RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 PLA2R1Q13018 1463 aa10.02□□□□□ -0.81
CDC7-203ENST00000428239 TRPM2O94759 1503 aa10.02□□□□□ -0.81
CDC7-203ENST00000428239 SPHKAPQ2M3C7 1700 aa10.02□□□□□ -0.81
CDC7-203ENST00000428239 L3MBTL2Q969R5 705 aa10.02□□□□□ -0.81
CDC7-203ENST00000428239 PIK3C2BO00750 1634 aa10.02□□□□□ -0.81
CDC7-203ENST00000428239 SCAF1Q9H7N4 1312 aaKnown RBP10.01□□□□□ -0.81
CDC7-203ENST00000428239 SCAF11Q99590 1463 aaKnown RBP10.01□□□□□ -0.81
CDC7-203ENST00000428239 RPGRIP1LQ68CZ1 1315 aa10□□□□□ -0.81
CDC7-203ENST00000428239 NPHP4O75161 1426 aaPredicted RBP10□□□□□ -0.81
CDC7-203ENST00000428239 ADGRB3O60242 1522 aa10□□□□□ -0.81
CDC7-203ENST00000428239 RBM33Q96EV2 1170 aaKnown RBP10□□□□□ -0.81
CDC7-203ENST00000428239 CLTCL1P53675 1640 aa9.99□□□□□ -0.81
CDC7-203ENST00000428239 ADGRF5Q8IZF2 1346 aa9.99□□□□□ -0.81
CDC7-203ENST00000428239 SAFB2Q14151 953 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDC7-203ENST00000428239 TMEM132EQ6IEE7 984 aa9.99□□□□□ -0.81
CDC7-203ENST00000428239 CFAP70Q5T0N1 1121 aa9.98□□□□□ -0.81
CDC7-203ENST00000428239 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
CDC7-203ENST00000428239 ZNF335Q9H4Z2 1342 aaPredicted RBP9.98□□□□□ -0.81
CDC7-203ENST00000428239 POGKQ9P215 609 aa9.97□□□□□ -0.81
CDC7-203ENST00000428239 KIF1BO60333 1816 aa9.96□□□□□ -0.81
CDC7-203ENST00000428239 CLSPNQ9HAW4 1339 aa9.96□□□□□ -0.82
CDC7-203ENST00000428239 TRAK1Q9UPV9 953 aa9.95□□□□□ -0.82
CDC7-203ENST00000428239 AMOTL2Q9Y2J4 779 aa9.95□□□□□ -0.82
CDC7-203ENST00000428239 UBR1Q8IWV7 1749 aa9.95□□□□□ -0.82
CDC7-203ENST00000428239 PLEKHG1Q9ULL1 1385 aa9.94□□□□□ -0.82
CDC7-203ENST00000428239 TMEM131LA2VDJ0 1609 aa9.94□□□□□ -0.82
CDC7-203ENST00000428239 POLR3GLQ9BT43 218 aa9.94□□□□□ -0.82
CDC7-203ENST00000428239 CARD11Q9BXL7 1154 aa9.94□□□□□ -0.82
CDC7-203ENST00000428239 TBX22Q9Y458 520 aa9.94□□□□□ -0.82
CDC7-203ENST00000428239 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
CDC7-203ENST00000428239 KCNA6P17658 529 aa9.93□□□□□ -0.82
CDC7-203ENST00000428239 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
CDC7-203ENST00000428239 ROCK2O75116 1388 aaKnown RBP9.92□□□□□ -0.82
CDC7-203ENST00000428239 ZNF142P52746 1687 aaPredicted RBP9.92□□□□□ -0.82
CDC7-203ENST00000428239 NUTM2FA1L443 756 aa9.92□□□□□ -0.82
CDC7-203ENST00000428239 MYO5BQ9ULV0 1848 aa9.91□□□□□ -0.82
CDC7-203ENST00000428239 PIP4K2BP78356 416 aa9.91□□□□□ -0.82
CDC7-203ENST00000428239 ZFYVE9O95405 1425 aa9.91□□□□□ -0.82
CDC7-203ENST00000428239 SLIT1O75093 1534 aa9.91□□□□□ -0.82
CDC7-203ENST00000428239 ARHGAP23Q9P227 1491 aa9.91□□□□□ -0.82
CDC7-203ENST00000428239 NBPF1Q3BBV0 1214 aa9.9□□□□□ -0.82
CDC7-203ENST00000428239 UBAP1LF5GYI3 381 aa9.9□□□□□ -0.82
CDC7-203ENST00000428239 ATF3P18847 181 aa9.9□□□□□ -0.82
CDC7-203ENST00000428239 HIRIP3Q9BW71 556 aaPredicted RBP9.9□□□□□ -0.83
CDC7-203ENST00000428239 C14orf93Q9H972 538 aaKnown RBP9.89□□□□□ -0.83
CDC7-203ENST00000428239 METP08581 1390 aa9.89□□□□□ -0.83
CDC7-203ENST00000428239 WAPLQ7Z5K2 1190 aa9.89□□□□□ -0.83
CDC7-203ENST00000428239 PRAM1Q96QH2 718 aa9.89□□□□□ -0.83
CDC7-203ENST00000428239 NEXMIFQ5QGS0 1516 aa9.89□□□□□ -0.83
CDC7-203ENST00000428239 MINK1Q8N4C8 1332 aaPredicted RBP9.89□□□□□ -0.83
CDC7-203ENST00000428239 NBPF8Q3BBV2 869 aa9.88□□□□□ -0.83
CDC7-203ENST00000428239 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
CDC7-203ENST00000428239 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
CDC7-203ENST00000428239 CERKQ8TCT0 537 aa9.87□□□□□ -0.83
CDC7-203ENST00000428239 TMEM94Q12767 1356 aa9.87□□□□□ -0.83
CDC7-203ENST00000428239 ADAMTS13Q76LX8 1427 aa9.86□□□□□ -0.83
CDC7-203ENST00000428239 POLR1AO95602 1720 aaPredicted RBP9.86□□□□□ -0.83
CDC7-203ENST00000428239 MSH6P52701 1360 aa9.86□□□□□ -0.83
CDC7-203ENST00000428239 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
CDC7-203ENST00000428239 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
CDC7-203ENST00000428239 TOM1O60784 492 aa9.85□□□□□ -0.83
CDC7-203ENST00000428239 SRPK2P78362 688 aaKnown RBP9.85□□□□□ -0.83
CDC7-203ENST00000428239 MED14O60244 1454 aa9.85□□□□□ -0.83
CDC7-203ENST00000428239 PIK3C2GO75747 1445 aa9.85□□□□□ -0.83
CDC7-203ENST00000428239 PRAG1Q86YV5 1406 aa9.85□□□□□ -0.83
CDC7-203ENST00000428239 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
CDC7-203ENST00000428239 STRCQ7RTU9 1775 aa9.84□□□□□ -0.83
CDC7-203ENST00000428239 KDM5AP29375 1690 aaKnown RBP9.84□□□□□ -0.83
CDC7-203ENST00000428239 MYOM2P54296 1465 aa9.84□□□□□ -0.83
CDC7-203ENST00000428239 YTHDC2Q9H6S0 1430 aaKnown RBP9.84□□□□□ -0.83
CDC7-203ENST00000428239 EIF3AQ14152 1382 aaKnown RBP9.84□□□□□ -0.84
CDC7-203ENST00000428239 ALKQ9UM73 1620 aa9.83□□□□□ -0.84
CDC7-203ENST00000428239 PIK3R4Q99570 1358 aa9.83□□□□□ -0.84
CDC7-203ENST00000428239 CENPJQ9HC77 1338 aaPredicted RBP9.83□□□□□ -0.84
CDC7-203ENST00000428239 CADPS2Q86UW7 1296 aa9.83□□□□□ -0.84
CDC7-203ENST00000428239 C19orf44Q9H6X5 657 aa9.83□□□□□ -0.84
CDC7-203ENST00000428239 LRPPRCP42704 1394 aaKnown RBP9.82□□□□□ -0.84
CDC7-203ENST00000428239 EIF4G2P78344 907 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDC7-203ENST00000428239 LMOD2Q6P5Q4 547 aa9.82□□□□□ -0.84
CDC7-203ENST00000428239 PPLO60437 1756 aa9.82□□□□□ -0.84
CDC7-203ENST00000428239 TMC1Q8TDI8 760 aa9.82□□□□□ -0.84
CDC7-203ENST00000428239 ROBO2Q9HCK4 1378 aa9.81□□□□□ -0.84
CDC7-203ENST00000428239 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
CDC7-203ENST00000428239 ST20-MTHFSA0A0A6YYL1 179 aa9.81□□□□□ -0.84
CDC7-203ENST00000428239 PTPRUQ92729 1446 aa9.8□□□□□ -0.84
CDC7-203ENST00000428239 SETBP1Q9Y6X0 1596 aa9.8□□□□□ -0.84
CDC7-203ENST00000428239 PLEKHH1Q9ULM0 1364 aa9.8□□□□□ -0.84
CDC7-203ENST00000428239 ABCC11Q96J66 1382 aa9.79□□□□□ -0.84
CDC7-203ENST00000428239 DIP2AQ14689 1571 aa9.79□□□□□ -0.84
CDC7-203ENST00000428239 CNGB1Q14028 1251 aaPredicted RBP9.79□□□□□ -0.84
CDC7-203ENST00000428239 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
CDC7-203ENST00000428239 USP47Q96K76 1375 aa9.79□□□□□ -0.84
CDC7-203ENST00000428239 SLAIN2Q9P270 581 aa9.78□□□□□ -0.84
CDC7-203ENST00000428239 CPS1P31327 1500 aa9.78□□□□□ -0.84
CDC7-203ENST00000428239 EVC2Q86UK5 1308 aa9.78□□□□□ -0.84
CDC7-203ENST00000428239 PMFBP1Q8TBY8 1022 aa9.78□□□□□ -0.84
CDC7-203ENST00000428239 CABP2Q9NPB3 220 aa9.78□□□□□ -0.84
CDC7-203ENST00000428239 NKTRP30414 1462 aaKnown RBP9.77□□□□□ -0.85
CDC7-203ENST00000428239 PAK3O75914 559 aaPredicted RBP9.77□□□□□ -0.85
CDC7-203ENST00000428239 CDK19Q9BWU1 502 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms