RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 KNSTRNQ9Y448 316 aa13.83□□□□□ -0.2
CLSTN1-203ENST00000435891 ARAP3Q8WWN8 1544 aa13.82□□□□□ -0.2
CLSTN1-203ENST00000435891 SCAF11Q99590 1463 aaKnown RBP13.82□□□□□ -0.2
CLSTN1-203ENST00000435891 CFAP70Q5T0N1 1121 aa13.82□□□□□ -0.2
CLSTN1-203ENST00000435891 INO80Q9ULG1 1556 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-203ENST00000435891 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
CLSTN1-203ENST00000435891 ABCA9Q8IUA7 1624 aa13.81□□□□□ -0.2
CLSTN1-203ENST00000435891 TET3O43151 1660 aa13.81□□□□□ -0.2
CLSTN1-203ENST00000435891 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
CLSTN1-203ENST00000435891 ADGRL1O94910 1474 aa13.8□□□□□ -0.2
CLSTN1-203ENST00000435891 VWDEQ8N2E2 1590 aa13.8□□□□□ -0.2
CLSTN1-203ENST00000435891 PLEKHH1Q9ULM0 1364 aa13.79□□□□□ -0.2
CLSTN1-203ENST00000435891 MROH1Q8NDA8 1641 aa13.79□□□□□ -0.2
CLSTN1-203ENST00000435891 SKAP1Q86WV1 359 aa13.79□□□□□ -0.2
CLSTN1-203ENST00000435891 KANK1Q14678 1352 aa13.79□□□□□ -0.2
CLSTN1-203ENST00000435891 IL27Q8NEV9 243 aa13.78□□□□□ -0.2
CLSTN1-203ENST00000435891 C20orf194Q5TEA3 1177 aa13.78□□□□□ -0.2
CLSTN1-203ENST00000435891 ZMYM4Q5VZL5 1548 aa13.78□□□□□ -0.2
CLSTN1-203ENST00000435891 INSRP06213 1382 aa13.77□□□□□ -0.2
CLSTN1-203ENST00000435891 MYOM1P52179 1685 aa13.77□□□□□ -0.2
CLSTN1-203ENST00000435891 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
CLSTN1-203ENST00000435891 SYNMO15061 1565 aa13.76□□□□□ -0.21
CLSTN1-203ENST00000435891 ASXL2Q76L83 1435 aa13.76□□□□□ -0.21
CLSTN1-203ENST00000435891 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLSTN1-203ENST00000435891 NOP58Q9Y2X3 529 aaKnown RBP13.75□□□□□ -0.21
CLSTN1-203ENST00000435891 ASXL1Q8IXJ9 1541 aa13.75□□□□□ -0.21
CLSTN1-203ENST00000435891 CCDC146Q8IYE0 955 aa13.75□□□□□ -0.21
CLSTN1-203ENST00000435891 CDCA8Q53HL2 280 aa13.75□□□□□ -0.21
CLSTN1-203ENST00000435891 STAC3Q96MF2 364 aa13.74□□□□□ -0.21
CLSTN1-203ENST00000435891 CARD14Q9BXL6 1004 aa13.74□□□□□ -0.21
CLSTN1-203ENST00000435891 ABCA6Q8N139 1617 aa13.74□□□□□ -0.21
CLSTN1-203ENST00000435891 DUSP27Q5VZP5 1158 aa13.74□□□□□ -0.21
CLSTN1-203ENST00000435891 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
CLSTN1-203ENST00000435891 MAP3K4Q9Y6R4 1608 aa13.73□□□□□ -0.21
CLSTN1-203ENST00000435891 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
CLSTN1-203ENST00000435891 ZNF521Q96K83 1311 aa13.73□□□□□ -0.21
CLSTN1-203ENST00000435891 EIF3AQ14152 1382 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-203ENST00000435891 MROH2AA6NES4 1674 aa13.72□□□□□ -0.21
CLSTN1-203ENST00000435891 PPRC1Q5VV67 1664 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-203ENST00000435891 CHGAP10645 457 aaKnown RBP13.72□□□□□ -0.21
CLSTN1-203ENST00000435891 EFCAB6Q5THR3 1501 aa13.71□□□□□ -0.21
CLSTN1-203ENST00000435891 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
CLSTN1-203ENST00000435891 UBE2Q2Q8WVN8 375 aa13.71□□□□□ -0.21
CLSTN1-203ENST00000435891 ANP32AP39687 249 aaKnown RBP13.71□□□□□ -0.22
CLSTN1-203ENST00000435891 IPO9Q96P70 1041 aaKnown RBP13.71□□□□□ -0.22
CLSTN1-203ENST00000435891 CFAP65Q6ZU64 1925 aaKnown RBP13.71□□□□□ -0.22
CLSTN1-203ENST00000435891 PIK3C2GO75747 1445 aa13.7□□□□□ -0.22
CLSTN1-203ENST00000435891 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
CLSTN1-203ENST00000435891 MYOM2P54296 1465 aa13.7□□□□□ -0.22
CLSTN1-203ENST00000435891 KDM5AP29375 1690 aaKnown RBP13.7□□□□□ -0.22
CLSTN1-203ENST00000435891 NPM2Q86SE8 214 aaKnown RBP13.7□□□□□ -0.22
CLSTN1-203ENST00000435891 NOS1P29475 1434 aa13.7□□□□□ -0.22
CLSTN1-203ENST00000435891 PDE4AP27815 886 aa13.69□□□□□ -0.22
CLSTN1-203ENST00000435891 APAF1O14727 1248 aa13.69□□□□□ -0.22
CLSTN1-203ENST00000435891 GGT6Q6P531 493 aa13.69□□□□□ -0.22
CLSTN1-203ENST00000435891 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
CLSTN1-203ENST00000435891 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
CLSTN1-203ENST00000435891 KIF1BO60333 1816 aa13.69□□□□□ -0.22
CLSTN1-203ENST00000435891 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
CLSTN1-203ENST00000435891 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
CLSTN1-203ENST00000435891 TRAK1Q9UPV9 953 aa13.68□□□□□ -0.22
CLSTN1-203ENST00000435891 NEURL4Q96JN8 1562 aa13.68□□□□□ -0.22
CLSTN1-203ENST00000435891 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
CLSTN1-203ENST00000435891 TMEM132EQ6IEE7 984 aa13.67□□□□□ -0.22
CLSTN1-203ENST00000435891 SLFN5Q08AF3 891 aa13.67□□□□□ -0.22
CLSTN1-203ENST00000435891 BACH2Q9BYV9 841 aa13.67□□□□□ -0.22
CLSTN1-203ENST00000435891 NPATQ14207 1427 aa13.67□□□□□ -0.22
CLSTN1-203ENST00000435891 ZNF518AQ6AHZ1 1483 aa13.66□□□□□ -0.22
CLSTN1-203ENST00000435891 NRXN1Q9ULB1 1477 aa13.66□□□□□ -0.22
CLSTN1-203ENST00000435891 NUTM2DQ5VT03 806 aaPredicted RBP13.65□□□□□ -0.22
CLSTN1-203ENST00000435891 FRMPD1Q5SYB0 1578 aa13.65□□□□□ -0.22
CLSTN1-203ENST00000435891 TNNT2P45379 298 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-203ENST00000435891 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
CLSTN1-203ENST00000435891 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-203ENST00000435891 ZBTB47Q9UFB7 747 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-203ENST00000435891 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
CLSTN1-203ENST00000435891 TRMT2AQ8IZ69 625 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-203ENST00000435891 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
CLSTN1-203ENST00000435891 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
CLSTN1-203ENST00000435891 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
CLSTN1-203ENST00000435891 KDM2BQ8NHM5 1336 aa13.63□□□□□ -0.23
CLSTN1-203ENST00000435891 BCAR3O75815 825 aa13.62□□□□□ -0.23
CLSTN1-203ENST00000435891 POGZQ7Z3K3 1410 aa13.62□□□□□ -0.23
CLSTN1-203ENST00000435891 RAPGEF3O95398 923 aa13.62□□□□□ -0.23
CLSTN1-203ENST00000435891 MS4A1P11836 297 aa13.62□□□□□ -0.23
CLSTN1-203ENST00000435891 C14orf93Q9H972 538 aaKnown RBP13.62□□□□□ -0.23
CLSTN1-203ENST00000435891 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLSTN1-203ENST00000435891 SBNO2Q9Y2G9 1366 aa13.61□□□□□ -0.23
CLSTN1-203ENST00000435891 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
CLSTN1-203ENST00000435891 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
CLSTN1-203ENST00000435891 ADGRB1O14514 1584 aa13.6□□□□□ -0.23
CLSTN1-203ENST00000435891 PPLO60437 1756 aa13.58□□□□□ -0.23
CLSTN1-203ENST00000435891 MLH3Q9UHC1 1453 aa13.58□□□□□ -0.24
CLSTN1-203ENST00000435891 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
CLSTN1-203ENST00000435891 NEUROD2Q15784 382 aa13.58□□□□□ -0.24
CLSTN1-203ENST00000435891 NKTRP30414 1462 aaKnown RBP13.58□□□□□ -0.24
CLSTN1-203ENST00000435891 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
CLSTN1-203ENST00000435891 SETBP1Q9Y6X0 1596 aa13.58□□□□□ -0.24
CLSTN1-203ENST00000435891 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
CLSTN1-203ENST00000435891 PKNOX2Q96KN3 472 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms