RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 FAM69CQ0P6D2 419 aa12.74□□□□□ -0.37
SHPRH-206ENST00000438092 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
SHPRH-206ENST00000438092 EVC2Q86UK5 1308 aa12.73□□□□□ -0.37
SHPRH-206ENST00000438092 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
SHPRH-206ENST00000438092 CCDC144AA2RUR9 1427 aa12.73□□□□□ -0.37
SHPRH-206ENST00000438092 BCL11BQ9C0K0 894 aaPredicted RBP12.73□□□□□ -0.37
SHPRH-206ENST00000438092 GOLGA6L1Q8N7Z2 621 aa12.72□□□□□ -0.37
SHPRH-206ENST00000438092 PTMSP20962 102 aa12.72□□□□□ -0.37
SHPRH-206ENST00000438092 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
SHPRH-206ENST00000438092 CCDC18Q5T9S5 1454 aa12.72□□□□□ -0.37
SHPRH-206ENST00000438092 ATF3P18847 181 aa12.72□□□□□ -0.37
SHPRH-206ENST00000438092 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
SHPRH-206ENST00000438092 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
SHPRH-206ENST00000438092 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
SHPRH-206ENST00000438092 CRBNQ96SW2 442 aa12.72□□□□□ -0.37
SHPRH-206ENST00000438092 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
SHPRH-206ENST00000438092 TIMELESSQ9UNS1 1208 aa12.71□□□□□ -0.37
SHPRH-206ENST00000438092 IFIT2P09913 472 aaKnown RBP12.71□□□□□ -0.37
SHPRH-206ENST00000438092 APAF1O14727 1248 aa12.71□□□□□ -0.38
SHPRH-206ENST00000438092 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-206ENST00000438092 FKBP5Q13451 457 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-206ENST00000438092 RIPK4P57078 832 aa12.7□□□□□ -0.38
SHPRH-206ENST00000438092 TSR1Q2NL82 804 aaKnown RBP12.7□□□□□ -0.38
SHPRH-206ENST00000438092 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
SHPRH-206ENST00000438092 TRIM29Q14134 588 aa12.69□□□□□ -0.38
SHPRH-206ENST00000438092 NLRP2Q9NX02 1062 aa12.69□□□□□ -0.38
SHPRH-206ENST00000438092 KIF3AQ9Y496 699 aa12.69□□□□□ -0.38
SHPRH-206ENST00000438092 KIF15Q9NS87 1388 aa12.69□□□□□ -0.38
SHPRH-206ENST00000438092 GOLGA6L19H0YKK7 550 aa12.69□□□□□ -0.38
SHPRH-206ENST00000438092 ZNF592Q92610 1267 aa12.68□□□□□ -0.38
SHPRH-206ENST00000438092 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
SHPRH-206ENST00000438092 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
SHPRH-206ENST00000438092 NUTM2AQ8IVF1 878 aaPredicted RBP12.68□□□□□ -0.38
SHPRH-206ENST00000438092 EXOC6Q8TAG9 804 aa12.68□□□□□ -0.38
SHPRH-206ENST00000438092 ZKSCAN2Q63HK3 967 aa12.68□□□□□ -0.38
SHPRH-206ENST00000438092 RIC3Q7Z5B4 369 aa12.68□□□□□ -0.38
SHPRH-206ENST00000438092 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
SHPRH-206ENST00000438092 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
SHPRH-206ENST00000438092 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
SHPRH-206ENST00000438092 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
SHPRH-206ENST00000438092 BECN2A8MW95 431 aa12.67□□□□□ -0.38
SHPRH-206ENST00000438092 CCDC43Q96MW1 224 aaKnown RBP12.67□□□□□ -0.38
SHPRH-206ENST00000438092 CPLX1O14810 134 aa12.67□□□□□ -0.38
SHPRH-206ENST00000438092 PHF14O94880 888 aa12.66□□□□□ -0.38
SHPRH-206ENST00000438092 TPM2P07951 284 aa12.66□□□□□ -0.38
SHPRH-206ENST00000438092 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
SHPRH-206ENST00000438092 G3BP1Q13283 466 aaKnown RBP eCLIP12.66□□□□□ -0.38
SHPRH-206ENST00000438092 RAPGEF4Q8WZA2 1011 aa12.66□□□□□ -0.38
SHPRH-206ENST00000438092 DDX49Q9Y6V7 483 aaKnown RBP12.66□□□□□ -0.38
SHPRH-206ENST00000438092 TNNT3P45378 269 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-206ENST00000438092 STK11IPQ8N1F8 1099 aa12.66□□□□□ -0.38
SHPRH-206ENST00000438092 IKQ13123 557 aaPredicted RBP12.65□□□□□ -0.38
SHPRH-206ENST00000438092 TMEM132EQ6IEE7 984 aa12.65□□□□□ -0.38
SHPRH-206ENST00000438092 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
SHPRH-206ENST00000438092 IPO9Q96P70 1041 aaKnown RBP12.65□□□□□ -0.38
SHPRH-206ENST00000438092 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
SHPRH-206ENST00000438092 TRDNQ13061 729 aa12.64□□□□□ -0.39
SHPRH-206ENST00000438092 WASHC4Q2M389 1173 aa12.64□□□□□ -0.39
SHPRH-206ENST00000438092 GGNBP2Q9H3C7 697 aa12.64□□□□□ -0.39
SHPRH-206ENST00000438092 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
SHPRH-206ENST00000438092 ERICH2A1L162 156 aa12.64□□□□□ -0.39
SHPRH-206ENST00000438092 RBM42Q9BTD8 480 aaKnown RBP12.64□□□□□ -0.39
SHPRH-206ENST00000438092 PTPRGP23470 1445 aa12.63□□□□□ -0.39
SHPRH-206ENST00000438092 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
SHPRH-206ENST00000438092 VPS37CA5D8V6 355 aaPredicted RBP12.63□□□□□ -0.39
SHPRH-206ENST00000438092 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
SHPRH-206ENST00000438092 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
SHPRH-206ENST00000438092 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
SHPRH-206ENST00000438092 PIP4K2BP78356 416 aa12.62□□□□□ -0.39
SHPRH-206ENST00000438092 BICD2Q8TD16 824 aa12.62□□□□□ -0.39
SHPRH-206ENST00000438092 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
SHPRH-206ENST00000438092 E9PSI1 815 aa12.62□□□□□ -0.39
SHPRH-206ENST00000438092 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
SHPRH-206ENST00000438092 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
SHPRH-206ENST00000438092 RUFY2Q8WXA3 655 aa12.61□□□□□ -0.39
SHPRH-206ENST00000438092 TPM1P09493 284 aa12.61□□□□□ -0.39
SHPRH-206ENST00000438092 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-206ENST00000438092 USP47Q96K76 1375 aa12.61□□□□□ -0.39
SHPRH-206ENST00000438092 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
SHPRH-206ENST00000438092 NLRP6P59044 892 aa12.6□□□□□ -0.39
SHPRH-206ENST00000438092 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
SHPRH-206ENST00000438092 ABTB2Q8N961 1025 aa12.6□□□□□ -0.39
SHPRH-206ENST00000438092 DCAF8L1A6NGE4 600 aa12.59□□□□□ -0.39
SHPRH-206ENST00000438092 CENPQQ7L2Z9 268 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-206ENST00000438092 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
SHPRH-206ENST00000438092 PHLDB1Q86UU1 1377 aa12.59□□□□□ -0.39
SHPRH-206ENST00000438092 PDE3BQ13370 1112 aa12.59□□□□□ -0.39
SHPRH-206ENST00000438092 ZNF644Q9H582 1327 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-206ENST00000438092 ATP2B2Q01814 1243 aa12.58□□□□□ -0.39
SHPRH-206ENST00000438092 CHMP4CQ96CF2 233 aa12.58□□□□□ -0.39
SHPRH-206ENST00000438092 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.58□□□□□ -0.393e-9■■■■■ 73.7
SHPRH-206ENST00000438092 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.4
SHPRH-206ENST00000438092 PDE4AP27815 886 aa12.58□□□□□ -0.4
SHPRH-206ENST00000438092 TMEM132AQ24JP5 1023 aa12.58□□□□□ -0.4
SHPRH-206ENST00000438092 ZFYVE27Q5T4F4 411 aa12.58□□□□□ -0.4
SHPRH-206ENST00000438092 RRP12Q5JTH9 1297 aaKnown RBP12.57□□□□□ -0.4
SHPRH-206ENST00000438092 DNAJC2Q99543 621 aaKnown RBP12.57□□□□□ -0.4
SHPRH-206ENST00000438092 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
SHPRH-206ENST00000438092 DZIP1LQ8IYY4 767 aaKnown RBP12.57□□□□□ -0.4
SHPRH-206ENST00000438092 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms