RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 ARXQ96QS3 562 aa10.35□□□□□ -0.75
PTP4A1P3-201ENST00000433661 KIAA1468Q9P260 1216 aa10.35□□□□□ -0.75
PTP4A1P3-201ENST00000433661 ERBB3P21860 1342 aa10.34□□□□□ -0.75
PTP4A1P3-201ENST00000433661 ST18O60284 1047 aa10.34□□□□□ -0.75
PTP4A1P3-201ENST00000433661 BANK1Q8NDB2 785 aa10.34□□□□□ -0.75
PTP4A1P3-201ENST00000433661 A6NJR5 290 aa10.33□□□□□ -0.76
PTP4A1P3-201ENST00000433661 MCM6Q14566 821 aa10.33□□□□□ -0.76
PTP4A1P3-201ENST00000433661 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
PTP4A1P3-201ENST00000433661 LAPTM4BQ86VI4 370 aa10.33□□□□□ -0.76
PTP4A1P3-201ENST00000433661 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
PTP4A1P3-201ENST00000433661 PSEN2P49810 448 aa10.32□□□□□ -0.76
PTP4A1P3-201ENST00000433661 USP46P62068 366 aa10.32□□□□□ -0.76
PTP4A1P3-201ENST00000433661 TK2O00142 265 aa10.31□□□□□ -0.76
PTP4A1P3-201ENST00000433661 RSPH4AQ5TD94 716 aa10.31□□□□□ -0.76
PTP4A1P3-201ENST00000433661 RSBN1LQ6PCB5 846 aaPredicted RBP10.31□□□□□ -0.76
PTP4A1P3-201ENST00000433661 FAM98CQ17RN3 349 aaKnown RBP10.3□□□□□ -0.76
PTP4A1P3-201ENST00000433661 RIC3Q7Z5B4 369 aa10.3□□□□□ -0.76
PTP4A1P3-201ENST00000433661 POLR3EQ9NVU0 708 aa10.3□□□□□ -0.76
PTP4A1P3-201ENST00000433661 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
PTP4A1P3-201ENST00000433661 VPS9D1Q9Y2B5 631 aa10.3□□□□□ -0.76
PTP4A1P3-201ENST00000433661 SPDYE5A6NIY4 337 aa10.29□□□□□ -0.76
PTP4A1P3-201ENST00000433661 DDX11L8A8MPP1 907 aa10.29□□□□□ -0.76
PTP4A1P3-201ENST00000433661 BHMG1C9JSJ3 638 aaPredicted RBP10.29□□□□□ -0.76
PTP4A1P3-201ENST00000433661 GCGRP47871 477 aa10.29□□□□□ -0.76
PTP4A1P3-201ENST00000433661 TMEM259Q4ZIN3 620 aa10.29□□□□□ -0.76
PTP4A1P3-201ENST00000433661 EMP3P54852 163 aa10.28□□□□□ -0.76
PTP4A1P3-201ENST00000433661 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
PTP4A1P3-201ENST00000433661 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
PTP4A1P3-201ENST00000433661 NUTM1Q86Y26 1132 aa10.28□□□□□ -0.76
PTP4A1P3-201ENST00000433661 SMAPO00193 183 aa10.27□□□□□ -0.77
PTP4A1P3-201ENST00000433661 RFC5P40937 340 aa10.27□□□□□ -0.77
PTP4A1P3-201ENST00000433661 LILRB3O75022 631 aa10.26□□□□□ -0.77
PTP4A1P3-201ENST00000433661 KDM4AO75164 1064 aa10.26□□□□□ -0.77
PTP4A1P3-201ENST00000433661 SLC10A3P09131 477 aa10.25□□□□□ -0.77
PTP4A1P3-201ENST00000433661 NBPF3Q9H094 633 aa10.25□□□□□ -0.77
PTP4A1P3-201ENST00000433661 MOXD2PA6NHM9 499 aa10.24□□□□□ -0.77
PTP4A1P3-201ENST00000433661 SWT1Q5T5J6 900 aaKnown RBP10.24□□□□□ -0.77
PTP4A1P3-201ENST00000433661 HOXA2O43364 376 aa10.23□□□□□ -0.77
PTP4A1P3-201ENST00000433661 SLC4A3P48751 1232 aa10.23□□□□□ -0.77
PTP4A1P3-201ENST00000433661 SLF2Q8IX21 1173 aa10.23□□□□□ -0.77
PTP4A1P3-201ENST00000433661 RDH13Q8NBN7 331 aa10.23□□□□□ -0.77
PTP4A1P3-201ENST00000433661 HDGFP51858 240 aaKnown RBP10.22□□□□□ -0.77
PTP4A1P3-201ENST00000433661 FBXO31Q5XUX0 539 aaPredicted RBP10.22□□□□□ -0.77
PTP4A1P3-201ENST00000433661 NECTIN2Q92692 538 aa10.22□□□□□ -0.77
PTP4A1P3-201ENST00000433661 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
PTP4A1P3-201ENST00000433661 UBTFP17480 764 aaKnown RBP10.21□□□□□ -0.77
PTP4A1P3-201ENST00000433661 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.77
PTP4A1P3-201ENST00000433661 FNBP4Q8N3X1 1017 aaPredicted RBP10.2□□□□□ -0.78
PTP4A1P3-201ENST00000433661 HS3ST6Q96QI5 342 aa10.2□□□□□ -0.78
PTP4A1P3-201ENST00000433661 SEPT9Q9UHD8 586 aaPredicted RBP10.2□□□□□ -0.78
PTP4A1P3-201ENST00000433661 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
PTP4A1P3-201ENST00000433661 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
PTP4A1P3-201ENST00000433661 POTEB3A0JP26 581 aa10.18□□□□□ -0.78
PTP4A1P3-201ENST00000433661 HRO43593 1189 aa10.18□□□□□ -0.78
PTP4A1P3-201ENST00000433661 TRAK2O60296 914 aa10.18□□□□□ -0.78
PTP4A1P3-201ENST00000433661 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
PTP4A1P3-201ENST00000433661 POTEBQ6S5H4 581 aa10.18□□□□□ -0.78
PTP4A1P3-201ENST00000433661 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
PTP4A1P3-201ENST00000433661 NDUFV2P19404 249 aa10.17□□□□□ -0.78
PTP4A1P3-201ENST00000433661 QPCTQ16769 361 aa10.17□□□□□ -0.78
PTP4A1P3-201ENST00000433661 ZFRQ96KR1 1074 aaKnown RBP10.17□□□□□ -0.78
PTP4A1P3-201ENST00000433661 PCDHB15Q9Y5E8 787 aa10.17□□□□□ -0.78
PTP4A1P3-201ENST00000433661 APBB1O00213 710 aa10.16□□□□□ -0.78
PTP4A1P3-201ENST00000433661 FDX1P10109 184 aa10.16□□□□□ -0.78
PTP4A1P3-201ENST00000433661 LSM11P83369 360 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTP4A1P3-201ENST00000433661 GRIPAP1Q4V328 841 aa10.16□□□□□ -0.78
PTP4A1P3-201ENST00000433661 SAMD7Q7Z3H4 446 aa10.16□□□□□ -0.78
PTP4A1P3-201ENST00000433661 ADGRD1Q6QNK2 874 aa10.15□□□□□ -0.78
PTP4A1P3-201ENST00000433661 HOMEZQ8IX15 550 aa10.15□□□□□ -0.78
PTP4A1P3-201ENST00000433661 CLUAP1Q96AJ1 413 aa10.15□□□□□ -0.78
PTP4A1P3-201ENST00000433661 PCDHGC3Q9UN70 934 aa10.15□□□□□ -0.78
PTP4A1P3-201ENST00000433661 HRCP23327 699 aa10.14□□□□□ -0.79
PTP4A1P3-201ENST00000433661 PROSER2Q86WR7 435 aaPredicted RBP10.14□□□□□ -0.79
PTP4A1P3-201ENST00000433661 MTMR14Q8NCE2 650 aa10.14□□□□□ -0.79
PTP4A1P3-201ENST00000433661 COG6Q9Y2V7 657 aa10.14□□□□□ -0.79
PTP4A1P3-201ENST00000433661 RAD21O60216 631 aa10.13□□□□□ -0.79
PTP4A1P3-201ENST00000433661 RTL5Q5HYW3 569 aaPredicted RBP10.13□□□□□ -0.79
PTP4A1P3-201ENST00000433661 MRPL50Q8N5N7 158 aaKnown RBP10.13□□□□□ -0.79
PTP4A1P3-201ENST00000433661 C1orf115Q9H7X2 142 aa10.13□□□□□ -0.79
PTP4A1P3-201ENST00000433661 SNRKQ9NRH2 765 aa10.13□□□□□ -0.79
PTP4A1P3-201ENST00000433661 CFHP08603 1231 aa10.12□□□□□ -0.79
PTP4A1P3-201ENST00000433661 ATP6V1AP38606 617 aa10.12□□□□□ -0.79
PTP4A1P3-201ENST00000433661 PRR14Q9BWN1 585 aa10.12□□□□□ -0.79
PTP4A1P3-201ENST00000433661 ATP1B4Q9UN42 357 aaPredicted RBP10.12□□□□□ -0.79
PTP4A1P3-201ENST00000433661 MTMR2Q13614 643 aa10.11□□□□□ -0.79
PTP4A1P3-201ENST00000433661 KMT5BQ4FZB7 885 aa10.11□□□□□ -0.79
PTP4A1P3-201ENST00000433661 ACTN4O43707 911 aaKnown RBP10.1□□□□□ -0.79
PTP4A1P3-201ENST00000433661 FUT2Q10981 343 aa10.1□□□□□ -0.79
PTP4A1P3-201ENST00000433661 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
PTP4A1P3-201ENST00000433661 USP17L8P0C7I0 530 aa10.09□□□□□ -0.79
PTP4A1P3-201ENST00000433661 CABLES1Q8TDN4 633 aa10.09□□□□□ -0.79
PTP4A1P3-201ENST00000433661 POM121Q96HA1 1249 aa10.09□□□□□ -0.79
PTP4A1P3-201ENST00000433661 LRCH3Q96II8 777 aa10.09□□□□□ -0.79
PTP4A1P3-201ENST00000433661 NUTM2BA6NNL0 878 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1P3-201ENST00000433661 NUTM2EB1AL46 878 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1P3-201ENST00000433661 NUTM2DQ5VT03 806 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1P3-201ENST00000433661 NUTM2AQ8IVF1 878 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1P3-201ENST00000433661 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
PTP4A1P3-201ENST00000433661 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.08□□□□□ -0.8
PTP4A1P3-201ENST00000433661 SALL2Q9Y467 1007 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms