RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 ATF3P18847 181 aa13.68□□□□□ -0.22
SCRN1-208ENST00000438497 C19orf44Q9H6X5 657 aa13.68□□□□□ -0.22
SCRN1-208ENST00000438497 KIF15Q9NS87 1388 aa13.68□□□□□ -0.22
SCRN1-208ENST00000438497 COL16A1Q07092 1604 aaPredicted RBP13.68□□□□□ -0.22
SCRN1-208ENST00000438497 MYOM3Q5VTT5 1437 aa13.67□□□□□ -0.22
SCRN1-208ENST00000438497 KDM5AP29375 1690 aaKnown RBP13.67□□□□□ -0.22
SCRN1-208ENST00000438497 PPP1R15AO75807 674 aaPredicted RBP13.67□□□□□ -0.22
SCRN1-208ENST00000438497 CADPS2Q86UW7 1296 aa13.67□□□□□ -0.22
SCRN1-208ENST00000438497 TBX22Q9Y458 520 aa13.67□□□□□ -0.22
SCRN1-208ENST00000438497 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
SCRN1-208ENST00000438497 QTRT2Q9H974 415 aaKnown RBP13.66□□□□□ -0.22
SCRN1-208ENST00000438497 AFF2P51816 1311 aa13.65□□□□□ -0.22
SCRN1-208ENST00000438497 NUTM2DQ5VT03 806 aaPredicted RBP13.65□□□□□ -0.22
SCRN1-208ENST00000438497 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
SCRN1-208ENST00000438497 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
SCRN1-208ENST00000438497 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
SCRN1-208ENST00000438497 KANK4Q5T7N3 995 aaPredicted RBP13.64□□□□□ -0.23
SCRN1-208ENST00000438497 ERBINQ96RT1 1412 aa13.64□□□□□ -0.23
SCRN1-208ENST00000438497 RBM6P78332 1123 aaKnown RBP13.63□□□□□ -0.23
SCRN1-208ENST00000438497 CHIC2Q9UKJ5 165 aa13.63□□□□□ -0.23
SCRN1-208ENST00000438497 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
SCRN1-208ENST00000438497 SHPRHQ149N8 1683 aa13.62□□□□□ -0.23
SCRN1-208ENST00000438497 FOXD1Q16676 465 aa13.61□□□□□ -0.23
SCRN1-208ENST00000438497 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
SCRN1-208ENST00000438497 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCRN1-208ENST00000438497 NOS1P29475 1434 aa13.61□□□□□ -0.23
SCRN1-208ENST00000438497 ABCC5O15440 1437 aa13.6□□□□□ -0.23
SCRN1-208ENST00000438497 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
SCRN1-208ENST00000438497 LRRC59Q96AG4 307 aaKnown RBP13.6□□□□□ -0.23
SCRN1-208ENST00000438497 C8orf37Q96NL8 207 aa13.6□□□□□ -0.23
SCRN1-208ENST00000438497 AHDC1Q5TGY3 1603 aaPredicted RBP13.6□□□□□ -0.23
SCRN1-208ENST00000438497 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
SCRN1-208ENST00000438497 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
SCRN1-208ENST00000438497 RIMS2Q9UQ26 1411 aa13.59□□□□□ -0.23
SCRN1-208ENST00000438497 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
SCRN1-208ENST00000438497 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
SCRN1-208ENST00000438497 NGLY1Q96IV0 654 aa13.58□□□□□ -0.24
SCRN1-208ENST00000438497 AMOTL2Q9Y2J4 779 aa13.58□□□□□ -0.24
SCRN1-208ENST00000438497 ZFYVE9O95405 1425 aa13.57□□□□□ -0.24
SCRN1-208ENST00000438497 ANKRD30AQ9BXX3 1397 aa13.57□□□□□ -0.24
SCRN1-208ENST00000438497 MYO5BQ9ULV0 1848 aa13.56□□□□□ -0.24
SCRN1-208ENST00000438497 RGS12O14924 1447 aa13.55□□□□□ -0.24
SCRN1-208ENST00000438497 PIK3R4Q99570 1358 aa13.54□□□□□ -0.24
SCRN1-208ENST00000438497 DAPK1P53355 1430 aa13.54□□□□□ -0.24
SCRN1-208ENST00000438497 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
SCRN1-208ENST00000438497 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
SCRN1-208ENST00000438497 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
SCRN1-208ENST00000438497 DDX17Q92841 729 aaKnown RBP13.52□□□□□ -0.25
SCRN1-208ENST00000438497 ATAD2Q6PL18 1390 aa13.52□□□□□ -0.25
SCRN1-208ENST00000438497 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.25
SCRN1-208ENST00000438497 CROCC2H7BZ55 1655 aa13.51□□□□□ -0.25
SCRN1-208ENST00000438497 VPS8Q8N3P4 1428 aa13.51□□□□□ -0.25
SCRN1-208ENST00000438497 GCC2Q8IWJ2 1684 aa13.5□□□□□ -0.25
SCRN1-208ENST00000438497 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
SCRN1-208ENST00000438497 PTPN23Q9H3S7 1636 aa13.5□□□□□ -0.25
SCRN1-208ENST00000438497 APLP2Q06481 763 aa13.5□□□□□ -0.25
SCRN1-208ENST00000438497 CCDC125Q86Z20 511 aa13.5□□□□□ -0.25
SCRN1-208ENST00000438497 USP21Q9UK80 565 aa13.5□□□□□ -0.25
SCRN1-208ENST00000438497 RPRD2Q5VT52 1461 aaKnown RBP13.49□□□□□ -0.25
SCRN1-208ENST00000438497 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
SCRN1-208ENST00000438497 PTPRUQ92729 1446 aa13.48□□□□□ -0.25
SCRN1-208ENST00000438497 PNPLA6Q8IY17 1366 aa13.48□□□□□ -0.25
SCRN1-208ENST00000438497 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
SCRN1-208ENST00000438497 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
SCRN1-208ENST00000438497 DCCP43146 1447 aa13.47□□□□□ -0.25
SCRN1-208ENST00000438497 MST1RQ04912 1400 aa13.47□□□□□ -0.25
SCRN1-208ENST00000438497 TRPM2O94759 1503 aa13.45□□□□□ -0.26
SCRN1-208ENST00000438497 LOC105371045A0A1W2PR82 267 aa13.45□□□□□ -0.26
SCRN1-208ENST00000438497 NHSL1Q5SYE7 1610 aa13.45□□□□□ -0.26
SCRN1-208ENST00000438497 FNBP4Q8N3X1 1017 aaPredicted RBP13.44□□□□□ -0.26
SCRN1-208ENST00000438497 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
SCRN1-208ENST00000438497 ANKRD50Q9ULJ7 1429 aa13.43□□□□□ -0.26
SCRN1-208ENST00000438497 FAM50AQ14320 339 aaKnown RBP13.42□□□□□ -0.26
SCRN1-208ENST00000438497 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.26
SCRN1-208ENST00000438497 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
SCRN1-208ENST00000438497 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
SCRN1-208ENST00000438497 ADGRL2O95490 1459 aa13.39□□□□□ -0.27
SCRN1-208ENST00000438497 UNC13BO14795 1591 aa13.38□□□□□ -0.27
SCRN1-208ENST00000438497 METP08581 1390 aa13.38□□□□□ -0.27
SCRN1-208ENST00000438497 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
SCRN1-208ENST00000438497 ATRNO75882 1429 aa13.38□□□□□ -0.27
SCRN1-208ENST00000438497 PTCH1Q13635 1447 aa13.38□□□□□ -0.27
SCRN1-208ENST00000438497 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
SCRN1-208ENST00000438497 ADGRL3Q9HAR2 1447 aa13.37□□□□□ -0.27
SCRN1-208ENST00000438497 E9PCH4 1651 aa13.36□□□□□ -0.27
SCRN1-208ENST00000438497 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
SCRN1-208ENST00000438497 SF3B2Q13435 895 aaKnown RBP13.35□□□□□ -0.27
SCRN1-208ENST00000438497 DEFB132Q7Z7B7 95 aa13.35□□□□□ -0.27
SCRN1-208ENST00000438497 BCL9LQ86UU0 1499 aa13.33□□□□□ -0.28
SCRN1-208ENST00000438497 NUP155O75694 1391 aa13.32□□□□□ -0.28
SCRN1-208ENST00000438497 NRXN3Q9Y4C0 1643 aa13.32□□□□□ -0.28
SCRN1-208ENST00000438497 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
SCRN1-208ENST00000438497 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
SCRN1-208ENST00000438497 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
SCRN1-208ENST00000438497 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
SCRN1-208ENST00000438497 LAMC1P11047 1609 aa13.3□□□□□ -0.28
SCRN1-208ENST00000438497 FOXO3O43524 673 aa13.29□□□□□ -0.28
SCRN1-208ENST00000438497 NPHP3Q7Z494 1330 aa13.29□□□□□ -0.28
SCRN1-208ENST00000438497 PSDA5PKW4 1024 aaPredicted RBP13.28□□□□□ -0.28
SCRN1-208ENST00000438497 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms