RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 DCAF11Q8TEB1 546 aa19.91■□□□□ 0.78
RIF1-204ENST00000430328 PAK3O75914 559 aaPredicted RBP19.91■□□□□ 0.78
RIF1-204ENST00000430328 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.91■□□□□ 0.78
RIF1-204ENST00000430328 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
RIF1-204ENST00000430328 REC8O95072 547 aa19.91■□□□□ 0.78
RIF1-204ENST00000430328 CCDC73Q6ZRK6 1079 aa19.91■□□□□ 0.78
RIF1-204ENST00000430328 SMARCE1Q969G3 411 aa19.9■□□□□ 0.78
RIF1-204ENST00000430328 CENPJQ9HC77 1338 aaPredicted RBP19.9■□□□□ 0.78
RIF1-204ENST00000430328 HMGN5P82970 282 aaKnown RBP19.89■□□□□ 0.78
RIF1-204ENST00000430328 RALBP1Q15311 655 aa19.89■□□□□ 0.78
RIF1-204ENST00000430328 NASPP49321 788 aaPredicted RBP19.89■□□□□ 0.77
RIF1-204ENST00000430328 TRDNQ13061 729 aa19.89■□□□□ 0.77
RIF1-204ENST00000430328 RABEP1Q15276 862 aa19.88■□□□□ 0.77
RIF1-204ENST00000430328 SAFBQ15424 915 aaKnown RBP eCLIP19.88■□□□□ 0.774e-7■□□□□ 10.5
RIF1-204ENST00000430328 CENPQQ7L2Z9 268 aaPredicted RBP19.88■□□□□ 0.77
RIF1-204ENST00000430328 ZCCHC6Q5VYS8 1495 aaKnown RBP19.88■□□□□ 0.77
RIF1-204ENST00000430328 DHX16O60231 1041 aaKnown RBP19.88■□□□□ 0.77
RIF1-204ENST00000430328 CENPHQ9H3R5 247 aa19.88■□□□□ 0.77
RIF1-204ENST00000430328 KANK1Q14678 1352 aa19.88■□□□□ 0.77
RIF1-204ENST00000430328 EIF3JO75822 258 aaKnown RBP19.87■□□□□ 0.77
RIF1-204ENST00000430328 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
RIF1-204ENST00000430328 SEPT11Q9NVA2 429 aaKnown RBP19.87■□□□□ 0.77
RIF1-204ENST00000430328 LMOD3Q0VAK6 560 aa19.87■□□□□ 0.77
RIF1-204ENST00000430328 CLUAP1Q96AJ1 413 aa19.87■□□□□ 0.77
RIF1-204ENST00000430328 ERICH2A1L162 156 aa19.86■□□□□ 0.77
RIF1-204ENST00000430328 CCAR1Q8IX12 1150 aaKnown RBP19.86■□□□□ 0.77
RIF1-204ENST00000430328 GBP2P32456 591 aaPredicted RBP19.86■□□□□ 0.77
RIF1-204ENST00000430328 NUCB2P80303 420 aa19.86■□□□□ 0.77
RIF1-204ENST00000430328 RNF20Q5VTR2 975 aa19.85■□□□□ 0.77
RIF1-204ENST00000430328 EIF3AQ14152 1382 aaKnown RBP19.85■□□□□ 0.77
RIF1-204ENST00000430328 SYCP1Q15431 976 aa19.85■□□□□ 0.77
RIF1-204ENST00000430328 BCCIPQ9P287 314 aaKnown RBP eCLIP19.85■□□□□ 0.77
RIF1-204ENST00000430328 CHMP5Q9NZZ3 219 aa19.85■□□□□ 0.77
RIF1-204ENST00000430328 DHX37Q8IY37 1157 aaKnown RBP19.85■□□□□ 0.77
RIF1-204ENST00000430328 CCDC9Q9Y3X0 531 aaKnown RBP19.85■□□□□ 0.77
RIF1-204ENST00000430328 SAFB2Q14151 953 aaKnown RBP eCLIP19.84■□□□□ 0.771e-6■■□□□ 11.8
RIF1-204ENST00000430328 ANO2Q9NQ90 1003 aa19.84■□□□□ 0.77
RIF1-204ENST00000430328 SLC4A3P48751 1232 aa19.83■□□□□ 0.76
RIF1-204ENST00000430328 NFXL1Q6ZNB6 911 aa19.83■□□□□ 0.76
RIF1-204ENST00000430328 TAX1BP1Q86VP1 789 aa19.82■□□□□ 0.76
RIF1-204ENST00000430328 SMC3Q9UQE7 1217 aa19.82■□□□□ 0.76
RIF1-204ENST00000430328 VPS37CA5D8V6 355 aaPredicted RBP19.82■□□□□ 0.76
RIF1-204ENST00000430328 FILIP1LQ4L180 1135 aa19.82■□□□□ 0.76
RIF1-204ENST00000430328 WWC2Q6AWC2 1192 aa19.81■□□□□ 0.76
RIF1-204ENST00000430328 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
RIF1-204ENST00000430328 GOLGA6L10A0A0M3HER8 536 aa19.81■□□□□ 0.76
RIF1-204ENST00000430328 LETM1O95202 739 aaPredicted RBP19.81■□□□□ 0.76
RIF1-204ENST00000430328 LUC7LQ9NQ29 371 aaKnown RBP19.81■□□□□ 0.76
RIF1-204ENST00000430328 PDE4AP27815 886 aa19.8■□□□□ 0.76
RIF1-204ENST00000430328 CWC22Q9HCG8 908 aaKnown RBP19.8■□□□□ 0.76
RIF1-204ENST00000430328 BRMS1Q9HCU9 246 aa19.8■□□□□ 0.76
RIF1-204ENST00000430328 MRE11P49959 708 aa19.8■□□□□ 0.76
RIF1-204ENST00000430328 TRIM5Q9C035 493 aa19.79■□□□□ 0.76
RIF1-204ENST00000430328 SDF4Q9BRK5 362 aa19.79■□□□□ 0.76
RIF1-204ENST00000430328 MAGEC2Q9UBF1 373 aaPredicted RBP19.79■□□□□ 0.76
RIF1-204ENST00000430328 ERLIN1O75477 346 aa19.78■□□□□ 0.76
RIF1-204ENST00000430328 PHLDB1Q86UU1 1377 aa19.78■□□□□ 0.76
RIF1-204ENST00000430328 SLC26A8Q96RN1 970 aa19.78■□□□□ 0.76
RIF1-204ENST00000430328 PPM1EQ8WY54 764 aa19.77■□□□□ 0.76
RIF1-204ENST00000430328 CEP63Q96MT8 703 aa19.77■□□□□ 0.76
RIF1-204ENST00000430328 SPATA24Q86W54 205 aa19.77■□□□□ 0.76
RIF1-204ENST00000430328 CCDC181Q5TID7 509 aa19.77■□□□□ 0.75
RIF1-204ENST00000430328 SMC2O95347 1197 aa19.77■□□□□ 0.75
RIF1-204ENST00000430328 ZNHIT6Q9NWK9 470 aaKnown RBP19.77■□□□□ 0.75
RIF1-204ENST00000430328 PDE3BQ13370 1112 aa19.76■□□□□ 0.75
RIF1-204ENST00000430328 DHX8Q14562 1220 aaKnown RBP19.76■□□□□ 0.75
RIF1-204ENST00000430328 TXLNBQ8N3L3 684 aa19.76■□□□□ 0.75
RIF1-204ENST00000430328 CCDC146Q8IYE0 955 aa19.76■□□□□ 0.75
RIF1-204ENST00000430328 CCDC97Q96F63 343 aaPredicted RBP19.76■□□□□ 0.75
RIF1-204ENST00000430328 RSPH4AQ5TD94 716 aa19.76■□□□□ 0.75
RIF1-204ENST00000430328 CCDC91Q7Z6B0 441 aa19.75■□□□□ 0.75
RIF1-204ENST00000430328 LRRCC1Q9C099 1032 aa19.75■□□□□ 0.75
RIF1-204ENST00000430328 XBP1P17861 261 aa19.75■□□□□ 0.75
RIF1-204ENST00000430328 RBM10P98175 930 aaKnown RBP19.75■□□□□ 0.75
RIF1-204ENST00000430328 IQCEQ6IPM2 695 aa19.74■□□□□ 0.75
RIF1-204ENST00000430328 MAPK8IP2Q13387 824 aaPredicted RBP19.74■□□□□ 0.75
RIF1-204ENST00000430328 VPS37DQ86XT2 251 aa19.74■□□□□ 0.75
RIF1-204ENST00000430328 STK26Q9P289 416 aa19.74■□□□□ 0.75
RIF1-204ENST00000430328 STAMBPO95630 424 aa19.73■□□□□ 0.75
RIF1-204ENST00000430328 CCDC112Q8NEF3 446 aa19.73■□□□□ 0.75
RIF1-204ENST00000430328 CFAP57Q96MR6 1250 aa19.71■□□□□ 0.75
RIF1-204ENST00000430328 RBM33Q96EV2 1170 aaKnown RBP19.71■□□□□ 0.75
RIF1-204ENST00000430328 CAVIN1Q6NZI2 390 aaKnown RBP19.71■□□□□ 0.75
RIF1-204ENST00000430328 TICAM2Q86XR7 235 aa19.71■□□□□ 0.75
RIF1-204ENST00000430328 KINO60870 393 aaKnown RBP19.71■□□□□ 0.75
RIF1-204ENST00000430328 TMEM132AQ24JP5 1023 aa19.7■□□□□ 0.74
RIF1-204ENST00000430328 DDX11Q96FC9 970 aa19.7■□□□□ 0.74
RIF1-204ENST00000430328 MAP2K1Q02750 393 aaPredicted RBP19.7■□□□□ 0.74
RIF1-204ENST00000430328 ROCK2O75116 1388 aaKnown RBP19.69■□□□□ 0.74
RIF1-204ENST00000430328 FOSBP53539 338 aa19.69■□□□□ 0.74
RIF1-204ENST00000430328 BRPF1P55201 1214 aaPredicted RBP19.69■□□□□ 0.74
RIF1-204ENST00000430328 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.69■□□□□ 0.74
RIF1-204ENST00000430328 PIP4K2AP48426 406 aaPredicted RBP19.69■□□□□ 0.74
RIF1-204ENST00000430328 ERICH4A6NGS2 130 aa19.69■□□□□ 0.74
RIF1-204ENST00000430328 ABCC9O60706 1549 aa19.68■□□□□ 0.74
RIF1-204ENST00000430328 KIF7Q2M1P5 1343 aa19.68■□□□□ 0.74
RIF1-204ENST00000430328 IFIT2P09913 472 aaKnown RBP19.68■□□□□ 0.74
RIF1-204ENST00000430328 TXLNAP40222 546 aa19.68■□□□□ 0.74
RIF1-204ENST00000430328 FAM193AP78312 1265 aa19.68■□□□□ 0.74
RIF1-204ENST00000430328 RRP9O43818 475 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms