RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 NOS1P29475 1434 aa14.16□□□□□ -0.14
CUBN-204ENST00000438254 MROH2AA6NES4 1674 aa14.15□□□□□ -0.14
CUBN-204ENST00000438254 CNTLNQ9NXG0 1405 aa14.14□□□□□ -0.15
CUBN-204ENST00000438254 TIMELESSQ9UNS1 1208 aa14.13□□□□□ -0.15
CUBN-204ENST00000438254 ADAMTSL3P82987 1691 aa14.13□□□□□ -0.15
CUBN-204ENST00000438254 SYNMO15061 1565 aa14.13□□□□□ -0.15
CUBN-204ENST00000438254 PIK3C2BO00750 1634 aa14.12□□□□□ -0.15
CUBN-204ENST00000438254 CLTCL1P53675 1640 aa14.12□□□□□ -0.15
CUBN-204ENST00000438254 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
CUBN-204ENST00000438254 SPATA31D1Q6ZQQ2 1576 aa14.12□□□□□ -0.15
CUBN-204ENST00000438254 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
CUBN-204ENST00000438254 ARID4BQ4LE39 1312 aaPredicted RBP14.12□□□□□ -0.15
CUBN-204ENST00000438254 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
CUBN-204ENST00000438254 MLECQ14165 292 aa14.11□□□□□ -0.15
CUBN-204ENST00000438254 ERVK-7P63135 1459 aa14.11□□□□□ -0.15
CUBN-204ENST00000438254 FER1L4A9Z1Z3 1794 aa14.1□□□□□ -0.15
CUBN-204ENST00000438254 ZMYM3Q14202 1370 aa14.09□□□□□ -0.15
CUBN-204ENST00000438254 UGGT1Q9NYU2 1555 aa14.09□□□□□ -0.15
CUBN-204ENST00000438254 SPATA31E1Q6ZUB1 1445 aa14.09□□□□□ -0.15
CUBN-204ENST00000438254 NEUROD1Q13562 356 aa14.09□□□□□ -0.15
CUBN-204ENST00000438254 MADDQ8WXG6 1647 aa14.08□□□□□ -0.16
CUBN-204ENST00000438254 C3P01024 1663 aa14.07□□□□□ -0.16
CUBN-204ENST00000438254 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
CUBN-204ENST00000438254 TONSLQ96HA7 1378 aa14.06□□□□□ -0.16
CUBN-204ENST00000438254 ADGRB3O60242 1522 aa14.05□□□□□ -0.16
CUBN-204ENST00000438254 CFAP65Q6ZU64 1925 aaKnown RBP14.04□□□□□ -0.16
CUBN-204ENST00000438254 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
CUBN-204ENST00000438254 L3MBTL2Q969R5 705 aa14.04□□□□□ -0.16
CUBN-204ENST00000438254 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
CUBN-204ENST00000438254 SLC52A1Q9NWF4 448 aa14.03□□□□□ -0.16
CUBN-204ENST00000438254 RIMS1Q86UR5 1692 aaKnown RBP14.03□□□□□ -0.16
CUBN-204ENST00000438254 ESF1Q9H501 851 aaKnown RBP14.02□□□□□ -0.17
CUBN-204ENST00000438254 KIF1BO60333 1816 aa14.01□□□□□ -0.17
CUBN-204ENST00000438254 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
CUBN-204ENST00000438254 GABBR2O75899 941 aa14.01□□□□□ -0.17
CUBN-204ENST00000438254 IDI1Q13907 227 aa14.01□□□□□ -0.17
CUBN-204ENST00000438254 UHRF1BP1Q6BDS2 1440 aa14□□□□□ -0.17
CUBN-204ENST00000438254 CHADLQ6NUI6 762 aa14□□□□□ -0.17
CUBN-204ENST00000438254 IFT172Q9UG01 1749 aa14□□□□□ -0.17
CUBN-204ENST00000438254 TNRQ92752 1358 aa13.98□□□□□ -0.17
CUBN-204ENST00000438254 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
CUBN-204ENST00000438254 CEBPAP49715 358 aaPredicted RBP13.98□□□□□ -0.17
CUBN-204ENST00000438254 NLRP1Q9C000 1473 aa13.97□□□□□ -0.17
CUBN-204ENST00000438254 A2ML1A8K2U0 1454 aa13.96□□□□□ -0.17
CUBN-204ENST00000438254 PTPRMP28827 1452 aa13.96□□□□□ -0.17
CUBN-204ENST00000438254 MYOM2P54296 1465 aa13.96□□□□□ -0.17
CUBN-204ENST00000438254 NEXMIFQ5QGS0 1516 aa13.95□□□□□ -0.18
CUBN-204ENST00000438254 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
CUBN-204ENST00000438254 NBPF8Q3BBV2 869 aa13.95□□□□□ -0.18
CUBN-204ENST00000438254 PPLO60437 1756 aa13.95□□□□□ -0.18
CUBN-204ENST00000438254 MYO5BQ9ULV0 1848 aa13.94□□□□□ -0.18
CUBN-204ENST00000438254 MYO3AQ8NEV4 1616 aa13.94□□□□□ -0.18
CUBN-204ENST00000438254 RGL3Q3MIN7 710 aa13.94□□□□□ -0.18
CUBN-204ENST00000438254 PRAG1Q86YV5 1406 aa13.94□□□□□ -0.18
CUBN-204ENST00000438254 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
CUBN-204ENST00000438254 STAC3Q96MF2 364 aa13.94□□□□□ -0.18
CUBN-204ENST00000438254 RPGRIP1LQ68CZ1 1315 aa13.93□□□□□ -0.18
CUBN-204ENST00000438254 DCAF11Q8TEB1 546 aa13.93□□□□□ -0.18
CUBN-204ENST00000438254 ZFYVE9O95405 1425 aa13.92□□□□□ -0.18
CUBN-204ENST00000438254 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
CUBN-204ENST00000438254 RALGAPBQ86X10 1494 aa13.91□□□□□ -0.18
CUBN-204ENST00000438254 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
CUBN-204ENST00000438254 TRPM1Q7Z4N2 1603 aa13.9□□□□□ -0.18
CUBN-204ENST00000438254 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
CUBN-204ENST00000438254 ARHGAP23Q9P227 1491 aa13.89□□□□□ -0.19
CUBN-204ENST00000438254 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
CUBN-204ENST00000438254 SLIT1O75093 1534 aa13.88□□□□□ -0.19
CUBN-204ENST00000438254 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
CUBN-204ENST00000438254 ADGRF5Q8IZF2 1346 aa13.88□□□□□ -0.19
CUBN-204ENST00000438254 KIAA1210Q9ULL0 1709 aa13.87□□□□□ -0.19
CUBN-204ENST00000438254 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
CUBN-204ENST00000438254 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
CUBN-204ENST00000438254 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
CUBN-204ENST00000438254 RIMS2Q9UQ26 1411 aa13.86□□□□□ -0.19
CUBN-204ENST00000438254 LAMC1P11047 1609 aa13.86□□□□□ -0.19
CUBN-204ENST00000438254 TMEM2Q9UHN6 1383 aa13.85□□□□□ -0.19
CUBN-204ENST00000438254 CLCN6P51797 869 aa13.85□□□□□ -0.19
CUBN-204ENST00000438254 ZNF326Q5BKZ1 582 aaKnown RBP13.85□□□□□ -0.19
CUBN-204ENST00000438254 LHX8Q68G74 356 aa13.85□□□□□ -0.19
CUBN-204ENST00000438254 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
CUBN-204ENST00000438254 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
CUBN-204ENST00000438254 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
CUBN-204ENST00000438254 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
CUBN-204ENST00000438254 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
CUBN-204ENST00000438254 ADGRB1O14514 1584 aa13.82□□□□□ -0.2
CUBN-204ENST00000438254 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
CUBN-204ENST00000438254 NBPF1Q3BBV0 1214 aa13.81□□□□□ -0.2
CUBN-204ENST00000438254 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
CUBN-204ENST00000438254 C14orf93Q9H972 538 aaKnown RBP13.8□□□□□ -0.2
CUBN-204ENST00000438254 ASXL1Q8IXJ9 1541 aa13.8□□□□□ -0.2
CUBN-204ENST00000438254 LTKP29376 864 aa13.79□□□□□ -0.2
CUBN-204ENST00000438254 THEMISQ8N1K5 641 aaPredicted RBP13.79□□□□□ -0.2
CUBN-204ENST00000438254 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.79□□□□□ -0.2
CUBN-204ENST00000438254 ROCK2O75116 1388 aaKnown RBP13.79□□□□□ -0.2
CUBN-204ENST00000438254 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
CUBN-204ENST00000438254 CFAP70Q5T0N1 1121 aa13.78□□□□□ -0.2
CUBN-204ENST00000438254 NUTM2DQ5VT03 806 aaPredicted RBP13.78□□□□□ -0.2
CUBN-204ENST00000438254 MED14O60244 1454 aa13.78□□□□□ -0.2
CUBN-204ENST00000438254 ALKQ9UM73 1620 aa13.78□□□□□ -0.2
CUBN-204ENST00000438254 PLEKHG1Q9ULL1 1385 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms