RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 DEPDC5O75140 1603 aa13□□□□□ -0.33
TPTE-201ENST00000427445 RGL3Q3MIN7 710 aa13□□□□□ -0.33
TPTE-201ENST00000427445 NBR1Q14596 966 aa13□□□□□ -0.33
TPTE-201ENST00000427445 CHD1O14646 1710 aa12.99□□□□□ -0.33
TPTE-201ENST00000427445 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
TPTE-201ENST00000427445 TET3O43151 1660 aa12.98□□□□□ -0.33
TPTE-201ENST00000427445 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
TPTE-201ENST00000427445 EFCAB2Q5VUJ9 269 aa12.98□□□□□ -0.33
TPTE-201ENST00000427445 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
TPTE-201ENST00000427445 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
TPTE-201ENST00000427445 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
TPTE-201ENST00000427445 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
TPTE-201ENST00000427445 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
TPTE-201ENST00000427445 KDM5AP29375 1690 aaKnown RBP12.96□□□□□ -0.33
TPTE-201ENST00000427445 CRBNQ96SW2 442 aa12.96□□□□□ -0.33
TPTE-201ENST00000427445 PPP2R1AP30153 589 aa12.96□□□□□ -0.34
TPTE-201ENST00000427445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.34
TPTE-201ENST00000427445 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
TPTE-201ENST00000427445 VWDEQ8N2E2 1590 aa12.95□□□□□ -0.34
TPTE-201ENST00000427445 MYOM1P52179 1685 aa12.95□□□□□ -0.34
TPTE-201ENST00000427445 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
TPTE-201ENST00000427445 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
TPTE-201ENST00000427445 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
TPTE-201ENST00000427445 MYOM2P54296 1465 aa12.94□□□□□ -0.34
TPTE-201ENST00000427445 ZFYVE16Q7Z3T8 1539 aa12.94□□□□□ -0.34
TPTE-201ENST00000427445 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
TPTE-201ENST00000427445 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
TPTE-201ENST00000427445 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
TPTE-201ENST00000427445 CLTCL1P53675 1640 aa12.92□□□□□ -0.34
TPTE-201ENST00000427445 KANK1Q14678 1352 aa12.92□□□□□ -0.34
TPTE-201ENST00000427445 TRMT2AQ8IZ69 625 aaKnown RBP12.92□□□□□ -0.34
TPTE-201ENST00000427445 PLEKHH1Q9ULM0 1364 aa12.91□□□□□ -0.34
TPTE-201ENST00000427445 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
TPTE-201ENST00000427445 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
TPTE-201ENST00000427445 NPM2Q86SE8 214 aaKnown RBP12.91□□□□□ -0.34
TPTE-201ENST00000427445 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
TPTE-201ENST00000427445 SLFN5Q08AF3 891 aa12.9□□□□□ -0.34
TPTE-201ENST00000427445 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
TPTE-201ENST00000427445 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.34
TPTE-201ENST00000427445 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
TPTE-201ENST00000427445 TRAPPC8Q9Y2L5 1435 aa12.9□□□□□ -0.35
TPTE-201ENST00000427445 AAMPQ13685 434 aa12.89□□□□□ -0.35
TPTE-201ENST00000427445 MAP3K4Q9Y6R4 1608 aa12.89□□□□□ -0.35
TPTE-201ENST00000427445 SENP3-EIF4A1A0A087X0R7 540 aa12.89□□□□□ -0.35
TPTE-201ENST00000427445 PLIN1O60240 522 aa12.89□□□□□ -0.35
TPTE-201ENST00000427445 NEFMP07197 916 aa12.89□□□□□ -0.35
TPTE-201ENST00000427445 E9PSI1 815 aa12.88□□□□□ -0.35
TPTE-201ENST00000427445 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
TPTE-201ENST00000427445 IFT172Q9UG01 1749 aa12.87□□□□□ -0.35
TPTE-201ENST00000427445 VIRMAQ69YN4 1812 aaKnown RBP12.87□□□□□ -0.35
TPTE-201ENST00000427445 ATP7AQ04656 1500 aa12.87□□□□□ -0.35
TPTE-201ENST00000427445 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
TPTE-201ENST00000427445 ABCA9Q8IUA7 1624 aa12.86□□□□□ -0.35
TPTE-201ENST00000427445 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
TPTE-201ENST00000427445 KIF1BO60333 1816 aa12.86□□□□□ -0.35
TPTE-201ENST00000427445 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
TPTE-201ENST00000427445 POLR3AO14802 1390 aaPredicted RBP12.86□□□□□ -0.35
TPTE-201ENST00000427445 NRXN1Q9ULB1 1477 aa12.86□□□□□ -0.35
TPTE-201ENST00000427445 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
TPTE-201ENST00000427445 CGNL1Q0VF96 1302 aa12.85□□□□□ -0.35
TPTE-201ENST00000427445 LMTK2Q8IWU2 1503 aa12.85□□□□□ -0.35
TPTE-201ENST00000427445 ABCA6Q8N139 1617 aa12.84□□□□□ -0.35
TPTE-201ENST00000427445 ERVK-7P63135 1459 aa12.84□□□□□ -0.35
TPTE-201ENST00000427445 USP32Q8NFA0 1604 aa12.83□□□□□ -0.35
TPTE-201ENST00000427445 ERCC6L2Q5T890 1561 aa12.83□□□□□ -0.35
TPTE-201ENST00000427445 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
TPTE-201ENST00000427445 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
TPTE-201ENST00000427445 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
TPTE-201ENST00000427445 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
TPTE-201ENST00000427445 FANCAO15360 1455 aa12.82□□□□□ -0.36
TPTE-201ENST00000427445 MROH1Q8NDA8 1641 aa12.81□□□□□ -0.36
TPTE-201ENST00000427445 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
TPTE-201ENST00000427445 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
TPTE-201ENST00000427445 ADGRB3O60242 1522 aa12.79□□□□□ -0.36
TPTE-201ENST00000427445 ZC3H13Q5T200 1668 aaKnown RBP12.78□□□□□ -0.36
TPTE-201ENST00000427445 APAF1O14727 1248 aa12.78□□□□□ -0.36
TPTE-201ENST00000427445 GSE1Q14687 1217 aa12.78□□□□□ -0.36
TPTE-201ENST00000427445 NFKBIBQ15653 356 aa12.78□□□□□ -0.36
TPTE-201ENST00000427445 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.37
TPTE-201ENST00000427445 SHPRHQ149N8 1683 aa12.76□□□□□ -0.37
TPTE-201ENST00000427445 ADGRL1O94910 1474 aa12.76□□□□□ -0.37
TPTE-201ENST00000427445 NSD2O96028 1365 aa12.76□□□□□ -0.37
TPTE-201ENST00000427445 IQSEC2Q5JU85 1478 aa12.75□□□□□ -0.37
TPTE-201ENST00000427445 CCDC27Q2M243 656 aa12.75□□□□□ -0.37
TPTE-201ENST00000427445 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
TPTE-201ENST00000427445 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
TPTE-201ENST00000427445 PPRC1Q5VV67 1664 aaKnown RBP12.74□□□□□ -0.37
TPTE-201ENST00000427445 AFAP1Q8N556 730 aa12.74□□□□□ -0.37
TPTE-201ENST00000427445 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
TPTE-201ENST00000427445 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
TPTE-201ENST00000427445 MROH2AA6NES4 1674 aa12.74□□□□□ -0.37
TPTE-201ENST00000427445 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
TPTE-201ENST00000427445 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
TPTE-201ENST00000427445 PPLO60437 1756 aa12.73□□□□□ -0.37
TPTE-201ENST00000427445 BECN1Q14457 450 aa12.73□□□□□ -0.37
TPTE-201ENST00000427445 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
TPTE-201ENST00000427445 KIF3BO15066 747 aa12.72□□□□□ -0.37
TPTE-201ENST00000427445 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
TPTE-201ENST00000427445 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
TPTE-201ENST00000427445 CCDC146Q8IYE0 955 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms