RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 CXorf38Q8TB03 319 aa6.83□□□□□ -1.32
CAST-209ENST00000437034 ERCC3P19447 782 aa6.83□□□□□ -1.32
CAST-209ENST00000437034 MORC4Q8TE76 937 aa6.83□□□□□ -1.32
CAST-209ENST00000437034 TSPAN18Q96SJ8 248 aa6.83□□□□□ -1.32
CAST-209ENST00000437034 CREB3O43889 395 aa6.82□□□□□ -1.32
CAST-209ENST00000437034 CALRP27797 417 aaKnown RBP6.82□□□□□ -1.32
CAST-209ENST00000437034 ZKSCAN2Q63HK3 967 aa6.82□□□□□ -1.32
CAST-209ENST00000437034 ZHX1Q9UKY1 873 aaPredicted RBP6.82□□□□□ -1.32
CAST-209ENST00000437034 SDR16C5Q8N3Y7 309 aa6.82□□□□□ -1.32
CAST-209ENST00000437034 CCDC97Q96F63 343 aaPredicted RBP6.82□□□□□ -1.32
CAST-209ENST00000437034 FRMD4BQ9Y2L6 1034 aa6.82□□□□□ -1.32
CAST-209ENST00000437034 GIMAP6Q6P9H5 292 aa6.81□□□□□ -1.32
CAST-209ENST00000437034 BANK1Q8NDB2 785 aa6.81□□□□□ -1.32
CAST-209ENST00000437034 FANCIQ9NVI1 1328 aa6.81□□□□□ -1.32
CAST-209ENST00000437034 TNNT2P45379 298 aaPredicted RBP6.81□□□□□ -1.32
CAST-209ENST00000437034 MAP2K1Q02750 393 aaPredicted RBP6.81□□□□□ -1.32
CAST-209ENST00000437034 TAF3Q5VWG9 929 aa6.81□□□□□ -1.32
CAST-209ENST00000437034 NBPF6Q5VWK0 638 aa6.81□□□□□ -1.32
CAST-209ENST00000437034 NBPF5PQ86XG9 351 aaPredicted RBP6.81□□□□□ -1.32
CAST-209ENST00000437034 HS6ST3Q8IZP7 471 aa6.81□□□□□ -1.32
CAST-209ENST00000437034 NBPF4Q96M43 638 aa6.81□□□□□ -1.32
CAST-209ENST00000437034 ARHGEF1Q92888 912 aaKnown RBP6.8□□□□□ -1.32
CAST-209ENST00000437034 CT47B1P0C2W7 299 aaPredicted RBP6.8□□□□□ -1.32
CAST-209ENST00000437034 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
CAST-209ENST00000437034 MRVI1Q9Y6F6 885 aa6.8□□□□□ -1.32
CAST-209ENST00000437034 CENPJQ9HC77 1338 aaPredicted RBP6.8□□□□□ -1.32
CAST-209ENST00000437034 TRAK2O60296 914 aa6.8□□□□□ -1.32
CAST-209ENST00000437034 BARGINQ6ZT62 677 aa6.8□□□□□ -1.32
CAST-209ENST00000437034 PROCA1Q8NCQ7 364 aaPredicted RBP6.8□□□□□ -1.32
CAST-209ENST00000437034 GABBR1Q9UBS5 961 aa6.8□□□□□ -1.32
CAST-209ENST00000437034 TOP2BQ02880 1626 aa6.79□□□□□ -1.32
CAST-209ENST00000437034 LMOD3Q0VAK6 560 aa6.79□□□□□ -1.32
CAST-209ENST00000437034 DDX46Q7L014 1031 aaKnown RBP6.79□□□□□ -1.32
CAST-209ENST00000437034 FAM43AQ8N2R8 423 aa6.79□□□□□ -1.32
CAST-209ENST00000437034 CFTRP13569 1480 aa6.79□□□□□ -1.32
CAST-209ENST00000437034 ZC3H4Q9UPT8 1303 aaKnown RBP6.79□□□□□ -1.32
CAST-209ENST00000437034 METTL14Q9HCE5 456 aaKnown RBP6.79□□□□□ -1.32
CAST-209ENST00000437034 STK26Q9P289 416 aa6.79□□□□□ -1.32
CAST-209ENST00000437034 KCNA1Q09470 495 aa6.78□□□□□ -1.32
CAST-209ENST00000437034 STK10O94804 968 aaKnown RBP6.78□□□□□ -1.32
CAST-209ENST00000437034 MSL3Q8N5Y2 521 aaKnown RBP6.78□□□□□ -1.32
CAST-209ENST00000437034 WDHD1O75717 1129 aaPredicted RBP6.78□□□□□ -1.32
CAST-209ENST00000437034 PPP4R3BQ5MIZ7 849 aa6.78□□□□□ -1.32
CAST-209ENST00000437034 ZCRB1Q8TBF4 217 aaKnown RBP6.78□□□□□ -1.32
CAST-209ENST00000437034 CCDC184Q52MB2 194 aa6.77□□□□□ -1.33
CAST-209ENST00000437034 CIZ1Q9ULV3 898 aaPredicted RBP6.77□□□□□ -1.33
CAST-209ENST00000437034 CTDP1Q9Y5B0 961 aaPredicted RBP6.77□□□□□ -1.33
CAST-209ENST00000437034 CHMP4CQ96CF2 233 aa6.77□□□□□ -1.33
CAST-209ENST00000437034 PDCL3Q9H2J4 239 aa6.77□□□□□ -1.33
CAST-209ENST00000437034 PRR29P0C7W0 189 aa6.77□□□□□ -1.33
CAST-209ENST00000437034 PMM1Q92871 262 aa6.77□□□□□ -1.33
CAST-209ENST00000437034 CCDC88BA6NC98 1476 aa6.76□□□□□ -1.33
CAST-209ENST00000437034 CSPP1Q1MSJ5 1256 aa6.76□□□□□ -1.33
CAST-209ENST00000437034 DRC1Q96MC2 740 aa6.76□□□□□ -1.33
CAST-209ENST00000437034 CARNS1A5YM72 827 aa6.76□□□□□ -1.33
CAST-209ENST00000437034 ZRSR2Q15696 482 aaKnown RBP6.76□□□□□ -1.33
CAST-209ENST00000437034 EP400NLQ6ZTU2 488 aa6.76□□□□□ -1.33
CAST-209ENST00000437034 RNF217Q8TC41 542 aa6.75□□□□□ -1.33
CAST-209ENST00000437034 RPGRIP1LQ68CZ1 1315 aa6.75□□□□□ -1.33
CAST-209ENST00000437034 HMGB1P1B2RPK0 211 aaPredicted RBP6.75□□□□□ -1.33
CAST-209ENST00000437034 NUB1Q9Y5A7 615 aa6.75□□□□□ -1.33
CAST-209ENST00000437034 IPO8O15397 1037 aaKnown RBP6.75□□□□□ -1.33
CAST-209ENST00000437034 DIEXFQ68CQ4 756 aaKnown RBP6.75□□□□□ -1.33
CAST-209ENST00000437034 NBPF10Q6P3W6 841 aaKnown RBP6.75□□□□□ -1.33
CAST-209ENST00000437034 FAM117AQ9C073 453 aa6.75□□□□□ -1.33
CAST-209ENST00000437034 UBA5Q9GZZ9 404 aa6.75□□□□□ -1.33
CAST-209ENST00000437034 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.75□□□□□ -1.33
CAST-209ENST00000437034 ANP32AP39687 249 aaKnown RBP6.74□□□□□ -1.33
CAST-209ENST00000437034 THOC2Q8NI27 1593 aaKnown RBP6.74□□□□□ -1.33
CAST-209ENST00000437034 AMOTL2Q9Y2J4 779 aa6.74□□□□□ -1.33
CAST-209ENST00000437034 BAZ1BQ9UIG0 1483 aaKnown RBP6.74□□□□□ -1.33
CAST-209ENST00000437034 PARNO95453 639 aaKnown RBP6.74□□□□□ -1.33
CAST-209ENST00000437034 MTA1Q13330 715 aa6.74□□□□□ -1.33
CAST-209ENST00000437034 IGSF5Q9NSI5 407 aa6.74□□□□□ -1.33
CAST-209ENST00000437034 MAGEC2Q9UBF1 373 aaPredicted RBP6.74□□□□□ -1.33
CAST-209ENST00000437034 CSB-PGBD3P0DP91 1061 aa6.74□□□□□ -1.33
CAST-209ENST00000437034 PDE6BP35913 854 aa6.74□□□□□ -1.33
CAST-209ENST00000437034 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
CAST-209ENST00000437034 SETDB1Q15047 1291 aa6.73□□□□□ -1.33
CAST-209ENST00000437034 KCNV2Q8TDN2 545 aa6.73□□□□□ -1.33
CAST-209ENST00000437034 CDCA7Q9BWT1 371 aaPredicted RBP6.73□□□□□ -1.33
CAST-209ENST00000437034 SMAP1Q8IYB5 467 aaPredicted RBP6.73□□□□□ -1.33
CAST-209ENST00000437034 GPATCH3Q96I76 525 aa6.73□□□□□ -1.33
CAST-209ENST00000437034 WWC3Q9ULE0 1092 aa6.73□□□□□ -1.33
CAST-209ENST00000437034 ZRANB2O95218 330 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAST-209ENST00000437034 SATB1Q01826 763 aa6.72□□□□□ -1.33
CAST-209ENST00000437034 CLEC4GQ6UXB4 293 aa6.72□□□□□ -1.33
CAST-209ENST00000437034 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
CAST-209ENST00000437034 MRRFQ96E11 262 aaKnown RBP6.72□□□□□ -1.33
CAST-209ENST00000437034 DDRGK1Q96HY6 314 aa6.72□□□□□ -1.33
CAST-209ENST00000437034 LIG1P18858 919 aa6.72□□□□□ -1.33
CAST-209ENST00000437034 ANKRD23Q86SG2 305 aa6.72□□□□□ -1.33
CAST-209ENST00000437034 GEMIN8Q9NWZ8 242 aaKnown RBP6.72□□□□□ -1.33
CAST-209ENST00000437034 TPX2Q9ULW0 747 aaKnown RBP6.72□□□□□ -1.33
CAST-209ENST00000437034 MPHOSPH10O00566 681 aaKnown RBP6.71□□□□□ -1.33
CAST-209ENST00000437034 RPAINQ86UA6 219 aa6.71□□□□□ -1.33
CAST-209ENST00000437034 ARHGEF10LQ9HCE6 1279 aa6.71□□□□□ -1.33
CAST-209ENST00000437034 RAI14Q9P0K7 980 aa6.71□□□□□ -1.33
CAST-209ENST00000437034 ISY1Q9ULR0 285 aaKnown RBP6.71□□□□□ -1.33
CAST-209ENST00000437034 HOXD11P31277 338 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms