RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 PTPRTO14522 1441 aa25.85■■□□□ 1.73
FAM3A-212ENST00000434658 UBR1Q8IWV7 1749 aa25.85■■□□□ 1.73
FAM3A-212ENST00000434658 NCKAP5LQ9HCH0 1330 aa25.85■■□□□ 1.73
FAM3A-212ENST00000434658 PLA2R1Q13018 1463 aa25.85■■□□□ 1.73
FAM3A-212ENST00000434658 SPHKAPQ2M3C7 1700 aa25.83■■□□□ 1.73
FAM3A-212ENST00000434658 SPATA31E1Q6ZUB1 1445 aa25.82■■□□□ 1.72
FAM3A-212ENST00000434658 SUPT16HQ9Y5B9 1047 aaKnown RBP25.82■■□□□ 1.72
FAM3A-212ENST00000434658 DMRT2Q9Y5R5 561 aa25.81■■□□□ 1.72
FAM3A-212ENST00000434658 CHGAP10645 457 aaKnown RBP25.8■■□□□ 1.72
FAM3A-212ENST00000434658 ANKLE2Q86XL3 938 aa25.8■■□□□ 1.72
FAM3A-212ENST00000434658 CCDC7Q96M83 1385 aa25.79■■□□□ 1.72
FAM3A-212ENST00000434658 ADGRB3O60242 1522 aa25.78■■□□□ 1.72
FAM3A-212ENST00000434658 KDM5AP29375 1690 aaKnown RBP25.78■■□□□ 1.72
FAM3A-212ENST00000434658 TRPM2O94759 1503 aa25.77■■□□□ 1.72
FAM3A-212ENST00000434658 TMEM2Q9UHN6 1383 aa25.74■■□□□ 1.71
FAM3A-212ENST00000434658 TMEM131LA2VDJ0 1609 aa25.74■■□□□ 1.71
FAM3A-212ENST00000434658 TXNDC2Q86VQ3 553 aa25.74■■□□□ 1.71
FAM3A-212ENST00000434658 SLIT1O75093 1534 aa25.74■■□□□ 1.71
FAM3A-212ENST00000434658 ARHGAP23Q9P227 1491 aa25.73■■□□□ 1.71
FAM3A-212ENST00000434658 CLTCL1P53675 1640 aa25.72■■□□□ 1.71
FAM3A-212ENST00000434658 EID1Q9Y6B2 187 aa25.72■■□□□ 1.71
FAM3A-212ENST00000434658 C11orf95C9JLR9 678 aaPredicted RBP25.71■■□□□ 1.71
FAM3A-212ENST00000434658 LTKP29376 864 aa25.71■■□□□ 1.71
FAM3A-212ENST00000434658 MYO5BQ9ULV0 1848 aa25.71■■□□□ 1.71
FAM3A-212ENST00000434658 NEURL4Q96JN8 1562 aa25.69■■□□□ 1.7
FAM3A-212ENST00000434658 SCAF11Q99590 1463 aaKnown RBP25.68■■□□□ 1.7
FAM3A-212ENST00000434658 CCDC144AA2RUR9 1427 aa25.67■■□□□ 1.7
FAM3A-212ENST00000434658 NPHP4O75161 1426 aaPredicted RBP25.67■■□□□ 1.7
FAM3A-212ENST00000434658 HDGFP51858 240 aaKnown RBP25.66■■□□□ 1.7
FAM3A-212ENST00000434658 MED14O60244 1454 aa25.66■■□□□ 1.7
FAM3A-212ENST00000434658 RALGAPBQ86X10 1494 aa25.65■■□□□ 1.7
FAM3A-212ENST00000434658 RIMS2Q9UQ26 1411 aa25.65■■□□□ 1.7
FAM3A-212ENST00000434658 ZNF326Q5BKZ1 582 aaKnown RBP25.65■■□□□ 1.7
FAM3A-212ENST00000434658 KIF7Q2M1P5 1343 aa25.64■■□□□ 1.7
FAM3A-212ENST00000434658 KIF1BO60333 1816 aa25.63■■□□□ 1.69
FAM3A-212ENST00000434658 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
FAM3A-212ENST00000434658 NUTM2DQ5VT03 806 aaPredicted RBP25.62■■□□□ 1.69
FAM3A-212ENST00000434658 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.61■■□□□ 1.69
FAM3A-212ENST00000434658 USP47Q96K76 1375 aa25.61■■□□□ 1.69
FAM3A-212ENST00000434658 IQGAP1P46940 1657 aa25.6■■□□□ 1.69
FAM3A-212ENST00000434658 BCANQ96GW7 911 aa25.58■■□□□ 1.68
FAM3A-212ENST00000434658 SENP3Q9H4L4 574 aaPredicted RBP25.57■■□□□ 1.68
FAM3A-212ENST00000434658 PRKRIP1Q9H875 184 aaPredicted RBP25.57■■□□□ 1.68
FAM3A-212ENST00000434658 RGL3Q3MIN7 710 aa25.54■■□□□ 1.68
FAM3A-212ENST00000434658 ZNF335Q9H4Z2 1342 aaPredicted RBP25.53■■□□□ 1.68
FAM3A-212ENST00000434658 PLEKHG1Q9ULL1 1385 aa25.53■■□□□ 1.68
FAM3A-212ENST00000434658 SLC26A8Q96RN1 970 aa25.52■■□□□ 1.68
FAM3A-212ENST00000434658 RPGRIP1LQ68CZ1 1315 aa25.52■■□□□ 1.68
FAM3A-212ENST00000434658 NEXMIFQ5QGS0 1516 aa25.51■■□□□ 1.67
FAM3A-212ENST00000434658 VGFO15240 615 aaPredicted RBP25.47■■□□□ 1.67
FAM3A-212ENST00000434658 HNRNPUQ00839 825 aaKnown RBP eCLIP25.47■■□□□ 1.67
FAM3A-212ENST00000434658 FKBP8Q14318 412 aa25.47■■□□□ 1.67
FAM3A-212ENST00000434658 TRPM1Q7Z4N2 1603 aa25.45■■□□□ 1.66
FAM3A-212ENST00000434658 LTBP4Q8N2S1 1624 aa25.45■■□□□ 1.66
FAM3A-212ENST00000434658 NEFLP07196 543 aa25.44■■□□□ 1.66
FAM3A-212ENST00000434658 CCDC184Q52MB2 194 aa25.44■■□□□ 1.66
FAM3A-212ENST00000434658 CARD11Q9BXL7 1154 aa25.44■■□□□ 1.66
FAM3A-212ENST00000434658 ROCK2O75116 1388 aaKnown RBP25.43■■□□□ 1.66
FAM3A-212ENST00000434658 TBX22Q9Y458 520 aa25.43■■□□□ 1.66
FAM3A-212ENST00000434658 PPLO60437 1756 aa25.43■■□□□ 1.66
FAM3A-212ENST00000434658 CERKQ8TCT0 537 aa25.42■■□□□ 1.66
FAM3A-212ENST00000434658 DCAF11Q8TEB1 546 aa25.42■■□□□ 1.66
FAM3A-212ENST00000434658 ADAMTS13Q76LX8 1427 aa25.42■■□□□ 1.66
FAM3A-212ENST00000434658 PRAG1Q86YV5 1406 aa25.41■■□□□ 1.66
FAM3A-212ENST00000434658 MRS2Q9HD23 443 aa25.4■■□□□ 1.66
FAM3A-212ENST00000434658 LAMC1P11047 1609 aa25.39■■□□□ 1.66
FAM3A-212ENST00000434658 SETBP1Q9Y6X0 1596 aa25.38■■□□□ 1.65
FAM3A-212ENST00000434658 KDM2AQ9Y2K7 1162 aa25.38■■□□□ 1.65
FAM3A-212ENST00000434658 ADGRF5Q8IZF2 1346 aa25.38■■□□□ 1.65
FAM3A-212ENST00000434658 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
FAM3A-212ENST00000434658 KCNA6P17658 529 aa25.37■■□□□ 1.65
FAM3A-212ENST00000434658 IFT172Q9UG01 1749 aa25.36■■□□□ 1.65
FAM3A-212ENST00000434658 STRCP1A6NGW2 1772 aa25.36■■□□□ 1.65
FAM3A-212ENST00000434658 CPS1P31327 1500 aa25.36■■□□□ 1.65
FAM3A-212ENST00000434658 DIP2AQ14689 1571 aa25.35■■□□□ 1.65
FAM3A-212ENST00000434658 GPRASP1Q5JY77 1395 aa25.33■■□□□ 1.65
FAM3A-212ENST00000434658 PIK3R4Q99570 1358 aa25.31■■□□□ 1.64
FAM3A-212ENST00000434658 ST20-MTHFSA0A0A6YYL1 179 aa25.3■■□□□ 1.64
FAM3A-212ENST00000434658 METP08581 1390 aa25.3■■□□□ 1.64
FAM3A-212ENST00000434658 CHD2O14647 1828 aaKnown RBP25.29■■□□□ 1.64
FAM3A-212ENST00000434658 ZBED9Q6R2W3 1325 aa25.29■■□□□ 1.64
FAM3A-212ENST00000434658 FAM9BQ8IZU0 186 aa25.29■■□□□ 1.64
FAM3A-212ENST00000434658 ALKQ9UM73 1620 aa25.29■■□□□ 1.64
FAM3A-212ENST00000434658 MYOM2P54296 1465 aa25.29■■□□□ 1.64
FAM3A-212ENST00000434658 POLR3GLQ9BT43 218 aa25.28■■□□□ 1.64
FAM3A-212ENST00000434658 AMOTL2Q9Y2J4 779 aa25.28■■□□□ 1.64
FAM3A-212ENST00000434658 LRRC7Q96NW7 1537 aa25.27■■□□□ 1.64
FAM3A-212ENST00000434658 NWD1Q149M9 1564 aa25.27■■□□□ 1.64
FAM3A-212ENST00000434658 PIK3C2GO75747 1445 aa25.27■■□□□ 1.64
FAM3A-212ENST00000434658 PROSER2Q86WR7 435 aaPredicted RBP25.26■■□□□ 1.63
FAM3A-212ENST00000434658 STAC3Q96MF2 364 aa25.26■■□□□ 1.63
FAM3A-212ENST00000434658 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
FAM3A-212ENST00000434658 IQSEC2Q5JU85 1478 aa25.25■■□□□ 1.63
FAM3A-212ENST00000434658 NRXN1Q9ULB1 1477 aa25.25■■□□□ 1.63
FAM3A-212ENST00000434658 SETD1AO15047 1707 aaKnown RBP25.23■■□□□ 1.63
FAM3A-212ENST00000434658 RBM33Q96EV2 1170 aaKnown RBP25.23■■□□□ 1.63
FAM3A-212ENST00000434658 KTN1Q86UP2 1357 aaKnown RBP25.23■■□□□ 1.63
FAM3A-212ENST00000434658 NKTRP30414 1462 aaKnown RBP25.22■■□□□ 1.63
FAM3A-212ENST00000434658 C14orf93Q9H972 538 aaKnown RBP25.22■■□□□ 1.63
FAM3A-212ENST00000434658 TSHZ2Q9NRE2 1034 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms