000438964 ASXL1Q8IXJ9 1541 aa16.86■□□□□ 0.29
ACTN1-204ENST00000438964 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
ACTN1-204ENST00000438964 FAM13BQ9NYF5 915 aa16.85■□□□□ 0.29
ACTN1-204ENST00000438964 MAGI1Q96QZ7 1491 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-204ENST00000438964 SMC4Q9NTJ3 1288 aa16.84■□□□□ 0.29
ACTN1-204ENST00000438964 DDX11L8A8MPP1 907 aa16.83■□□□□ 0.29
ACTN1-204ENST00000438964 SSFA2P28290 1259 aa16.83■□□□□ 0.29
ACTN1-204ENST00000438964 MVPQ14764 893 aaKnown RBP16.83■□□□□ 0.29
ACTN1-204ENST00000438964 MYO5CQ9NQX4 1742 aa16.83■□□□□ 0.28
ACTN1-204ENST00000438964 CHAMP1Q96JM3 812 aa16.83■□□□□ 0.28
ACTN1-204ENST00000438964 SLC12A5Q9H2X9 1139 aa16.83■□□□□ 0.28
ACTN1-204ENST00000438964 PIK3C2GO75747 1445 aa16.82■□□□□ 0.28
ACTN1-204ENST00000438964 DZIP1LQ8IYY4 767 aaKnown RBP16.82■□□□□ 0.28
ACTN1-204ENST00000438964 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
ACTN1-204ENST00000438964 RTEL1-TNFRSF6BF6WH68 1400 aa16.82■□□□□ 0.28
ACTN1-204ENST00000438964 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-204ENST00000438964 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTN1-204ENST00000438964 ATP10BO94823 1461 aa16.81■□□□□ 0.28
ACTN1-204ENST00000438964 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
ACTN1-204ENST00000438964 MTHFSP49914 203 aa16.81■□□□□ 0.28
ACTN1-204ENST00000438964 R3HCC1Q9Y3T6 440 aaKnown RBP16.8■□□□□ 0.28
ACTN1-204ENST00000438964 TRIM27P14373 513 aa16.8■□□□□ 0.28
ACTN1-204ENST00000438964 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
ACTN1-204ENST00000438964 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms