RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 MAP3K4Q9Y6R4 1608 aa19.84■□□□□ 0.77
RFTN1-203ENST00000432519 WASHC2CQ9Y4E1 1318 aa19.83■□□□□ 0.77
RFTN1-203ENST00000432519 SALL2Q9Y467 1007 aaPredicted RBP19.83■□□□□ 0.76
RFTN1-203ENST00000432519 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
RFTN1-203ENST00000432519 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
RFTN1-203ENST00000432519 NOS1P29475 1434 aa19.81■□□□□ 0.76
RFTN1-203ENST00000432519 NEO1Q92859 1461 aa19.81■□□□□ 0.76
RFTN1-203ENST00000432519 SMG6Q86US8 1419 aaKnown RBP19.81■□□□□ 0.76
RFTN1-203ENST00000432519 NEURL4Q96JN8 1562 aa19.81■□□□□ 0.76
RFTN1-203ENST00000432519 MYOM2P54296 1465 aa19.81■□□□□ 0.76
RFTN1-203ENST00000432519 YEATS2Q9ULM3 1422 aa19.81■□□□□ 0.76
RFTN1-203ENST00000432519 ABCC3O15438 1527 aa19.8■□□□□ 0.76
RFTN1-203ENST00000432519 NUDCQ9Y266 331 aa19.79■□□□□ 0.76
RFTN1-203ENST00000432519 DIP2CQ9Y2E4 1556 aa19.79■□□□□ 0.76
RFTN1-203ENST00000432519 ADGRB3O60242 1522 aa19.79■□□□□ 0.76
RFTN1-203ENST00000432519 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
RFTN1-203ENST00000432519 NUTM2DQ5VT03 806 aaPredicted RBP19.79■□□□□ 0.76
RFTN1-203ENST00000432519 KIAA1210Q9ULL0 1709 aa19.78■□□□□ 0.76
RFTN1-203ENST00000432519 RICTORQ6R327 1708 aa19.77■□□□□ 0.76
RFTN1-203ENST00000432519 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
RFTN1-203ENST00000432519 NRXN1Q9ULB1 1477 aa19.76■□□□□ 0.75
RFTN1-203ENST00000432519 MYOM1P52179 1685 aa19.76■□□□□ 0.75
RFTN1-203ENST00000432519 TMEM132EQ6IEE7 984 aa19.75■□□□□ 0.75
RFTN1-203ENST00000432519 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
RFTN1-203ENST00000432519 KNSTRNQ9Y448 316 aa19.74■□□□□ 0.75
RFTN1-203ENST00000432519 ERVK-7P63135 1459 aa19.74■□□□□ 0.75
RFTN1-203ENST00000432519 CAMSAP1Q5T5Y3 1602 aa19.73■□□□□ 0.75
RFTN1-203ENST00000432519 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
RFTN1-203ENST00000432519 EIF3AQ14152 1382 aaKnown RBP19.73■□□□□ 0.75
RFTN1-203ENST00000432519 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
RFTN1-203ENST00000432519 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
RFTN1-203ENST00000432519 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
RFTN1-203ENST00000432519 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
RFTN1-203ENST00000432519 FAM69CQ0P6D2 419 aa19.72■□□□□ 0.75
RFTN1-203ENST00000432519 SYNMO15061 1565 aa19.71■□□□□ 0.75
RFTN1-203ENST00000432519 PPLO60437 1756 aa19.71■□□□□ 0.75
RFTN1-203ENST00000432519 PIK3C2GO75747 1445 aa19.7■□□□□ 0.74
RFTN1-203ENST00000432519 PPP2R1AP30153 589 aa19.7■□□□□ 0.74
RFTN1-203ENST00000432519 PPP4R2Q9NY27 417 aa19.7■□□□□ 0.74
RFTN1-203ENST00000432519 CDCA8Q53HL2 280 aa19.69■□□□□ 0.74
RFTN1-203ENST00000432519 CDCA7LQ96GN5 454 aa19.69■□□□□ 0.74
RFTN1-203ENST00000432519 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
RFTN1-203ENST00000432519 RNF123Q5XPI4 1314 aa19.68■□□□□ 0.74
RFTN1-203ENST00000432519 C14orf93Q9H972 538 aaKnown RBP19.68■□□□□ 0.74
RFTN1-203ENST00000432519 IDI1Q13907 227 aa19.68■□□□□ 0.74
RFTN1-203ENST00000432519 KDM5AP29375 1690 aaKnown RBP19.67■□□□□ 0.74
RFTN1-203ENST00000432519 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
RFTN1-203ENST00000432519 TSPOAP1O95153 1857 aa19.66■□□□□ 0.74
RFTN1-203ENST00000432519 ADGRB1O14514 1584 aa19.66■□□□□ 0.74
RFTN1-203ENST00000432519 ERICH6BQ5W0A0 696 aa19.66■□□□□ 0.74
RFTN1-203ENST00000432519 ASXL1Q8IXJ9 1541 aa19.65■□□□□ 0.74
RFTN1-203ENST00000432519 PIK3C2BO00750 1634 aa19.64■□□□□ 0.74
RFTN1-203ENST00000432519 CENPJQ9HC77 1338 aaPredicted RBP19.64■□□□□ 0.74
RFTN1-203ENST00000432519 GLI2P10070 1586 aa19.64■□□□□ 0.74
RFTN1-203ENST00000432519 BLMP54132 1417 aaPredicted RBP19.64■□□□□ 0.73
RFTN1-203ENST00000432519 FBXO31Q5XUX0 539 aaPredicted RBP19.63■□□□□ 0.73
RFTN1-203ENST00000432519 DIP2BQ9P265 1576 aa19.63■□□□□ 0.73
RFTN1-203ENST00000432519 RBM19Q9Y4C8 960 aaKnown RBP19.62■□□□□ 0.73
RFTN1-203ENST00000432519 SETBP1Q9Y6X0 1596 aa19.62■□□□□ 0.73
RFTN1-203ENST00000432519 MYO3AQ8NEV4 1616 aa19.62■□□□□ 0.73
RFTN1-203ENST00000432519 NEXMIFQ5QGS0 1516 aa19.61■□□□□ 0.73
RFTN1-203ENST00000432519 ARHGAP31Q2M1Z3 1444 aa19.6■□□□□ 0.73
RFTN1-203ENST00000432519 SLC12A5Q9H2X9 1139 aa19.59■□□□□ 0.73
RFTN1-203ENST00000432519 RPGRIP1LQ68CZ1 1315 aa19.59■□□□□ 0.73
RFTN1-203ENST00000432519 MYO5BQ9ULV0 1848 aa19.59■□□□□ 0.73
RFTN1-203ENST00000432519 SBNO2Q9Y2G9 1366 aa19.59■□□□□ 0.73
RFTN1-203ENST00000432519 QRICH2Q9H0J4 1663 aa19.58■□□□□ 0.72
RFTN1-203ENST00000432519 SAFB2Q14151 953 aaKnown RBP eCLIP19.57■□□□□ 0.72
RFTN1-203ENST00000432519 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
RFTN1-203ENST00000432519 NPC1L1Q9UHC9 1359 aa19.56■□□□□ 0.72
RFTN1-203ENST00000432519 VGFO15240 615 aaPredicted RBP19.56■□□□□ 0.72
RFTN1-203ENST00000432519 RCAN3Q9UKA8 241 aa19.55■□□□□ 0.72
RFTN1-203ENST00000432519 PLEKHH1Q9ULM0 1364 aa19.55■□□□□ 0.72
RFTN1-203ENST00000432519 PREX1Q8TCU6 1659 aa19.54■□□□□ 0.72
RFTN1-203ENST00000432519 ZMYM4Q5VZL5 1548 aa19.54■□□□□ 0.72
RFTN1-203ENST00000432519 WDR43Q15061 677 aaKnown RBP eCLIP19.53■□□□□ 0.72
RFTN1-203ENST00000432519 CCDC146Q8IYE0 955 aa19.53■□□□□ 0.72
RFTN1-203ENST00000432519 STK26Q9P289 416 aa19.53■□□□□ 0.72
RFTN1-203ENST00000432519 RRP1P56182 461 aaKnown RBP19.53■□□□□ 0.72
RFTN1-203ENST00000432519 PDE3BQ13370 1112 aa19.52■□□□□ 0.72
RFTN1-203ENST00000432519 SLC52A1Q9NWF4 448 aa19.52■□□□□ 0.72
RFTN1-203ENST00000432519 INSRP06213 1382 aa19.52■□□□□ 0.71
RFTN1-203ENST00000432519 MLECQ14165 292 aa19.51■□□□□ 0.71
RFTN1-203ENST00000432519 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
RFTN1-203ENST00000432519 TMEM131LA2VDJ0 1609 aa19.51■□□□□ 0.71
RFTN1-203ENST00000432519 SLC24A1O60721 1099 aa19.51■□□□□ 0.71
RFTN1-203ENST00000432519 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
RFTN1-203ENST00000432519 ARHGEF28Q8N1W1 1705 aaKnown RBP19.51■□□□□ 0.71
RFTN1-203ENST00000432519 PLIN1O60240 522 aa19.5■□□□□ 0.71
RFTN1-203ENST00000432519 TULP4Q9NRJ4 1543 aa19.49■□□□□ 0.71
RFTN1-203ENST00000432519 EXOC6Q8TAG9 804 aa19.49■□□□□ 0.71
RFTN1-203ENST00000432519 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
RFTN1-203ENST00000432519 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
RFTN1-203ENST00000432519 ZNF521Q96K83 1311 aa19.46■□□□□ 0.71
RFTN1-203ENST00000432519 ZFYVE9O95405 1425 aa19.44■□□□□ 0.7
RFTN1-203ENST00000432519 APAF1O14727 1248 aa19.44■□□□□ 0.7
RFTN1-203ENST00000432519 SPINK5Q9NQ38 1064 aaPredicted RBP19.44■□□□□ 0.7
RFTN1-203ENST00000432519 CLTCQ00610 1675 aaKnown RBP19.43■□□□□ 0.7
RFTN1-203ENST00000432519 DUSP27Q5VZP5 1158 aa19.43■□□□□ 0.7
RFTN1-203ENST00000432519 EVC2Q86UK5 1308 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms