RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 AEBP1Q8IUX7 1158 aa7.9□□□□□ -1.15
NUDCD1-202ENST00000427660 RSBN1LQ6PCB5 846 aaPredicted RBP7.89□□□□□ -1.15
NUDCD1-202ENST00000427660 CDCA7LQ96GN5 454 aa7.89□□□□□ -1.15
NUDCD1-202ENST00000427660 CALR3Q96L12 384 aaKnown RBP7.89□□□□□ -1.15
NUDCD1-202ENST00000427660 ZNF454Q8N9F8 522 aa7.88□□□□□ -1.15
NUDCD1-202ENST00000427660 ACIN1Q9UKV3 1341 aaKnown RBP7.88□□□□□ -1.15
NUDCD1-202ENST00000427660 NUTM1Q86Y26 1132 aa7.88□□□□□ -1.15
NUDCD1-202ENST00000427660 RCCD1A6NED2 376 aa7.87□□□□□ -1.15
NUDCD1-202ENST00000427660 EYA1Q99502 592 aa7.87□□□□□ -1.15
NUDCD1-202ENST00000427660 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.87□□□□□ -1.15
NUDCD1-202ENST00000427660 PATL2C9JE40 543 aaKnown RBP7.86□□□□□ -1.15
NUDCD1-202ENST00000427660 LILRB3O75022 631 aa7.86□□□□□ -1.15
NUDCD1-202ENST00000427660 ABL2P42684 1182 aa7.86□□□□□ -1.15
NUDCD1-202ENST00000427660 GLMNQ92990 594 aa7.86□□□□□ -1.15
NUDCD1-202ENST00000427660 ADAM33Q9BZ11 813 aa7.86□□□□□ -1.15
NUDCD1-202ENST00000427660 METRNQ9UJH8 293 aa7.85□□□□□ -1.15
NUDCD1-202ENST00000427660 PRPF38BQ5VTL8 546 aaKnown RBP7.85□□□□□ -1.15
NUDCD1-202ENST00000427660 IRF5Q13568 498 aa7.84□□□□□ -1.15
NUDCD1-202ENST00000427660 TMCO4Q5TGY1 634 aa7.84□□□□□ -1.15
NUDCD1-202ENST00000427660 MOXD2PA6NHM9 499 aa7.83□□□□□ -1.16
NUDCD1-202ENST00000427660 DNAJB2P25686 324 aa7.83□□□□□ -1.16
NUDCD1-202ENST00000427660 TBC1D2BQ9UPU7 963 aa7.83□□□□□ -1.16
NUDCD1-202ENST00000427660 AP1G2O75843 785 aa7.83□□□□□ -1.16
NUDCD1-202ENST00000427660 QPCTQ16769 361 aa7.83□□□□□ -1.16
NUDCD1-202ENST00000427660 ZNF710Q8N1W2 664 aa7.83□□□□□ -1.16
NUDCD1-202ENST00000427660 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
NUDCD1-202ENST00000427660 DDX11L8A8MPP1 907 aa7.82□□□□□ -1.16
NUDCD1-202ENST00000427660 USP17L8P0C7I0 530 aa7.82□□□□□ -1.16
NUDCD1-202ENST00000427660 PBXIP1Q96AQ6 731 aa7.82□□□□□ -1.16
NUDCD1-202ENST00000427660 FAM198AQ9UFP1 575 aa7.82□□□□□ -1.16
NUDCD1-202ENST00000427660 CSPP1Q1MSJ5 1256 aa7.81□□□□□ -1.16
NUDCD1-202ENST00000427660 WASHC4Q2M389 1173 aa7.81□□□□□ -1.16
NUDCD1-202ENST00000427660 TMEM134Q9H6X4 195 aa7.81□□□□□ -1.16
NUDCD1-202ENST00000427660 NDUFB9Q9Y6M9 179 aa7.81□□□□□ -1.16
NUDCD1-202ENST00000427660 NBPF26B4DH59 902 aa7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 RGS22Q8NE09 1264 aa7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 ZSWIM6Q9HCJ5 1215 aa7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 USTQ9Y2C2 406 aa7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 NUTM2BA6NNL0 878 aaPredicted RBP7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 NUTM2EB1AL46 878 aaPredicted RBP7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 USP46P62068 366 aa7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 RTL5Q5HYW3 569 aaPredicted RBP7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 NUTM2DQ5VT03 806 aaPredicted RBP7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 NUTM2AQ8IVF1 878 aaPredicted RBP7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
NUDCD1-202ENST00000427660 NUDT7P0C024 238 aa7.79□□□□□ -1.16
NUDCD1-202ENST00000427660 NDUFV2P19404 249 aa7.79□□□□□ -1.16
NUDCD1-202ENST00000427660 GJD4Q96KN9 370 aaPredicted RBP7.79□□□□□ -1.16
NUDCD1-202ENST00000427660 ZBTB3Q9H5J0 574 aa7.79□□□□□ -1.16
NUDCD1-202ENST00000427660 PCDHB15Q9Y5E8 787 aa7.79□□□□□ -1.16
NUDCD1-202ENST00000427660 PSDA5PKW4 1024 aaPredicted RBP7.79□□□□□ -1.16
NUDCD1-202ENST00000427660 DOK7Q18PE1 504 aa7.79□□□□□ -1.16
NUDCD1-202ENST00000427660 BCL2L12Q9HB09 334 aa7.79□□□□□ -1.16
NUDCD1-202ENST00000427660 PPP1R3GB7ZBB8 358 aa7.78□□□□□ -1.16
NUDCD1-202ENST00000427660 KDM4AO75164 1064 aa7.78□□□□□ -1.16
NUDCD1-202ENST00000427660 KCNA1Q09470 495 aa7.78□□□□□ -1.16
NUDCD1-202ENST00000427660 NUDT18Q6ZVK8 323 aa7.78□□□□□ -1.16
NUDCD1-202ENST00000427660 TSKSQ9UJT2 592 aa7.78□□□□□ -1.16
NUDCD1-202ENST00000427660 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
NUDCD1-202ENST00000427660 BRD1O95696 1058 aa7.77□□□□□ -1.17
NUDCD1-202ENST00000427660 COL9A1P20849 921 aa7.77□□□□□ -1.17
NUDCD1-202ENST00000427660 MFAP1P55081 439 aaKnown RBP7.77□□□□□ -1.17
NUDCD1-202ENST00000427660 PPP4R3BQ5MIZ7 849 aa7.77□□□□□ -1.17
NUDCD1-202ENST00000427660 HDGFL1Q5TGJ6 251 aa7.77□□□□□ -1.17
NUDCD1-202ENST00000427660 LHX8Q68G74 356 aa7.77□□□□□ -1.17
NUDCD1-202ENST00000427660 TATDN2Q93075 761 aa7.77□□□□□ -1.17
NUDCD1-202ENST00000427660 PACS2Q86VP3 889 aa7.76□□□□□ -1.17
NUDCD1-202ENST00000427660 ARSIQ5FYB1 569 aa7.75□□□□□ -1.17
NUDCD1-202ENST00000427660 RSPH4AQ5TD94 716 aa7.75□□□□□ -1.17
NUDCD1-202ENST00000427660 CABLES1Q8TDN4 633 aa7.75□□□□□ -1.17
NUDCD1-202ENST00000427660 PNMA3Q9UL41 463 aa7.75□□□□□ -1.17
NUDCD1-202ENST00000427660 TRIM6-TRIM34B2RNG4 842 aa7.75□□□□□ -1.17
NUDCD1-202ENST00000427660 RDH13Q8NBN7 331 aa7.75□□□□□ -1.17
NUDCD1-202ENST00000427660 HOXA2O43364 376 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 CSB-PGBD3P0DP91 1061 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 PTPREP23469 700 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 SRPK2P78362 688 aaKnown RBP7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 CFAP70Q5T0N1 1121 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 GPR153Q6NV75 609 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 ADAMTS19Q8TE59 1207 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 FDX1P10109 184 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 GCGRP47871 477 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 MTMR7Q9Y216 660 aa7.74□□□□□ -1.17
NUDCD1-202ENST00000427660 KHSRPQ92945 711 aaKnown RBP eCLIP7.73□□□□□ -1.174e-6■■■■□ 23.2
NUDCD1-202ENST00000427660 PPP1R12CQ9BZL4 782 aa7.73□□□□□ -1.17
NUDCD1-202ENST00000427660 C3orf80F5H4A9 247 aa7.72□□□□□ -1.17
NUDCD1-202ENST00000427660 HOXB3P14651 431 aaPredicted RBP7.72□□□□□ -1.17
NUDCD1-202ENST00000427660 HELBQ8NG08 1087 aaPredicted RBP7.72□□□□□ -1.17
NUDCD1-202ENST00000427660 TRIM34Q9BYJ4 488 aa7.72□□□□□ -1.17
NUDCD1-202ENST00000427660 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.72□□□□□ -1.17
NUDCD1-202ENST00000427660 GPR37L1O60883 481 aa7.72□□□□□ -1.17
NUDCD1-202ENST00000427660 SOX11P35716 441 aa7.72□□□□□ -1.17
NUDCD1-202ENST00000427660 LHX6Q9UPM6 363 aa7.71□□□□□ -1.17
NUDCD1-202ENST00000427660 CTDSPL2Q05D32 466 aa7.71□□□□□ -1.18
NUDCD1-202ENST00000427660 ALG2Q9H553 416 aa7.71□□□□□ -1.18
NUDCD1-202ENST00000427660 RFX1P22670 979 aa7.7□□□□□ -1.18
NUDCD1-202ENST00000427660 MTMR2Q13614 643 aa7.7□□□□□ -1.18
NUDCD1-202ENST00000427660 HMX1Q9NP08 348 aaPredicted RBP7.7□□□□□ -1.18
NUDCD1-202ENST00000427660 PCDHGC3Q9UN70 934 aa7.69□□□□□ -1.18
NUDCD1-202ENST00000427660 PALM3A6NDB9 673 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms