RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-204ENST00000435606 DHX16O60231 1041 aaKnown RBP13.09□□□□□ -0.31
LDLRAD4-204ENST00000435606 APPP05067 770 aa13.09□□□□□ -0.31
LDLRAD4-204ENST00000435606 ATP6V1DQ9Y5K8 247 aa13.09□□□□□ -0.31
LDLRAD4-204ENST00000435606 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.31
LDLRAD4-204ENST00000435606 TPM1P09493 284 aa13.08□□□□□ -0.32
LDLRAD4-204ENST00000435606 PANK3Q9H999 370 aa13.08□□□□□ -0.32
LDLRAD4-204ENST00000435606 DHX57Q6P158 1386 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-204ENST00000435606 TRDNQ13061 729 aa13.08□□□□□ -0.32
LDLRAD4-204ENST00000435606 ERICH2A1L162 156 aa13.08□□□□□ -0.32
LDLRAD4-204ENST00000435606 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
LDLRAD4-204ENST00000435606 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
LDLRAD4-204ENST00000435606 DIAPH1O60610 1272 aaKnown RBP13.07□□□□□ -0.32
LDLRAD4-204ENST00000435606 WWC1Q8IX03 1113 aa13.07□□□□□ -0.32
LDLRAD4-204ENST00000435606 IFIT2P09913 472 aaKnown RBP13.07□□□□□ -0.32
LDLRAD4-204ENST00000435606 E9PSI1 815 aa13.06□□□□□ -0.32
LDLRAD4-204ENST00000435606 RRP7AQ9Y3A4 280 aaKnown RBP13.06□□□□□ -0.32
LDLRAD4-204ENST00000435606 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
LDLRAD4-204ENST00000435606 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.32
LDLRAD4-204ENST00000435606 ZKSCAN2Q63HK3 967 aa13.05□□□□□ -0.32
LDLRAD4-204ENST00000435606 SLKQ9H2G2 1235 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD4-204ENST00000435606 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
LDLRAD4-204ENST00000435606 STAC3Q96MF2 364 aa13.05□□□□□ -0.32
LDLRAD4-204ENST00000435606 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD4-204ENST00000435606 ANKRD45Q5TZF3 282 aa13.04□□□□□ -0.32
LDLRAD4-204ENST00000435606 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
LDLRAD4-204ENST00000435606 HOOK1Q9UJC3 728 aaKnown RBP13.04□□□□□ -0.32
LDLRAD4-204ENST00000435606 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
LDLRAD4-204ENST00000435606 RNF20Q5VTR2 975 aa13.03□□□□□ -0.32
LDLRAD4-204ENST00000435606 CPLX1O14810 134 aa13.03□□□□□ -0.32
LDLRAD4-204ENST00000435606 NLRP2Q9NX02 1062 aa13.02□□□□□ -0.32
LDLRAD4-204ENST00000435606 ANKRD20A12PQ8NF67 263 aa13.02□□□□□ -0.32
LDLRAD4-204ENST00000435606 GZF1Q9H116 711 aaPredicted RBP13.02□□□□□ -0.32
LDLRAD4-204ENST00000435606 CUX1P39880 1505 aa13.02□□□□□ -0.32
LDLRAD4-204ENST00000435606 HSP90AB4PQ58FF6 505 aa13.02□□□□□ -0.33
LDLRAD4-204ENST00000435606 MCTP1Q6DN14 999 aa13.02□□□□□ -0.33
LDLRAD4-204ENST00000435606 NFXL1Q6ZNB6 911 aa13.02□□□□□ -0.33
LDLRAD4-204ENST00000435606 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.33
LDLRAD4-204ENST00000435606 API5Q9BZZ5 524 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-204ENST00000435606 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
LDLRAD4-204ENST00000435606 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
LDLRAD4-204ENST00000435606 MYOM3Q5VTT5 1437 aa13.01□□□□□ -0.33
LDLRAD4-204ENST00000435606 CCDC70Q6NSX1 233 aa13.01□□□□□ -0.33
LDLRAD4-204ENST00000435606 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
LDLRAD4-204ENST00000435606 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
LDLRAD4-204ENST00000435606 REC8O95072 547 aa13□□□□□ -0.33
LDLRAD4-204ENST00000435606 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
LDLRAD4-204ENST00000435606 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
LDLRAD4-204ENST00000435606 KIF6Q6ZMV9 814 aa13□□□□□ -0.33
LDLRAD4-204ENST00000435606 ARHGAP5Q13017 1502 aa13□□□□□ -0.33
LDLRAD4-204ENST00000435606 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
LDLRAD4-204ENST00000435606 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
LDLRAD4-204ENST00000435606 RIPK4P57078 832 aa12.99□□□□□ -0.33
LDLRAD4-204ENST00000435606 PCMTD1Q96MG8 357 aaPredicted RBP12.99□□□□□ -0.33
LDLRAD4-204ENST00000435606 DDX19BQ9UMR2 479 aa12.99□□□□□ -0.33
LDLRAD4-204ENST00000435606 USP47Q96K76 1375 aa12.99□□□□□ -0.33
LDLRAD4-204ENST00000435606 ERC2O15083 957 aa12.98□□□□□ -0.33
LDLRAD4-204ENST00000435606 GOLGA6L3A6NEY3 463 aa12.98□□□□□ -0.33
LDLRAD4-204ENST00000435606 IPO7O95373 1038 aaKnown RBP12.98□□□□□ -0.33
LDLRAD4-204ENST00000435606 ANO2Q9NQ90 1003 aa12.98□□□□□ -0.33
LDLRAD4-204ENST00000435606 BECN2A8MW95 431 aa12.98□□□□□ -0.33
LDLRAD4-204ENST00000435606 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
LDLRAD4-204ENST00000435606 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
LDLRAD4-204ENST00000435606 DDX11L8A8MPP1 907 aa12.97□□□□□ -0.33
LDLRAD4-204ENST00000435606 CCDC27Q2M243 656 aa12.97□□□□□ -0.33
LDLRAD4-204ENST00000435606 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
LDLRAD4-204ENST00000435606 PROSER2Q86WR7 435 aaPredicted RBP12.97□□□□□ -0.33
LDLRAD4-204ENST00000435606 WWC2Q6AWC2 1192 aa12.97□□□□□ -0.33
LDLRAD4-204ENST00000435606 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
LDLRAD4-204ENST00000435606 GNAI1P63096 354 aa12.97□□□□□ -0.33
LDLRAD4-204ENST00000435606 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
LDLRAD4-204ENST00000435606 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
LDLRAD4-204ENST00000435606 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.34
LDLRAD4-204ENST00000435606 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 NLRP6P59044 892 aa12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 RALYLQ86SE5 291 aaKnown RBP12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 FOXD4L5Q5VV16 416 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 PPP1R1BQ9UD71 204 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD4-204ENST00000435606 XBP1P17861 261 aa12.94□□□□□ -0.34
LDLRAD4-204ENST00000435606 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
LDLRAD4-204ENST00000435606 SLC3A2P08195 630 aaKnown RBP12.94□□□□□ -0.34
LDLRAD4-204ENST00000435606 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
LDLRAD4-204ENST00000435606 TXNDC2Q86VQ3 553 aa12.94□□□□□ -0.34
LDLRAD4-204ENST00000435606 POGZQ7Z3K3 1410 aa12.93□□□□□ -0.34
LDLRAD4-204ENST00000435606 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
LDLRAD4-204ENST00000435606 PLEKHO1Q53GL0 409 aaPredicted RBP12.93□□□□□ -0.34
LDLRAD4-204ENST00000435606 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
LDLRAD4-204ENST00000435606 TBC1D2BQ9UPU7 963 aa12.93□□□□□ -0.34
LDLRAD4-204ENST00000435606 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
LDLRAD4-204ENST00000435606 FYB1O15117 783 aa12.92□□□□□ -0.34
LDLRAD4-204ENST00000435606 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
LDLRAD4-204ENST00000435606 ODF2Q5BJF6 829 aa12.92□□□□□ -0.34
LDLRAD4-204ENST00000435606 NINLQ9Y2I6 1382 aa12.92□□□□□ -0.34
LDLRAD4-204ENST00000435606 WASHC4Q2M389 1173 aa12.92□□□□□ -0.34
LDLRAD4-204ENST00000435606 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms