RNA–Protein interactions for RNA: ENST00000438023.5

KDM4C-206, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 4,022 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-206ENST00000438023 RRP7AQ9Y3A4 280 aaKnown RBP16.55■□□□□ 0.24
KDM4C-206ENST00000438023 APAF1O14727 1248 aa16.55■□□□□ 0.24
KDM4C-206ENST00000438023 NUCB2P80303 420 aa16.55■□□□□ 0.24
KDM4C-206ENST00000438023 KIF3AQ9Y496 699 aa16.55■□□□□ 0.24
KDM4C-206ENST00000438023 ANKRD45Q5TZF3 282 aa16.54■□□□□ 0.24
KDM4C-206ENST00000438023 TAF3Q5VWG9 929 aa16.54■□□□□ 0.24
KDM4C-206ENST00000438023 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
KDM4C-206ENST00000438023 PRPF40AO75400 957 aaKnown RBP16.54■□□□□ 0.24
KDM4C-206ENST00000438023 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
KDM4C-206ENST00000438023 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
KDM4C-206ENST00000438023 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
KDM4C-206ENST00000438023 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
KDM4C-206ENST00000438023 IGSF3O75054 1194 aa16.52■□□□□ 0.24
KDM4C-206ENST00000438023 CFDP1Q9UEE9 299 aaPredicted RBP16.51■□□□□ 0.23
KDM4C-206ENST00000438023 U2AF1L5P0DN76 240 aaPredicted RBP16.51■□□□□ 0.23
KDM4C-206ENST00000438023 U2AF1Q01081 240 aaKnown RBP eCLIP16.51■□□□□ 0.23
KDM4C-206ENST00000438023 MORC1Q86VD1 984 aa16.51■□□□□ 0.23
KDM4C-206ENST00000438023 SASS6Q6UVJ0 657 aa16.5■□□□□ 0.23
KDM4C-206ENST00000438023 LNPKQ9C0E8 428 aa16.5■□□□□ 0.23
KDM4C-206ENST00000438023 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
KDM4C-206ENST00000438023 SETQ01105 290 aaPredicted RBP16.5■□□□□ 0.23
KDM4C-206ENST00000438023 CFTRP13569 1480 aa16.49■□□□□ 0.23
KDM4C-206ENST00000438023 VGLL3A8MV65 326 aa16.49■□□□□ 0.23
KDM4C-206ENST00000438023 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
KDM4C-206ENST00000438023 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
KDM4C-206ENST00000438023 PANK3Q9H999 370 aa16.48■□□□□ 0.23
KDM4C-206ENST00000438023 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
KDM4C-206ENST00000438023 NOM1Q5C9Z4 860 aaKnown RBP16.48■□□□□ 0.23
KDM4C-206ENST00000438023 GOLGA6L19H0YKK7 550 aa16.47■□□□□ 0.23
KDM4C-206ENST00000438023 PDZRN3Q9UPQ7 1066 aa16.47■□□□□ 0.23
KDM4C-206ENST00000438023 SPC24Q8NBT2 197 aa16.46■□□□□ 0.23
KDM4C-206ENST00000438023 BECN2A8MW95 431 aa16.46■□□□□ 0.23
KDM4C-206ENST00000438023 DYNC1I1O14576 645 aa16.46■□□□□ 0.23
KDM4C-206ENST00000438023 HOMER1Q86YM7 354 aa16.46■□□□□ 0.22
KDM4C-206ENST00000438023 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.22
KDM4C-206ENST00000438023 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
KDM4C-206ENST00000438023 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
KDM4C-206ENST00000438023 ZKSCAN2Q63HK3 967 aa16.44■□□□□ 0.22
KDM4C-206ENST00000438023 DHX29Q7Z478 1369 aaKnown RBP16.43■□□□□ 0.22
KDM4C-206ENST00000438023 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
KDM4C-206ENST00000438023 TPD52L1Q16890 204 aaPredicted RBP16.43■□□□□ 0.22
KDM4C-206ENST00000438023 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
KDM4C-206ENST00000438023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.43■□□□□ 0.22
KDM4C-206ENST00000438023 TSPY26PQ9H489 355 aa16.43■□□□□ 0.22
KDM4C-206ENST00000438023 CWC15Q9P013 229 aaKnown RBP16.43■□□□□ 0.22
KDM4C-206ENST00000438023 ANKRD30BQ9BXX2 1392 aa16.42■□□□□ 0.22
KDM4C-206ENST00000438023 ARGLU1Q9NWB6 273 aaPredicted RBP16.42■□□□□ 0.22
KDM4C-206ENST00000438023 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
KDM4C-206ENST00000438023 BCAR3O75815 825 aa16.41■□□□□ 0.22
KDM4C-206ENST00000438023 MBD3O95983 291 aa16.41■□□□□ 0.22
KDM4C-206ENST00000438023 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
KDM4C-206ENST00000438023 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
KDM4C-206ENST00000438023 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
KDM4C-206ENST00000438023 SKIDA1Q1XH10 827 aa16.4■□□□□ 0.22
KDM4C-206ENST00000438023 SMAP1Q8IYB5 467 aaPredicted RBP16.4■□□□□ 0.22
KDM4C-206ENST00000438023 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
KDM4C-206ENST00000438023 C8orf34Q49A92 452 aa16.39■□□□□ 0.21
KDM4C-206ENST00000438023 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
KDM4C-206ENST00000438023 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
KDM4C-206ENST00000438023 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
KDM4C-206ENST00000438023 LETM1O95202 739 aaPredicted RBP16.38■□□□□ 0.21
KDM4C-206ENST00000438023 DZIP1LQ8IYY4 767 aaKnown RBP16.38■□□□□ 0.21
KDM4C-206ENST00000438023 SYCE3A1L190 88 aa16.38■□□□□ 0.21
KDM4C-206ENST00000438023 AAMPQ13685 434 aa16.38■□□□□ 0.21
KDM4C-206ENST00000438023 OFD1O75665 1012 aa16.37■□□□□ 0.21
KDM4C-206ENST00000438023 TPM4P67936 248 aa16.37■□□□□ 0.21
KDM4C-206ENST00000438023 CALCOCO1Q9P1Z2 691 aa16.37■□□□□ 0.21
KDM4C-206ENST00000438023 RPRD2Q5VT52 1461 aaKnown RBP16.37■□□□□ 0.21
KDM4C-206ENST00000438023 TRIM5Q9C035 493 aa16.37■□□□□ 0.21
KDM4C-206ENST00000438023 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
KDM4C-206ENST00000438023 GORABQ5T7V8 394 aa16.36■□□□□ 0.21
KDM4C-206ENST00000438023 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
KDM4C-206ENST00000438023 TNPO1Q92973 898 aaKnown RBP16.36■□□□□ 0.21
KDM4C-206ENST00000438023 ELL2O00472 640 aaPredicted RBP16.35■□□□□ 0.21
KDM4C-206ENST00000438023 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 EFCAB5A4FU69 1503 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 NUP155O75694 1391 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 TIGD1Q96MW7 591 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 DEF6Q9H4E7 631 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 GPATCH11Q8N954 259 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 CCDC94Q9BW85 323 aaPredicted RBP16.34■□□□□ 0.21
KDM4C-206ENST00000438023 REC8O95072 547 aa16.34■□□□□ 0.21
KDM4C-206ENST00000438023 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.21
KDM4C-206ENST00000438023 TPM3P06753 285 aa16.33■□□□□ 0.2
KDM4C-206ENST00000438023 RILPL2Q969X0 211 aa16.33■□□□□ 0.2
KDM4C-206ENST00000438023 GTPBP4Q9BZE4 634 aaKnown RBP16.33■□□□□ 0.2
KDM4C-206ENST00000438023 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
KDM4C-206ENST00000438023 HSP90B2PQ58FF3 399 aa16.32■□□□□ 0.2
KDM4C-206ENST00000438023 H0YHG0 523 aa16.32■□□□□ 0.2
KDM4C-206ENST00000438023 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
KDM4C-206ENST00000438023 LEKR1Q6ZMV7 388 aa16.32■□□□□ 0.2
KDM4C-206ENST00000438023 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
KDM4C-206ENST00000438023 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
KDM4C-206ENST00000438023 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
KDM4C-206ENST00000438023 VPS37CA5D8V6 355 aaPredicted RBP16.31■□□□□ 0.2
KDM4C-206ENST00000438023 FBXW7Q969H0 707 aa16.31■□□□□ 0.2
KDM4C-206ENST00000438023 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.2
KDM4C-206ENST00000438023 NBPF1Q3BBV0 1214 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms