RNA–Protein interactions for RNA: ENST00000433179.3

PERM1-202, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PERM1, Length 3,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-202ENST00000433179 B4GALNT3Q6L9W6 998 aa17.8■□□□□ 0.44
PERM1-202ENST00000433179 MYO3AQ8NEV4 1616 aa17.8■□□□□ 0.44
PERM1-202ENST00000433179 KIF7Q2M1P5 1343 aa17.79■□□□□ 0.44
PERM1-202ENST00000433179 MYOM2P54296 1465 aa17.79■□□□□ 0.44
PERM1-202ENST00000433179 SPAG9O60271 1321 aaKnown RBP17.79■□□□□ 0.44
PERM1-202ENST00000433179 RGL3Q3MIN7 710 aa17.77■□□□□ 0.44
PERM1-202ENST00000433179 MRS2Q9HD23 443 aa17.77■□□□□ 0.44
PERM1-202ENST00000433179 CCDC7Q96M83 1385 aa17.77■□□□□ 0.43
PERM1-202ENST00000433179 ARHGAP31Q2M1Z3 1444 aa17.76■□□□□ 0.43
PERM1-202ENST00000433179 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
PERM1-202ENST00000433179 PRKRIP1Q9H875 184 aaPredicted RBP17.75■□□□□ 0.43
PERM1-202ENST00000433179 CCDC144AA2RUR9 1427 aa17.74■□□□□ 0.43
PERM1-202ENST00000433179 SYNMO15061 1565 aa17.73■□□□□ 0.43
PERM1-202ENST00000433179 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
PERM1-202ENST00000433179 DCAF11Q8TEB1 546 aa17.72■□□□□ 0.43
PERM1-202ENST00000433179 ARHGEF40Q8TER5 1519 aa17.72■□□□□ 0.43
PERM1-202ENST00000433179 SETBP1Q9Y6X0 1596 aa17.72■□□□□ 0.43
PERM1-202ENST00000433179 PREX1Q8TCU6 1659 aa17.71■□□□□ 0.43
PERM1-202ENST00000433179 ARID4BQ4LE39 1312 aaPredicted RBP17.7■□□□□ 0.42
PERM1-202ENST00000433179 CNTLNQ9NXG0 1405 aa17.7■□□□□ 0.42
PERM1-202ENST00000433179 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
PERM1-202ENST00000433179 NOS1P29475 1434 aa17.7■□□□□ 0.42
PERM1-202ENST00000433179 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
PERM1-202ENST00000433179 KDM5AP29375 1690 aaKnown RBP17.67■□□□□ 0.42
PERM1-202ENST00000433179 CARD11Q9BXL7 1154 aa17.67■□□□□ 0.42
PERM1-202ENST00000433179 USP47Q96K76 1375 aa17.66■□□□□ 0.42
PERM1-202ENST00000433179 PKNOX2Q96KN3 472 aa17.65■□□□□ 0.42
PERM1-202ENST00000433179 MYOM1P52179 1685 aa17.65■□□□□ 0.42
PERM1-202ENST00000433179 ST20-MTHFSA0A0A6YYL1 179 aa17.65■□□□□ 0.42
PERM1-202ENST00000433179 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
PERM1-202ENST00000433179 NPATQ14207 1427 aa17.64■□□□□ 0.41
PERM1-202ENST00000433179 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
PERM1-202ENST00000433179 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
PERM1-202ENST00000433179 NBPF1Q3BBV0 1214 aa17.62■□□□□ 0.41
PERM1-202ENST00000433179 UGGT1Q9NYU2 1555 aa17.61■□□□□ 0.41
PERM1-202ENST00000433179 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
PERM1-202ENST00000433179 TSPOAP1O95153 1857 aa17.61■□□□□ 0.41
PERM1-202ENST00000433179 ANP32AP39687 249 aaKnown RBP17.61■□□□□ 0.41
PERM1-202ENST00000433179 NEXMIFQ5QGS0 1516 aa17.6■□□□□ 0.41
PERM1-202ENST00000433179 KANK1Q14678 1352 aa17.6■□□□□ 0.41
PERM1-202ENST00000433179 SPATA31D1Q6ZQQ2 1576 aa17.59■□□□□ 0.41
PERM1-202ENST00000433179 SETD1AO15047 1707 aaKnown RBP17.59■□□□□ 0.41
PERM1-202ENST00000433179 YEATS2Q9ULM3 1422 aa17.58■□□□□ 0.41
PERM1-202ENST00000433179 ADGRB1O14514 1584 aa17.58■□□□□ 0.41
PERM1-202ENST00000433179 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.4
PERM1-202ENST00000433179 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
PERM1-202ENST00000433179 LAS1LQ9Y4W2 734 aaKnown RBP17.54■□□□□ 0.4
PERM1-202ENST00000433179 ZFYVE9O95405 1425 aa17.54■□□□□ 0.4
PERM1-202ENST00000433179 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
PERM1-202ENST00000433179 CLTCQ00610 1675 aaKnown RBP17.53■□□□□ 0.4
PERM1-202ENST00000433179 PIK3C2GO75747 1445 aa17.53■□□□□ 0.4
PERM1-202ENST00000433179 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
PERM1-202ENST00000433179 ROCK2O75116 1388 aaKnown RBP17.52■□□□□ 0.39
PERM1-202ENST00000433179 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
PERM1-202ENST00000433179 NEFMP07197 916 aa17.51■□□□□ 0.39
PERM1-202ENST00000433179 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
PERM1-202ENST00000433179 IPO9Q96P70 1041 aaKnown RBP17.49■□□□□ 0.39
PERM1-202ENST00000433179 SCAF11Q99590 1463 aaKnown RBP17.48■□□□□ 0.39
PERM1-202ENST00000433179 TMC1Q8TDI8 760 aa17.48■□□□□ 0.39
PERM1-202ENST00000433179 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
PERM1-202ENST00000433179 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
PERM1-202ENST00000433179 ERVK-7P63135 1459 aa17.46■□□□□ 0.39
PERM1-202ENST00000433179 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
PERM1-202ENST00000433179 SBNO2Q9Y2G9 1366 aa17.46■□□□□ 0.38
PERM1-202ENST00000433179 QRICH2Q9H0J4 1663 aa17.45■□□□□ 0.38
PERM1-202ENST00000433179 KIF3BO15066 747 aa17.45■□□□□ 0.38
PERM1-202ENST00000433179 ASXL1Q8IXJ9 1541 aa17.44■□□□□ 0.38
PERM1-202ENST00000433179 RAPGEF3O95398 923 aa17.44■□□□□ 0.38
PERM1-202ENST00000433179 TESK2Q96S53 571 aa17.44■□□□□ 0.38
PERM1-202ENST00000433179 ZBED9Q6R2W3 1325 aa17.43■□□□□ 0.38
PERM1-202ENST00000433179 KTN1Q86UP2 1357 aaKnown RBP17.43■□□□□ 0.38
PERM1-202ENST00000433179 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
PERM1-202ENST00000433179 NRXN3Q9Y4C0 1643 aa17.42■□□□□ 0.38
PERM1-202ENST00000433179 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
PERM1-202ENST00000433179 GGT6Q6P531 493 aa17.4■□□□□ 0.38
PERM1-202ENST00000433179 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.38
PERM1-202ENST00000433179 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
PERM1-202ENST00000433179 FAM69CQ0P6D2 419 aa17.37■□□□□ 0.37
PERM1-202ENST00000433179 DISP3Q9P2K9 1392 aa17.36■□□□□ 0.37
PERM1-202ENST00000433179 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
PERM1-202ENST00000433179 INSRP06213 1382 aa17.35■□□□□ 0.37
PERM1-202ENST00000433179 CHGAP10645 457 aaKnown RBP17.35■□□□□ 0.37
PERM1-202ENST00000433179 CFAP65Q6ZU64 1925 aaKnown RBP17.34■□□□□ 0.37
PERM1-202ENST00000433179 PANK3Q9H999 370 aa17.34■□□□□ 0.37
PERM1-202ENST00000433179 GLIPR1L2Q4G1C9 344 aa17.33■□□□□ 0.37
PERM1-202ENST00000433179 DLC1Q96QB1 1528 aa17.33■□□□□ 0.36
PERM1-202ENST00000433179 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
PERM1-202ENST00000433179 CDCA7LQ96GN5 454 aa17.32■□□□□ 0.36
PERM1-202ENST00000433179 PODXL2Q9NZ53 605 aa17.32■□□□□ 0.36
PERM1-202ENST00000433179 WASHC2CQ9Y4E1 1318 aa17.31■□□□□ 0.36
PERM1-202ENST00000433179 C3P01024 1663 aa17.31■□□□□ 0.36
PERM1-202ENST00000433179 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
PERM1-202ENST00000433179 NUDCQ9Y266 331 aa17.31■□□□□ 0.36
PERM1-202ENST00000433179 NPC1L1Q9UHC9 1359 aa17.3■□□□□ 0.36
PERM1-202ENST00000433179 A2ML1A8K2U0 1454 aa17.29■□□□□ 0.36
PERM1-202ENST00000433179 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
PERM1-202ENST00000433179 MLECQ14165 292 aa17.29■□□□□ 0.36
PERM1-202ENST00000433179 ANKRD26Q9UPS8 1709 aa17.28■□□□□ 0.36
PERM1-202ENST00000433179 ALKQ9UM73 1620 aa17.28■□□□□ 0.36
PERM1-202ENST00000433179 SLC24A1O60721 1099 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms