RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 CHD2O14647 1828 aaKnown RBP14.01□□□□□ -0.17
NEDD1-203ENST00000429527 KIF1BO60333 1816 aa14□□□□□ -0.17
NEDD1-203ENST00000429527 ALKQ9UM73 1620 aa13.99□□□□□ -0.17
NEDD1-203ENST00000429527 NRXN3Q9Y4C0 1643 aa13.99□□□□□ -0.17
NEDD1-203ENST00000429527 MYT1Q01538 1121 aa13.99□□□□□ -0.17
NEDD1-203ENST00000429527 SETD1AO15047 1707 aaKnown RBP13.99□□□□□ -0.17
NEDD1-203ENST00000429527 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
NEDD1-203ENST00000429527 CFAP65Q6ZU64 1925 aaKnown RBP13.98□□□□□ -0.17
NEDD1-203ENST00000429527 NKTRP30414 1462 aaKnown RBP13.98□□□□□ -0.17
NEDD1-203ENST00000429527 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
NEDD1-203ENST00000429527 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
NEDD1-203ENST00000429527 NCKAP5LQ9HCH0 1330 aa13.96□□□□□ -0.17
NEDD1-203ENST00000429527 CHIC2Q9UKJ5 165 aa13.96□□□□□ -0.17
NEDD1-203ENST00000429527 PPLO60437 1756 aa13.96□□□□□ -0.17
NEDD1-203ENST00000429527 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.17
NEDD1-203ENST00000429527 XRN1Q8IZH2 1706 aaKnown RBP13.96□□□□□ -0.17
NEDD1-203ENST00000429527 NCOA3Q9Y6Q9 1424 aa13.95□□□□□ -0.18
NEDD1-203ENST00000429527 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
NEDD1-203ENST00000429527 LRRC7Q96NW7 1537 aa13.94□□□□□ -0.18
NEDD1-203ENST00000429527 NUP155O75694 1391 aa13.93□□□□□ -0.18
NEDD1-203ENST00000429527 IDI1Q13907 227 aa13.91□□□□□ -0.18
NEDD1-203ENST00000429527 RIMS2Q9UQ26 1411 aa13.91□□□□□ -0.18
NEDD1-203ENST00000429527 ILDR1Q86SU0 546 aaPredicted RBP13.89□□□□□ -0.19
NEDD1-203ENST00000429527 GTF3C3Q9Y5Q9 886 aa13.89□□□□□ -0.19
NEDD1-203ENST00000429527 KNDC1Q76NI1 1749 aa13.89□□□□□ -0.19
NEDD1-203ENST00000429527 ADAMTS13Q76LX8 1427 aa13.88□□□□□ -0.19
NEDD1-203ENST00000429527 SETD5Q9C0A6 1442 aa13.87□□□□□ -0.19
NEDD1-203ENST00000429527 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
NEDD1-203ENST00000429527 LTKP29376 864 aa13.86□□□□□ -0.19
NEDD1-203ENST00000429527 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
NEDD1-203ENST00000429527 LAMC1P11047 1609 aa13.86□□□□□ -0.19
NEDD1-203ENST00000429527 NRXN1Q9ULB1 1477 aa13.86□□□□□ -0.19
NEDD1-203ENST00000429527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
NEDD1-203ENST00000429527 ZNF335Q9H4Z2 1342 aaPredicted RBP13.85□□□□□ -0.19
NEDD1-203ENST00000429527 SPATA31E1Q6ZUB1 1445 aa13.85□□□□□ -0.19
NEDD1-203ENST00000429527 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
NEDD1-203ENST00000429527 EID1Q9Y6B2 187 aa13.84□□□□□ -0.19
NEDD1-203ENST00000429527 RPGRIP1LQ68CZ1 1315 aa13.84□□□□□ -0.19
NEDD1-203ENST00000429527 MYOM2P54296 1465 aa13.82□□□□□ -0.2
NEDD1-203ENST00000429527 TBX22Q9Y458 520 aa13.82□□□□□ -0.2
NEDD1-203ENST00000429527 TXNDC2Q86VQ3 553 aa13.81□□□□□ -0.2
NEDD1-203ENST00000429527 DCCP43146 1447 aa13.8□□□□□ -0.2
NEDD1-203ENST00000429527 KCNA6P17658 529 aa13.8□□□□□ -0.2
NEDD1-203ENST00000429527 MIER1Q8N108 512 aa13.8□□□□□ -0.2
NEDD1-203ENST00000429527 TIMELESSQ9UNS1 1208 aa13.79□□□□□ -0.2
NEDD1-203ENST00000429527 PTCH1Q13635 1447 aa13.78□□□□□ -0.2
NEDD1-203ENST00000429527 KIAA1210Q9ULL0 1709 aa13.77□□□□□ -0.2
NEDD1-203ENST00000429527 TECPR2O15040 1411 aa13.77□□□□□ -0.21
NEDD1-203ENST00000429527 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
NEDD1-203ENST00000429527 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
NEDD1-203ENST00000429527 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
NEDD1-203ENST00000429527 PTPRUQ92729 1446 aa13.75□□□□□ -0.21
NEDD1-203ENST00000429527 RAB3GAP2Q9H2M9 1393 aa13.75□□□□□ -0.21
NEDD1-203ENST00000429527 NALCNQ8IZF0 1738 aa13.74□□□□□ -0.21
NEDD1-203ENST00000429527 NHSL1Q5SYE7 1610 aa13.73□□□□□ -0.21
NEDD1-203ENST00000429527 ANKRD30BQ9BXX2 1392 aa13.73□□□□□ -0.21
NEDD1-203ENST00000429527 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
NEDD1-203ENST00000429527 ASXL1Q8IXJ9 1541 aa13.72□□□□□ -0.21
NEDD1-203ENST00000429527 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
NEDD1-203ENST00000429527 ROBO1Q9Y6N7 1651 aa13.71□□□□□ -0.21
NEDD1-203ENST00000429527 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.21
NEDD1-203ENST00000429527 CCDC144AA2RUR9 1427 aa13.71□□□□□ -0.21
NEDD1-203ENST00000429527 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.22
NEDD1-203ENST00000429527 ADGRB2O60241 1585 aa13.7□□□□□ -0.22
NEDD1-203ENST00000429527 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
NEDD1-203ENST00000429527 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
NEDD1-203ENST00000429527 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
NEDD1-203ENST00000429527 ITGAEP38570 1179 aa13.69□□□□□ -0.22
NEDD1-203ENST00000429527 COL16A1Q07092 1604 aaPredicted RBP13.68□□□□□ -0.22
NEDD1-203ENST00000429527 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
NEDD1-203ENST00000429527 TMEM94Q12767 1356 aa13.68□□□□□ -0.22
NEDD1-203ENST00000429527 TOM1O60784 492 aa13.67□□□□□ -0.22
NEDD1-203ENST00000429527 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
NEDD1-203ENST00000429527 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
NEDD1-203ENST00000429527 SIRT1Q96EB6 747 aa13.66□□□□□ -0.22
NEDD1-203ENST00000429527 FMN2Q9NZ56 1722 aa13.65□□□□□ -0.22
NEDD1-203ENST00000429527 VGFO15240 615 aaPredicted RBP13.65□□□□□ -0.22
NEDD1-203ENST00000429527 METP08581 1390 aa13.64□□□□□ -0.23
NEDD1-203ENST00000429527 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
NEDD1-203ENST00000429527 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-203ENST00000429527 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
NEDD1-203ENST00000429527 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
NEDD1-203ENST00000429527 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
NEDD1-203ENST00000429527 MSH6P52701 1360 aa13.62□□□□□ -0.23
NEDD1-203ENST00000429527 ABCC11Q96J66 1382 aa13.62□□□□□ -0.23
NEDD1-203ENST00000429527 MST1RQ04912 1400 aa13.61□□□□□ -0.23
NEDD1-203ENST00000429527 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
NEDD1-203ENST00000429527 TRIM52Q96A61 297 aa13.61□□□□□ -0.23
NEDD1-203ENST00000429527 PPP1R15AO75807 674 aaPredicted RBP13.59□□□□□ -0.23
NEDD1-203ENST00000429527 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
NEDD1-203ENST00000429527 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.23
NEDD1-203ENST00000429527 AMOTL2Q9Y2J4 779 aa13.56□□□□□ -0.24
NEDD1-203ENST00000429527 PROSER2Q86WR7 435 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-203ENST00000429527 C19orf44Q9H6X5 657 aa13.55□□□□□ -0.24
NEDD1-203ENST00000429527 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
NEDD1-203ENST00000429527 YTHDC2Q9H6S0 1430 aaKnown RBP13.55□□□□□ -0.24
NEDD1-203ENST00000429527 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
NEDD1-203ENST00000429527 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
NEDD1-203ENST00000429527 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
NEDD1-203ENST00000429527 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms