RNA–Protein interactions for RNA: ENST00000437844.6

ZEB1-204, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,246 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-204ENST00000437844 HSP90B1P14625 803 aaKnown RBP7.97□□□□□ -1.13
ZEB1-204ENST00000437844 LMTK3Q96Q04 1460 aa7.97□□□□□ -1.13
ZEB1-204ENST00000437844 FRAT1Q92837 279 aaPredicted RBP7.96□□□□□ -1.13
ZEB1-204ENST00000437844 EPRSP07814 1512 aaKnown RBP7.96□□□□□ -1.14
ZEB1-204ENST00000437844 TMEM132AQ24JP5 1023 aa7.96□□□□□ -1.14
ZEB1-204ENST00000437844 NUTM2BA6NNL0 878 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-204ENST00000437844 NUTM2EB1AL46 878 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-204ENST00000437844 NUTM2DQ5VT03 806 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-204ENST00000437844 NUTM2AQ8IVF1 878 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-204ENST00000437844 TERF2IPQ9NYB0 399 aa7.96□□□□□ -1.14
ZEB1-204ENST00000437844 TMF1P82094 1093 aa7.95□□□□□ -1.14
ZEB1-204ENST00000437844 AMER1Q5JTC6 1135 aaPredicted RBP7.95□□□□□ -1.14
ZEB1-204ENST00000437844 BEGAINQ9BUH8 593 aa7.95□□□□□ -1.14
ZEB1-204ENST00000437844 KIF3AQ9Y496 699 aa7.95□□□□□ -1.14
ZEB1-204ENST00000437844 TSPOAP1O95153 1857 aa7.95□□□□□ -1.14
ZEB1-204ENST00000437844 PSME1Q06323 249 aa7.94□□□□□ -1.14
ZEB1-204ENST00000437844 CHMP4CQ96CF2 233 aa7.94□□□□□ -1.14
ZEB1-204ENST00000437844 IPO8O15397 1037 aaKnown RBP7.94□□□□□ -1.14
ZEB1-204ENST00000437844 TEFQ10587 303 aa7.94□□□□□ -1.14
ZEB1-204ENST00000437844 SYNE3Q6ZMZ3 975 aa7.94□□□□□ -1.14
ZEB1-204ENST00000437844 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.94□□□□□ -1.14
ZEB1-204ENST00000437844 KIF3BO15066 747 aa7.94□□□□□ -1.14
ZEB1-204ENST00000437844 TPM4P67936 248 aa7.94□□□□□ -1.14
ZEB1-204ENST00000437844 NUTM2FA1L443 756 aa7.93□□□□□ -1.14
ZEB1-204ENST00000437844 NEXNQ0ZGT2 675 aa7.93□□□□□ -1.14
ZEB1-204ENST00000437844 C9orf84Q5VXU9 1444 aa7.93□□□□□ -1.14
ZEB1-204ENST00000437844 DDX10Q13206 875 aaKnown RBP7.93□□□□□ -1.14
ZEB1-204ENST00000437844 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
ZEB1-204ENST00000437844 HSPA2P54652 639 aa7.93□□□□□ -1.14
ZEB1-204ENST00000437844 CEP162Q5TB80 1403 aa7.93□□□□□ -1.14
ZEB1-204ENST00000437844 RFX1P22670 979 aa7.92□□□□□ -1.14
ZEB1-204ENST00000437844 IKQ13123 557 aaPredicted RBP7.92□□□□□ -1.14
ZEB1-204ENST00000437844 CPLX2Q6PUV4 134 aaKnown RBP7.92□□□□□ -1.14
ZEB1-204ENST00000437844 MAGI3Q5TCQ9 1506 aa7.92□□□□□ -1.14
ZEB1-204ENST00000437844 GLI2P10070 1586 aa7.92□□□□□ -1.14
ZEB1-204ENST00000437844 CCDC47Q96A33 483 aaKnown RBP7.92□□□□□ -1.14
ZEB1-204ENST00000437844 RUSC2Q8N2Y8 1516 aa7.91□□□□□ -1.14
ZEB1-204ENST00000437844 UGGT2Q9NYU1 1516 aa7.91□□□□□ -1.14
ZEB1-204ENST00000437844 RAPGEF4Q8WZA2 1011 aa7.91□□□□□ -1.14
ZEB1-204ENST00000437844 KDM4FA0A1W2PPD8 638 aa7.91□□□□□ -1.14
ZEB1-204ENST00000437844 HMMRO75330 724 aa7.91□□□□□ -1.14
ZEB1-204ENST00000437844 LMOD3Q0VAK6 560 aa7.91□□□□□ -1.14
ZEB1-204ENST00000437844 USP35Q9P2H5 1018 aa7.91□□□□□ -1.14
ZEB1-204ENST00000437844 MAGI2Q86UL8 1455 aa7.91□□□□□ -1.14
ZEB1-204ENST00000437844 NOP2P46087 812 aaKnown RBP7.91□□□□□ -1.14
ZEB1-204ENST00000437844 ZFYVE16Q7Z3T8 1539 aa7.9□□□□□ -1.14
ZEB1-204ENST00000437844 ODF2Q5BJF6 829 aa7.9□□□□□ -1.14
ZEB1-204ENST00000437844 ATP10AO60312 1499 aa7.9□□□□□ -1.14
ZEB1-204ENST00000437844 FHOD3Q2V2M9 1422 aa7.9□□□□□ -1.15
ZEB1-204ENST00000437844 TPM3P06753 285 aa7.9□□□□□ -1.15
ZEB1-204ENST00000437844 HSP90AB1P08238 724 aaKnown RBP7.9□□□□□ -1.15
ZEB1-204ENST00000437844 PROSER2Q86WR7 435 aaPredicted RBP7.9□□□□□ -1.15
ZEB1-204ENST00000437844 TPM2P07951 284 aa7.9□□□□□ -1.15
ZEB1-204ENST00000437844 CREBRFQ8IUR6 639 aa7.9□□□□□ -1.15
ZEB1-204ENST00000437844 DRC7Q8IY82 874 aa7.89□□□□□ -1.15
ZEB1-204ENST00000437844 APBB1O00213 710 aa7.89□□□□□ -1.15
ZEB1-204ENST00000437844 TTLL12Q14166 644 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-204ENST00000437844 CCDC97Q96F63 343 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-204ENST00000437844 DIP2BQ9P265 1576 aa7.88□□□□□ -1.15
ZEB1-204ENST00000437844 TSR1Q2NL82 804 aaKnown RBP7.88□□□□□ -1.15
ZEB1-204ENST00000437844 KIAA0556O60303 1618 aa7.88□□□□□ -1.15
ZEB1-204ENST00000437844 HECW1Q76N89 1606 aa7.88□□□□□ -1.15
ZEB1-204ENST00000437844 KDM5BQ9UGL1 1544 aa7.88□□□□□ -1.15
ZEB1-204ENST00000437844 CT47A1Q5JQC4 288 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-204ENST00000437844 U2AF1L5P0DN76 240 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-204ENST00000437844 U2AF1Q01081 240 aaKnown RBP eCLIP7.87□□□□□ -1.15
ZEB1-204ENST00000437844 TMOD2Q9NZR1 351 aa7.87□□□□□ -1.15
ZEB1-204ENST00000437844 ZNF518AQ6AHZ1 1483 aa7.87□□□□□ -1.15
ZEB1-204ENST00000437844 PES1O00541 588 aaKnown RBP7.87□□□□□ -1.15
ZEB1-204ENST00000437844 SLC4A3P48751 1232 aa7.87□□□□□ -1.15
ZEB1-204ENST00000437844 ERICH6BQ5W0A0 696 aa7.87□□□□□ -1.15
ZEB1-204ENST00000437844 FAM135AQ9P2D6 1515 aa7.86□□□□□ -1.15
ZEB1-204ENST00000437844 NLRP2Q9NX02 1062 aa7.86□□□□□ -1.15
ZEB1-204ENST00000437844 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
ZEB1-204ENST00000437844 MPHOSPH10O00566 681 aaKnown RBP7.86□□□□□ -1.15
ZEB1-204ENST00000437844 RDXP35241 583 aaKnown RBP7.86□□□□□ -1.15
ZEB1-204ENST00000437844 IL27Q8NEV9 243 aa7.86□□□□□ -1.15
ZEB1-204ENST00000437844 MYCNP04198 464 aaPredicted RBP7.85□□□□□ -1.15
ZEB1-204ENST00000437844 HNRNPMP52272 730 aaKnown RBP eCLIP7.85□□□□□ -1.154e-6■■■■□ 20.1
ZEB1-204ENST00000437844 SF3A1Q15459 793 aaKnown RBP7.85□□□□□ -1.15
ZEB1-204ENST00000437844 TPD52L1Q16890 204 aaPredicted RBP7.85□□□□□ -1.15
ZEB1-204ENST00000437844 CFAP43Q8NDM7 1665 aa7.85□□□□□ -1.15
ZEB1-204ENST00000437844 DCAF11Q8TEB1 546 aa7.85□□□□□ -1.15
ZEB1-204ENST00000437844 YEATS2Q9ULM3 1422 aa7.85□□□□□ -1.15
ZEB1-204ENST00000437844 KIF14Q15058 1648 aa7.85□□□□□ -1.15
ZEB1-204ENST00000437844 DDX58O95786 925 aaKnown RBP7.85□□□□□ -1.15
ZEB1-204ENST00000437844 TRIM21P19474 475 aaKnown RBP7.85□□□□□ -1.15
ZEB1-204ENST00000437844 SHROOM2Q13796 1616 aa7.85□□□□□ -1.15
ZEB1-204ENST00000437844 GRM1Q13255 1194 aa7.84□□□□□ -1.15
ZEB1-204ENST00000437844 NGEFQ8N5V2 710 aa7.84□□□□□ -1.15
ZEB1-204ENST00000437844 APPP05067 770 aa7.84□□□□□ -1.15
ZEB1-204ENST00000437844 TXNDC2Q86VQ3 553 aa7.84□□□□□ -1.15
ZEB1-204ENST00000437844 SLC4A10Q6U841 1118 aa7.84□□□□□ -1.15
ZEB1-204ENST00000437844 NGLY1Q96IV0 654 aa7.84□□□□□ -1.15
ZEB1-204ENST00000437844 CRBNQ96SW2 442 aa7.84□□□□□ -1.15
ZEB1-204ENST00000437844 TROQ12816 1431 aaPredicted RBP7.84□□□□□ -1.15
ZEB1-204ENST00000437844 ERICH2A1L162 156 aa7.83□□□□□ -1.16
ZEB1-204ENST00000437844 PTPRMP28827 1452 aa7.83□□□□□ -1.16
ZEB1-204ENST00000437844 TRDNQ13061 729 aa7.83□□□□□ -1.16
ZEB1-204ENST00000437844 DNAI2Q9GZS0 605 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms