RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
CCDC144A-208ENST00000428950 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.15□□□□□ -1.1
CCDC144A-208ENST00000428950 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
CCDC144A-208ENST00000428950 LCE2BO14633 110 aa8.14□□□□□ -1.11
CCDC144A-208ENST00000428950 SLC24A1O60721 1099 aa8.14□□□□□ -1.11
CCDC144A-208ENST00000428950 ITGBL1O95965 494 aaPredicted RBP8.14□□□□□ -1.11
CCDC144A-208ENST00000428950 LMOD2Q6P5Q4 547 aa8.14□□□□□ -1.11
CCDC144A-208ENST00000428950 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
CCDC144A-208ENST00000428950 APLP1P51693 650 aa8.11□□□□□ -1.11
CCDC144A-208ENST00000428950 MAP2K5Q13163 448 aa8.11□□□□□ -1.11
CCDC144A-208ENST00000428950 TRAF7Q6Q0C0 670 aa8.09□□□□□ -1.11
CCDC144A-208ENST00000428950 KCNC4Q03721 635 aa8.08□□□□□ -1.12
CCDC144A-208ENST00000428950 PRR14Q9BWN1 585 aa8.08□□□□□ -1.12
CCDC144A-208ENST00000428950 TJAP1Q5JTD0 557 aa8.07□□□□□ -1.12
CCDC144A-208ENST00000428950 NLRP7Q8WX94 980 aa8.07□□□□□ -1.12
CCDC144A-208ENST00000428950 PHOX2BQ99453 314 aa8.07□□□□□ -1.12
CCDC144A-208ENST00000428950 MTRQ99707 1265 aa8.07□□□□□ -1.12
CCDC144A-208ENST00000428950 MINK1Q8N4C8 1332 aaPredicted RBP8.06□□□□□ -1.12
CCDC144A-208ENST00000428950 IRF6O14896 467 aa8.06□□□□□ -1.12
CCDC144A-208ENST00000428950 LAPTM4AQ15012 233 aa8.06□□□□□ -1.12
CCDC144A-208ENST00000428950 DAXXQ9UER7 740 aaPredicted RBP8.06□□□□□ -1.12
CCDC144A-208ENST00000428950 CFHP08603 1231 aa8.05□□□□□ -1.12
CCDC144A-208ENST00000428950 SLC10A3P09131 477 aa8.05□□□□□ -1.12
CCDC144A-208ENST00000428950 KMT5BQ4FZB7 885 aa8.05□□□□□ -1.12
CCDC144A-208ENST00000428950 CCDC102AQ96A19 550 aa8.05□□□□□ -1.12
CCDC144A-208ENST00000428950 IL21Q9HBE4 155 aa8.05□□□□□ -1.12
CCDC144A-208ENST00000428950 ZC3H15Q8WU90 426 aaKnown RBP8.03□□□□□ -1.12
CCDC144A-208ENST00000428950 PCDHB3Q9Y5E6 796 aa8.03□□□□□ -1.12
CCDC144A-208ENST00000428950 ACTN4O43707 911 aaKnown RBP8.02□□□□□ -1.13
CCDC144A-208ENST00000428950 COPS2P61201 443 aa8.02□□□□□ -1.13
CCDC144A-208ENST00000428950 RSPH4AQ5TD94 716 aa8.02□□□□□ -1.13
CCDC144A-208ENST00000428950 DDX11L8A8MPP1 907 aa8.01□□□□□ -1.13
CCDC144A-208ENST00000428950 ZMYND10O75800 440 aa8.01□□□□□ -1.13
CCDC144A-208ENST00000428950 BARGINQ6ZT62 677 aa8.01□□□□□ -1.13
CCDC144A-208ENST00000428950 SULF1Q8IWU6 871 aa8.01□□□□□ -1.13
CCDC144A-208ENST00000428950 RDH13Q8NBN7 331 aa8.01□□□□□ -1.13
CCDC144A-208ENST00000428950 BLOC1S3Q6QNY0 202 aa8□□□□□ -1.13
CCDC144A-208ENST00000428950 ZNF516Q92618 1163 aa8□□□□□ -1.13
CCDC144A-208ENST00000428950 MDM2Q00987 491 aaPredicted RBP7.98□□□□□ -1.13
CCDC144A-208ENST00000428950 KRI1Q8N9T8 703 aaKnown RBP7.98□□□□□ -1.13
CCDC144A-208ENST00000428950 ZNF775Q96BV0 537 aaPredicted RBP7.98□□□□□ -1.13
CCDC144A-208ENST00000428950 BCANQ96GW7 911 aa7.98□□□□□ -1.13
CCDC144A-208ENST00000428950 ZPR1O75312 459 aa7.97□□□□□ -1.13
CCDC144A-208ENST00000428950 ZNF787Q6DD87 383 aa7.97□□□□□ -1.13
CCDC144A-208ENST00000428950 GFRA3O60609 400 aa7.96□□□□□ -1.14
CCDC144A-208ENST00000428950 CLCN1P35523 988 aa7.95□□□□□ -1.14
CCDC144A-208ENST00000428950 GCGRP47871 477 aa7.95□□□□□ -1.14
CCDC144A-208ENST00000428950 NKX2-3Q8TAU0 364 aa7.95□□□□□ -1.14
CCDC144A-208ENST00000428950 GPCPD1Q9NPB8 672 aa7.95□□□□□ -1.14
CCDC144A-208ENST00000428950 TLL1O43897 1013 aa7.94□□□□□ -1.14
CCDC144A-208ENST00000428950 NR1I2O75469 434 aa7.94□□□□□ -1.14
CCDC144A-208ENST00000428950 CD46P15529 392 aa7.94□□□□□ -1.14
CCDC144A-208ENST00000428950 TMUB1Q9BVT8 246 aa7.94□□□□□ -1.14
CCDC144A-208ENST00000428950 FUT2Q10981 343 aa7.93□□□□□ -1.14
CCDC144A-208ENST00000428950 PUS10Q3MIT2 529 aaKnown RBP7.93□□□□□ -1.14
CCDC144A-208ENST00000428950 AMHR2Q16671 573 aa7.92□□□□□ -1.14
CCDC144A-208ENST00000428950 PPP1R18Q6NYC8 613 aa7.92□□□□□ -1.14
CCDC144A-208ENST00000428950 FAM217BQ9NTX9 383 aaPredicted RBP7.92□□□□□ -1.14
CCDC144A-208ENST00000428950 ATP6V1AP38606 617 aa7.91□□□□□ -1.14
CCDC144A-208ENST00000428950 MORN1Q5T089 497 aa7.91□□□□□ -1.14
CCDC144A-208ENST00000428950 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.91□□□□□ -1.14
CCDC144A-208ENST00000428950 LOC100996750A0A140TA64 210 aa7.9□□□□□ -1.14
CCDC144A-208ENST00000428950 ADH1BP00325 375 aa7.9□□□□□ -1.14
CCDC144A-208ENST00000428950 GGCXP38435 758 aa7.9□□□□□ -1.14
CCDC144A-208ENST00000428950 TTLL12Q14166 644 aaPredicted RBP7.9□□□□□ -1.14
CCDC144A-208ENST00000428950 REPIN1Q9BWE0 567 aaKnown RBP7.9□□□□□ -1.14
CCDC144A-208ENST00000428950 KRTAP4-6Q9BYQ5 205 aa7.9□□□□□ -1.14
CCDC144A-208ENST00000428950 SCUBE3Q8IX30 993 aa7.89□□□□□ -1.15
CCDC144A-208ENST00000428950 AK7Q96M32 723 aa7.89□□□□□ -1.15
CCDC144A-208ENST00000428950 TRIM66O15016 1216 aa7.88□□□□□ -1.15
CCDC144A-208ENST00000428950 KDM4AO75164 1064 aa7.88□□□□□ -1.15
CCDC144A-208ENST00000428950 GRIPAP1Q4V328 841 aa7.88□□□□□ -1.15
CCDC144A-208ENST00000428950 USP46P62068 366 aa7.87□□□□□ -1.15
CCDC144A-208ENST00000428950 SLC27A5Q9Y2P5 690 aa7.87□□□□□ -1.15
CCDC144A-208ENST00000428950 NRG2O14511 850 aaPredicted RBP7.86□□□□□ -1.15
CCDC144A-208ENST00000428950 S1PR4O95977 384 aa7.86□□□□□ -1.15
CCDC144A-208ENST00000428950 GIGYF2Q6Y7W6 1299 aaKnown RBP7.86□□□□□ -1.15
CCDC144A-208ENST00000428950 PARP9Q8IXQ6 854 aa7.86□□□□□ -1.15
CCDC144A-208ENST00000428950 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
CCDC144A-208ENST00000428950 SSTR3P32745 418 aaPredicted RBP7.85□□□□□ -1.15
CCDC144A-208ENST00000428950 THAP11Q96EK4 314 aa7.85□□□□□ -1.15
CCDC144A-208ENST00000428950 SPSB2Q99619 263 aa7.85□□□□□ -1.15
CCDC144A-208ENST00000428950 SLC6A16Q9GZN6 736 aa7.85□□□□□ -1.15
CCDC144A-208ENST00000428950 SLC24A3Q9HC58 644 aa7.85□□□□□ -1.15
CCDC144A-208ENST00000428950 HOXA2O43364 376 aa7.84□□□□□ -1.15
CCDC144A-208ENST00000428950 FMNL1O95466 1100 aaPredicted RBP7.84□□□□□ -1.15
CCDC144A-208ENST00000428950 PRKD2Q9BZL6 878 aa7.84□□□□□ -1.15
CCDC144A-208ENST00000428950 SALL2Q9Y467 1007 aaPredicted RBP7.84□□□□□ -1.15
CCDC144A-208ENST00000428950 Q3C1V9 767 aa7.83□□□□□ -1.16
CCDC144A-208ENST00000428950 BRICD5Q6PL45 260 aa7.83□□□□□ -1.16
CCDC144A-208ENST00000428950 NUTM1Q86Y26 1132 aa7.83□□□□□ -1.16
CCDC144A-208ENST00000428950 PDE4DQ08499 809 aa7.82□□□□□ -1.16
CCDC144A-208ENST00000428950 RNF19BQ6ZMZ0 732 aa7.82□□□□□ -1.16
CCDC144A-208ENST00000428950 ANKLE1Q8NAG6 615 aa7.82□□□□□ -1.16
CCDC144A-208ENST00000428950 HLA-CQ95604 372 aa7.82□□□□□ -1.16
CCDC144A-208ENST00000428950 V9GY48 417 aaPredicted RBP7.82□□□□□ -1.16
CCDC144A-208ENST00000428950 PPEF1O14829 653 aaPredicted RBP7.8□□□□□ -1.16
CCDC144A-208ENST00000428950 MSS51Q4VC12 460 aa7.8□□□□□ -1.16
CCDC144A-208ENST00000428950 FAM160A2Q8N612 972 aaPredicted RBP7.8□□□□□ -1.16
CCDC144A-208ENST00000428950 MS4A1P11836 297 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms