RNA–Protein interactions for RNA: ENST00000433119.5

HDAC11-211, Transcript of histone deacetylase 11, humanhuman

TSL 1 (best) BASIC

Gene HDAC11, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-211ENST00000433119 TESK2Q96S53 571 aa28.66■■■□□ 2.18
HDAC11-211ENST00000433119 CLTCQ00610 1675 aaKnown RBP28.66■■■□□ 2.18
HDAC11-211ENST00000433119 PPP6R1Q9UPN7 881 aa28.65■■■□□ 2.18
HDAC11-211ENST00000433119 NRXN1Q9ULB1 1477 aa28.65■■■□□ 2.18
HDAC11-211ENST00000433119 MLECQ14165 292 aa28.65■■■□□ 2.18
HDAC11-211ENST00000433119 IDI1Q13907 227 aa28.64■■■□□ 2.18
HDAC11-211ENST00000433119 CFAP70Q5T0N1 1121 aa28.64■■■□□ 2.18
HDAC11-211ENST00000433119 FBXO31Q5XUX0 539 aaPredicted RBP28.63■■■□□ 2.17
HDAC11-211ENST00000433119 SCAF11Q99590 1463 aaKnown RBP28.61■■■□□ 2.17
HDAC11-211ENST00000433119 PRKRIP1Q9H875 184 aaPredicted RBP28.6■■■□□ 2.17
HDAC11-211ENST00000433119 SLC52A1Q9NWF4 448 aa28.6■■■□□ 2.17
HDAC11-211ENST00000433119 RPGRIP1LQ68CZ1 1315 aa28.6■■■□□ 2.17
HDAC11-211ENST00000433119 DISP3Q9P2K9 1392 aa28.58■■■□□ 2.17
HDAC11-211ENST00000433119 MYO5BQ9ULV0 1848 aa28.58■■■□□ 2.17
HDAC11-211ENST00000433119 ERVK-7P63135 1459 aa28.57■■■□□ 2.16
HDAC11-211ENST00000433119 TRHP20396 242 aaPredicted RBP28.56■■■□□ 2.16
HDAC11-211ENST00000433119 NEXMIFQ5QGS0 1516 aa28.55■■■□□ 2.16
HDAC11-211ENST00000433119 PIK3C2GO75747 1445 aa28.55■■■□□ 2.16
HDAC11-211ENST00000433119 TMEM131LA2VDJ0 1609 aa28.53■■■□□ 2.16
HDAC11-211ENST00000433119 TMF1P82094 1093 aa28.53■■■□□ 2.16
HDAC11-211ENST00000433119 NUTM2DQ5VT03 806 aaPredicted RBP28.52■■■□□ 2.16
HDAC11-211ENST00000433119 C14orf93Q9H972 538 aaKnown RBP28.49■■■□□ 2.15
HDAC11-211ENST00000433119 SCAF1Q9H7N4 1312 aaKnown RBP28.49■■■□□ 2.15
HDAC11-211ENST00000433119 SETBP1Q9Y6X0 1596 aa28.48■■■□□ 2.15
HDAC11-211ENST00000433119 EIF3AQ14152 1382 aaKnown RBP28.48■■■□□ 2.15
HDAC11-211ENST00000433119 VGFO15240 615 aaPredicted RBP28.48■■■□□ 2.15
HDAC11-211ENST00000433119 CCDC184Q52MB2 194 aa28.47■■■□□ 2.15
HDAC11-211ENST00000433119 SPATA31D1Q6ZQQ2 1576 aa28.47■■■□□ 2.15
HDAC11-211ENST00000433119 CNGB1Q14028 1251 aaPredicted RBP28.46■■■□□ 2.15
HDAC11-211ENST00000433119 ESF1Q9H501 851 aaKnown RBP28.45■■■□□ 2.15
HDAC11-211ENST00000433119 ZMYM3Q14202 1370 aa28.43■■■□□ 2.14
HDAC11-211ENST00000433119 ADGRB1O14514 1584 aa28.43■■■□□ 2.14
HDAC11-211ENST00000433119 ZFYVE9O95405 1425 aa28.41■■■□□ 2.14
HDAC11-211ENST00000433119 TMEM132EQ6IEE7 984 aa28.41■■■□□ 2.14
HDAC11-211ENST00000433119 STAG3Q9UJ98 1225 aa28.38■■■□□ 2.13
HDAC11-211ENST00000433119 MYO3AQ8NEV4 1616 aa28.38■■■□□ 2.13
HDAC11-211ENST00000433119 TRAK1Q9UPV9 953 aa28.36■■■□□ 2.13
HDAC11-211ENST00000433119 PER1O15534 1290 aaPredicted RBP28.36■■■□□ 2.13
HDAC11-211ENST00000433119 MRS2Q9HD23 443 aa28.36■■■□□ 2.13
HDAC11-211ENST00000433119 DNAJC5Q9H3Z4 198 aa28.35■■■□□ 2.13
HDAC11-211ENST00000433119 SENP3Q9H4L4 574 aaPredicted RBP28.35■■■□□ 2.13
HDAC11-211ENST00000433119 PANK3Q9H999 370 aa28.35■■■□□ 2.13
HDAC11-211ENST00000433119 GTF3C3Q9Y5Q9 886 aa28.35■■■□□ 2.13
HDAC11-211ENST00000433119 CDCA8Q53HL2 280 aa28.34■■■□□ 2.13
HDAC11-211ENST00000433119 A2ML1A8K2U0 1454 aa28.33■■■□□ 2.13
HDAC11-211ENST00000433119 CENPJQ9HC77 1338 aaPredicted RBP28.31■■■□□ 2.12
HDAC11-211ENST00000433119 KDM5AP29375 1690 aaKnown RBP28.31■■■□□ 2.12
HDAC11-211ENST00000433119 SLC24A1O60721 1099 aa28.28■■■□□ 2.12
HDAC11-211ENST00000433119 MYOM1P52179 1685 aa28.28■■■□□ 2.12
HDAC11-211ENST00000433119 QRICH2Q9H0J4 1663 aa28.28■■■□□ 2.12
HDAC11-211ENST00000433119 SBNO2Q9Y2G9 1366 aa28.28■■■□□ 2.12
HDAC11-211ENST00000433119 ASXL1Q8IXJ9 1541 aa28.26■■■□□ 2.11
HDAC11-211ENST00000433119 ARHGEF28Q8N1W1 1705 aaKnown RBP28.26■■■□□ 2.11
HDAC11-211ENST00000433119 KTN1Q86UP2 1357 aaKnown RBP28.25■■■□□ 2.11
HDAC11-211ENST00000433119 RALBP1Q15311 655 aa28.25■■■□□ 2.11
HDAC11-211ENST00000433119 FAM9BQ8IZU0 186 aa28.25■■■□□ 2.11
HDAC11-211ENST00000433119 TNRQ92752 1358 aa28.25■■■□□ 2.11
HDAC11-211ENST00000433119 RIMS2Q9UQ26 1411 aa28.24■■■□□ 2.11
HDAC11-211ENST00000433119 ALKQ9UM73 1620 aa28.21■■■□□ 2.11
HDAC11-211ENST00000433119 PARD3Q8TEW0 1356 aa28.21■■■□□ 2.11
HDAC11-211ENST00000433119 MYBBP1AQ9BQG0 1328 aaKnown RBP28.2■■■□□ 2.11
HDAC11-211ENST00000433119 HNRNPUQ00839 825 aaKnown RBP eCLIP28.2■■■□□ 2.11
HDAC11-211ENST00000433119 CEBPAP49715 358 aaPredicted RBP28.19■■■□□ 2.1
HDAC11-211ENST00000433119 CC2D1BQ5T0F9 858 aaKnown RBP28.19■■■□□ 2.1
HDAC11-211ENST00000433119 STK26Q9P289 416 aa28.19■■■□□ 2.1
HDAC11-211ENST00000433119 FER1L4A9Z1Z3 1794 aa28.18■■■□□ 2.1
HDAC11-211ENST00000433119 C3P01024 1663 aa28.16■■■□□ 2.1
HDAC11-211ENST00000433119 UBR1Q8IWV7 1749 aa28.15■■■□□ 2.1
HDAC11-211ENST00000433119 TMC1Q8TDI8 760 aa28.14■■■□□ 2.1
HDAC11-211ENST00000433119 YTHDC2Q9H6S0 1430 aaKnown RBP28.14■■■□□ 2.1
HDAC11-211ENST00000433119 KNSTRNQ9Y448 316 aa28.14■■■□□ 2.09
HDAC11-211ENST00000433119 BRD4O60885 1362 aaPredicted RBP28.12■■■□□ 2.09
HDAC11-211ENST00000433119 SETD1AO15047 1707 aaKnown RBP28.11■■■□□ 2.09
HDAC11-211ENST00000433119 PTPRMP28827 1452 aa28.11■■■□□ 2.09
HDAC11-211ENST00000433119 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
HDAC11-211ENST00000433119 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.11■■■□□ 2.09
HDAC11-211ENST00000433119 PNISRQ8TF01 805 aaKnown RBP28.1■■■□□ 2.09
HDAC11-211ENST00000433119 AMER1Q5JTC6 1135 aaPredicted RBP28.09■■■□□ 2.09
HDAC11-211ENST00000433119 NRXN3Q9Y4C0 1643 aa28.09■■■□□ 2.09
HDAC11-211ENST00000433119 PLPPR3Q6T4P5 718 aa28.09■■■□□ 2.09
HDAC11-211ENST00000433119 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
HDAC11-211ENST00000433119 NLRP13Q86W25 1043 aa28.08■■■□□ 2.09
HDAC11-211ENST00000433119 EVC2Q86UK5 1308 aa28.06■■■□□ 2.08
HDAC11-211ENST00000433119 NLRP1Q9C000 1473 aa28.06■■■□□ 2.08
HDAC11-211ENST00000433119 TMEM2Q9UHN6 1383 aa28.06■■■□□ 2.08
HDAC11-211ENST00000433119 PRAM1Q96QH2 718 aa28.06■■■□□ 2.08
HDAC11-211ENST00000433119 CARD14Q9BXL6 1004 aa28.05■■■□□ 2.08
HDAC11-211ENST00000433119 HDGFP51858 240 aaKnown RBP28.04■■■□□ 2.08
HDAC11-211ENST00000433119 SLC12A5Q9H2X9 1139 aa28.02■■■□□ 2.08
HDAC11-211ENST00000433119 POGKQ9P215 609 aa28.02■■■□□ 2.08
HDAC11-211ENST00000433119 PUS7Q96PZ0 661 aaKnown RBP28.01■■■□□ 2.07
HDAC11-211ENST00000433119 LRPPRCP42704 1394 aaKnown RBP28■■■□□ 2.07
HDAC11-211ENST00000433119 NPC1L1Q9UHC9 1359 aa28■■■□□ 2.07
HDAC11-211ENST00000433119 CABP2Q9NPB3 220 aa27.99■■■□□ 2.07
HDAC11-211ENST00000433119 MINK1Q8N4C8 1332 aaPredicted RBP27.99■■■□□ 2.07
HDAC11-211ENST00000433119 METP08581 1390 aa27.98■■■□□ 2.07
HDAC11-211ENST00000433119 DLC1Q96QB1 1528 aa27.97■■■□□ 2.07
HDAC11-211ENST00000433119 LTKP29376 864 aa27.96■■■□□ 2.07
HDAC11-211ENST00000433119 BCANQ96GW7 911 aa27.96■■■□□ 2.07
HDAC11-211ENST00000433119 ZBED9Q6R2W3 1325 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms