RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 SLIT1O75093 1534 aa21.32■■□□□ 1
SKA2-202ENST00000437036 NEURL4Q96JN8 1562 aa21.31■■□□□ 1
SKA2-202ENST00000437036 RIMS2Q9UQ26 1411 aa21.31■■□□□ 1
SKA2-202ENST00000437036 ARHGAP23Q9P227 1491 aa21.31■■□□□ 1
SKA2-202ENST00000437036 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
SKA2-202ENST00000437036 VGFO15240 615 aaPredicted RBP21.28■■□□□ 1
SKA2-202ENST00000437036 MYO5BQ9ULV0 1848 aa21.27■■□□□ 1
SKA2-202ENST00000437036 SCAF11Q99590 1463 aaKnown RBP21.27■■□□□ 1
SKA2-202ENST00000437036 LTKP29376 864 aa21.27■■□□□ 1
SKA2-202ENST00000437036 DMRT2Q9Y5R5 561 aa21.27■■□□□ 1
SKA2-202ENST00000437036 ZFYVE9O95405 1425 aa21.27■■□□□ 1
SKA2-202ENST00000437036 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
SKA2-202ENST00000437036 STAC3Q96MF2 364 aa21.26■□□□□ 0.99
SKA2-202ENST00000437036 BCANQ96GW7 911 aa21.25■□□□□ 0.99
SKA2-202ENST00000437036 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
SKA2-202ENST00000437036 DCAF11Q8TEB1 546 aa21.23■□□□□ 0.99
SKA2-202ENST00000437036 NEXMIFQ5QGS0 1516 aa21.23■□□□□ 0.99
SKA2-202ENST00000437036 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
SKA2-202ENST00000437036 NPHP4O75161 1426 aaPredicted RBP21.21■□□□□ 0.99
SKA2-202ENST00000437036 L3MBTL2Q969R5 705 aa21.2■□□□□ 0.98
SKA2-202ENST00000437036 KDM2AQ9Y2K7 1162 aa21.2■□□□□ 0.98
SKA2-202ENST00000437036 MED14O60244 1454 aa21.2■□□□□ 0.98
SKA2-202ENST00000437036 POLR1AO95602 1720 aaPredicted RBP21.19■□□□□ 0.98
SKA2-202ENST00000437036 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
SKA2-202ENST00000437036 STRCQ7RTU9 1775 aa21.17■□□□□ 0.98
SKA2-202ENST00000437036 PPLO60437 1756 aa21.16■□□□□ 0.98
SKA2-202ENST00000437036 MYOM2P54296 1465 aa21.16■□□□□ 0.98
SKA2-202ENST00000437036 ADGRF5Q8IZF2 1346 aa21.16■□□□□ 0.98
SKA2-202ENST00000437036 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
SKA2-202ENST00000437036 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
SKA2-202ENST00000437036 IFT172Q9UG01 1749 aa21.12■□□□□ 0.97
SKA2-202ENST00000437036 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
SKA2-202ENST00000437036 TBX22Q9Y458 520 aa21.12■□□□□ 0.97
SKA2-202ENST00000437036 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
SKA2-202ENST00000437036 NRXN1Q9ULB1 1477 aa21.09■□□□□ 0.97
SKA2-202ENST00000437036 PIK3C2GO75747 1445 aa21.09■□□□□ 0.97
SKA2-202ENST00000437036 DIP2AQ14689 1571 aa21.07■□□□□ 0.96
SKA2-202ENST00000437036 ADAMTS13Q76LX8 1427 aa21.07■□□□□ 0.96
SKA2-202ENST00000437036 C14orf93Q9H972 538 aaKnown RBP21.07■□□□□ 0.96
SKA2-202ENST00000437036 PRAG1Q86YV5 1406 aa21.05■□□□□ 0.96
SKA2-202ENST00000437036 CFAP70Q5T0N1 1121 aa21.04■□□□□ 0.96
SKA2-202ENST00000437036 PIK3R4Q99570 1358 aa21.04■□□□□ 0.96
SKA2-202ENST00000437036 ALKQ9UM73 1620 aa21.04■□□□□ 0.96
SKA2-202ENST00000437036 NRXN3Q9Y4C0 1643 aa21.03■□□□□ 0.96
SKA2-202ENST00000437036 KCNA6P17658 529 aa21.01■□□□□ 0.95
SKA2-202ENST00000437036 METP08581 1390 aa21■□□□□ 0.95
SKA2-202ENST00000437036 LAMC1P11047 1609 aa21■□□□□ 0.95
SKA2-202ENST00000437036 NBPF8Q3BBV2 869 aa20.98■□□□□ 0.95
SKA2-202ENST00000437036 TMEM132EQ6IEE7 984 aa20.98■□□□□ 0.95
SKA2-202ENST00000437036 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
SKA2-202ENST00000437036 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
SKA2-202ENST00000437036 KIAA1210Q9ULL0 1709 aa20.95■□□□□ 0.94
SKA2-202ENST00000437036 STK26Q9P289 416 aa20.94■□□□□ 0.94
SKA2-202ENST00000437036 ROCK2O75116 1388 aaKnown RBP20.94■□□□□ 0.94
SKA2-202ENST00000437036 LRPPRCP42704 1394 aaKnown RBP20.94■□□□□ 0.94
SKA2-202ENST00000437036 NBPF1Q3BBV0 1214 aa20.93■□□□□ 0.94
SKA2-202ENST00000437036 PTPRUQ92729 1446 aa20.93■□□□□ 0.94
SKA2-202ENST00000437036 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
SKA2-202ENST00000437036 YTHDC2Q9H6S0 1430 aaKnown RBP20.92■□□□□ 0.94
SKA2-202ENST00000437036 ZEB1P37275 1124 aaPredicted RBP20.91■□□□□ 0.94
SKA2-202ENST00000437036 PROSER2Q86WR7 435 aaPredicted RBP20.91■□□□□ 0.94
SKA2-202ENST00000437036 ABCC11Q96J66 1382 aa20.91■□□□□ 0.94
SKA2-202ENST00000437036 CHD2O14647 1828 aaKnown RBP20.9■□□□□ 0.94
SKA2-202ENST00000437036 NWD1Q149M9 1564 aa20.9■□□□□ 0.94
SKA2-202ENST00000437036 CPS1P31327 1500 aa20.9■□□□□ 0.94
SKA2-202ENST00000437036 RALGAPBQ86X10 1494 aa20.9■□□□□ 0.94
SKA2-202ENST00000437036 ADGRB1O14514 1584 aa20.89■□□□□ 0.94
SKA2-202ENST00000437036 ASXL1Q8IXJ9 1541 aa20.89■□□□□ 0.94
SKA2-202ENST00000437036 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.94
SKA2-202ENST00000437036 CARD11Q9BXL7 1154 aa20.89■□□□□ 0.93
SKA2-202ENST00000437036 TRAK1Q9UPV9 953 aa20.89■□□□□ 0.93
SKA2-202ENST00000437036 TRPM1Q7Z4N2 1603 aa20.89■□□□□ 0.93
SKA2-202ENST00000437036 SIRT1Q96EB6 747 aa20.88■□□□□ 0.93
SKA2-202ENST00000437036 TECPR2O15040 1411 aa20.87■□□□□ 0.93
SKA2-202ENST00000437036 GPRASP1Q5JY77 1395 aa20.86■□□□□ 0.93
SKA2-202ENST00000437036 PTCH1Q13635 1447 aa20.86■□□□□ 0.93
SKA2-202ENST00000437036 XRN1Q8IZH2 1706 aaKnown RBP20.85■□□□□ 0.93
SKA2-202ENST00000437036 POGKQ9P215 609 aa20.85■□□□□ 0.93
SKA2-202ENST00000437036 C14orf37Q86TY3 774 aa20.84■□□□□ 0.93
SKA2-202ENST00000437036 LTBP4Q8N2S1 1624 aa20.84■□□□□ 0.93
SKA2-202ENST00000437036 ROBO2Q9HCK4 1378 aa20.84■□□□□ 0.93
SKA2-202ENST00000437036 FAM135BQ49AJ0 1406 aa20.83■□□□□ 0.93
SKA2-202ENST00000437036 STRCP1A6NGW2 1772 aa20.82■□□□□ 0.92
SKA2-202ENST00000437036 PRAM1Q96QH2 718 aa20.82■□□□□ 0.92
SKA2-202ENST00000437036 LRRC7Q96NW7 1537 aa20.82■□□□□ 0.92
SKA2-202ENST00000437036 DLC1Q96QB1 1528 aa20.82■□□□□ 0.92
SKA2-202ENST00000437036 TMEM94Q12767 1356 aa20.82■□□□□ 0.92
SKA2-202ENST00000437036 EIF3AQ14152 1382 aaKnown RBP20.82■□□□□ 0.92
SKA2-202ENST00000437036 NCOA3Q9Y6Q9 1424 aa20.81■□□□□ 0.92
SKA2-202ENST00000437036 WAPLQ7Z5K2 1190 aa20.81■□□□□ 0.92
SKA2-202ENST00000437036 KNDC1Q76NI1 1749 aa20.81■□□□□ 0.92
SKA2-202ENST00000437036 RBM33Q96EV2 1170 aaKnown RBP20.79■□□□□ 0.92
SKA2-202ENST00000437036 CERKQ8TCT0 537 aa20.78■□□□□ 0.92
SKA2-202ENST00000437036 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
SKA2-202ENST00000437036 CENPJQ9HC77 1338 aaPredicted RBP20.77■□□□□ 0.91
SKA2-202ENST00000437036 C19orf44Q9H6X5 657 aa20.76■□□□□ 0.91
SKA2-202ENST00000437036 MSH6P52701 1360 aa20.75■□□□□ 0.91
SKA2-202ENST00000437036 PLEKHH1Q9ULM0 1364 aa20.75■□□□□ 0.91
SKA2-202ENST00000437036 IQSEC2Q5JU85 1478 aa20.74■□□□□ 0.91
SKA2-202ENST00000437036 USP47Q96K76 1375 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms