RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MYO5CQ9NQX4 1742 aa10.96□□□□□ -0.66
VTI1A-202ENST00000432306 NAIPQ13075 1403 aa10.96□□□□□ -0.66
VTI1A-202ENST00000432306 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
VTI1A-202ENST00000432306 PLCH2O75038 1416 aa10.95□□□□□ -0.66
VTI1A-202ENST00000432306 FMN1Q68DA7 1419 aa10.95□□□□□ -0.66
VTI1A-202ENST00000432306 RAD21O60216 631 aa10.95□□□□□ -0.66
VTI1A-202ENST00000432306 CEBPAP49715 358 aaPredicted RBP10.95□□□□□ -0.66
VTI1A-202ENST00000432306 CNTLNQ9NXG0 1405 aa10.95□□□□□ -0.66
VTI1A-202ENST00000432306 FAM50AQ14320 339 aaKnown RBP10.94□□□□□ -0.66
VTI1A-202ENST00000432306 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
VTI1A-202ENST00000432306 C3P01024 1663 aa10.93□□□□□ -0.66
VTI1A-202ENST00000432306 PTPRKQ15262 1439 aa10.93□□□□□ -0.66
VTI1A-202ENST00000432306 ZBED9Q6R2W3 1325 aa10.93□□□□□ -0.66
VTI1A-202ENST00000432306 LTBP4Q8N2S1 1624 aa10.93□□□□□ -0.66
VTI1A-202ENST00000432306 RGS22Q8NE09 1264 aa10.93□□□□□ -0.66
VTI1A-202ENST00000432306 HNRNPUQ00839 825 aaKnown RBP eCLIP10.92□□□□□ -0.66
VTI1A-202ENST00000432306 ZNF518AQ6AHZ1 1483 aa10.92□□□□□ -0.66
VTI1A-202ENST00000432306 NCOA1Q15788 1441 aa10.92□□□□□ -0.66
VTI1A-202ENST00000432306 EFCAB2Q5VUJ9 269 aa10.92□□□□□ -0.66
VTI1A-202ENST00000432306 WASHC2AQ641Q2 1341 aa10.91□□□□□ -0.66
VTI1A-202ENST00000432306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.91□□□□□ -0.66
VTI1A-202ENST00000432306 HS6ST3Q8IZP7 471 aa10.91□□□□□ -0.66
VTI1A-202ENST00000432306 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
VTI1A-202ENST00000432306 TCOF1Q13428 1488 aaKnown RBP10.91□□□□□ -0.66
VTI1A-202ENST00000432306 MYOM3Q5VTT5 1437 aa10.91□□□□□ -0.66
VTI1A-202ENST00000432306 RNF123Q5XPI4 1314 aa10.9□□□□□ -0.66
VTI1A-202ENST00000432306 ESF1Q9H501 851 aaKnown RBP10.9□□□□□ -0.66
VTI1A-202ENST00000432306 KDM5CP41229 1560 aa10.9□□□□□ -0.66
VTI1A-202ENST00000432306 RIOK3O14730 519 aaKnown RBP10.89□□□□□ -0.67
VTI1A-202ENST00000432306 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
VTI1A-202ENST00000432306 TRAPPC8Q9Y2L5 1435 aa10.89□□□□□ -0.67
VTI1A-202ENST00000432306 DIP2CQ9Y2E4 1556 aa10.88□□□□□ -0.67
VTI1A-202ENST00000432306 GCC2Q8IWJ2 1684 aa10.88□□□□□ -0.67
VTI1A-202ENST00000432306 CHRM1P11229 460 aaPredicted RBP10.88□□□□□ -0.67
VTI1A-202ENST00000432306 EHBP1L1Q8N3D4 1523 aa10.88□□□□□ -0.67
VTI1A-202ENST00000432306 AGLP35573 1532 aa10.87□□□□□ -0.67
VTI1A-202ENST00000432306 KIF14Q15058 1648 aa10.87□□□□□ -0.67
VTI1A-202ENST00000432306 DHX37Q8IY37 1157 aaKnown RBP10.87□□□□□ -0.67
VTI1A-202ENST00000432306 HIRIP3Q9BW71 556 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-202ENST00000432306 PRKRIP1Q9H875 184 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-202ENST00000432306 SMG6Q86US8 1419 aaKnown RBP10.86□□□□□ -0.67
VTI1A-202ENST00000432306 PYGBP11216 843 aa10.86□□□□□ -0.67
VTI1A-202ENST00000432306 NOP58Q9Y2X3 529 aaKnown RBP10.86□□□□□ -0.67
VTI1A-202ENST00000432306 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-202ENST00000432306 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
VTI1A-202ENST00000432306 ABCA6Q8N139 1617 aa10.86□□□□□ -0.67
VTI1A-202ENST00000432306 SPATA31E1Q6ZUB1 1445 aa10.85□□□□□ -0.67
VTI1A-202ENST00000432306 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
VTI1A-202ENST00000432306 DEKP35659 375 aaKnown RBP10.85□□□□□ -0.67
VTI1A-202ENST00000432306 EIF4G2P78344 907 aaKnown RBP eCLIP10.85□□□□□ -0.679e-10■■□□□ 13
VTI1A-202ENST00000432306 SUPT6HQ7KZ85 1726 aaKnown RBP10.85□□□□□ -0.67
VTI1A-202ENST00000432306 CCDC7Q96M83 1385 aa10.85□□□□□ -0.67
VTI1A-202ENST00000432306 MROH2AA6NES4 1674 aa10.85□□□□□ -0.67
VTI1A-202ENST00000432306 CAMSAP1Q5T5Y3 1602 aa10.84□□□□□ -0.67
VTI1A-202ENST00000432306 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
VTI1A-202ENST00000432306 UBAP1LF5GYI3 381 aa10.84□□□□□ -0.67
VTI1A-202ENST00000432306 APBB1O00213 710 aa10.84□□□□□ -0.67
VTI1A-202ENST00000432306 TAF7LQ5H9L4 462 aa10.84□□□□□ -0.67
VTI1A-202ENST00000432306 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
VTI1A-202ENST00000432306 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
VTI1A-202ENST00000432306 POLR1AO95602 1720 aaPredicted RBP10.83□□□□□ -0.68
VTI1A-202ENST00000432306 CDC42BPBQ9Y5S2 1711 aa10.83□□□□□ -0.68
VTI1A-202ENST00000432306 MTUS2Q5JR59 1369 aa10.82□□□□□ -0.68
VTI1A-202ENST00000432306 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
VTI1A-202ENST00000432306 MTMR7Q9Y216 660 aa10.82□□□□□ -0.68
VTI1A-202ENST00000432306 NPATQ14207 1427 aa10.82□□□□□ -0.68
VTI1A-202ENST00000432306 MIA2Q96PC5 1412 aa10.82□□□□□ -0.68
VTI1A-202ENST00000432306 ITSN2Q9NZM3 1697 aa10.81□□□□□ -0.68
VTI1A-202ENST00000432306 NKX1-1Q15270 411 aaPredicted RBP10.81□□□□□ -0.68
VTI1A-202ENST00000432306 VGFO15240 615 aaPredicted RBP10.81□□□□□ -0.68
VTI1A-202ENST00000432306 TROQ12816 1431 aaPredicted RBP10.81□□□□□ -0.68
VTI1A-202ENST00000432306 ATP1B4Q9UN42 357 aaPredicted RBP10.81□□□□□ -0.68
VTI1A-202ENST00000432306 RPRD2Q5VT52 1461 aaKnown RBP10.8□□□□□ -0.68
VTI1A-202ENST00000432306 ZNF142P52746 1687 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-202ENST00000432306 KIDINS220Q9ULH0 1771 aa10.8□□□□□ -0.68
VTI1A-202ENST00000432306 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-202ENST00000432306 RBM25P49756 843 aaKnown RBP10.79□□□□□ -0.68
VTI1A-202ENST00000432306 PDE4CQ08493 712 aa10.79□□□□□ -0.68
VTI1A-202ENST00000432306 POLR3GLQ9BT43 218 aa10.79□□□□□ -0.68
VTI1A-202ENST00000432306 TRAIPQ9BWF2 469 aa10.79□□□□□ -0.68
VTI1A-202ENST00000432306 ZNF335Q9H4Z2 1342 aaPredicted RBP10.79□□□□□ -0.68
VTI1A-202ENST00000432306 PREX2Q70Z35 1606 aa10.79□□□□□ -0.68
VTI1A-202ENST00000432306 PLA2R1Q13018 1463 aa10.78□□□□□ -0.68
VTI1A-202ENST00000432306 ABCC1P33527 1531 aa10.78□□□□□ -0.68
VTI1A-202ENST00000432306 MED1Q15648 1581 aaPredicted RBP10.78□□□□□ -0.68
VTI1A-202ENST00000432306 ROCK1Q13464 1354 aa10.78□□□□□ -0.68
VTI1A-202ENST00000432306 STK25O00506 426 aa10.78□□□□□ -0.68
VTI1A-202ENST00000432306 IRX6P78412 446 aaPredicted RBP10.78□□□□□ -0.68
VTI1A-202ENST00000432306 CCDC184Q52MB2 194 aa10.78□□□□□ -0.68
VTI1A-202ENST00000432306 IPO9Q96P70 1041 aaKnown RBP10.78□□□□□ -0.68
VTI1A-202ENST00000432306 MYO3AQ8NEV4 1616 aa10.78□□□□□ -0.68
VTI1A-202ENST00000432306 LRRIQ1Q96JM4 1722 aa10.77□□□□□ -0.68
VTI1A-202ENST00000432306 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-202ENST00000432306 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-202ENST00000432306 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.69
VTI1A-202ENST00000432306 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.69
VTI1A-202ENST00000432306 TMCO4Q5TGY1 634 aa10.76□□□□□ -0.69
VTI1A-202ENST00000432306 B4GALNT3Q6L9W6 998 aa10.76□□□□□ -0.69
VTI1A-202ENST00000432306 CHRDL2Q6WN34 429 aa10.76□□□□□ -0.69
VTI1A-202ENST00000432306 NUDCQ9Y266 331 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms