RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 CHGAP10645 457 aaKnown RBP24.29■■□□□ 1.48
CHEK1-202ENST00000427383 UBR1Q8IWV7 1749 aa24.29■■□□□ 1.48
CHEK1-202ENST00000427383 ROCK2O75116 1388 aaKnown RBP24.28■■□□□ 1.48
CHEK1-202ENST00000427383 PIK3C2GO75747 1445 aa24.28■■□□□ 1.48
CHEK1-202ENST00000427383 ZFYVE9O95405 1425 aa24.27■■□□□ 1.48
CHEK1-202ENST00000427383 NLRP1Q9C000 1473 aa24.27■■□□□ 1.48
CHEK1-202ENST00000427383 EIF4G2P78344 907 aaKnown RBP eCLIP24.27■■□□□ 1.48
CHEK1-202ENST00000427383 ADGRF5Q8IZF2 1346 aa24.26■■□□□ 1.47
CHEK1-202ENST00000427383 USP47Q96K76 1375 aa24.25■■□□□ 1.47
CHEK1-202ENST00000427383 HSPA5P11021 654 aaKnown RBP24.25■■□□□ 1.47
CHEK1-202ENST00000427383 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
CHEK1-202ENST00000427383 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
CHEK1-202ENST00000427383 MYO3AQ8NEV4 1616 aa24.24■■□□□ 1.47
CHEK1-202ENST00000427383 NBPF1Q3BBV0 1214 aa24.22■■□□□ 1.47
CHEK1-202ENST00000427383 CARD11Q9BXL7 1154 aa24.22■■□□□ 1.47
CHEK1-202ENST00000427383 SETBP1Q9Y6X0 1596 aa24.22■■□□□ 1.47
CHEK1-202ENST00000427383 POLR1AO95602 1720 aaPredicted RBP24.22■■□□□ 1.47
CHEK1-202ENST00000427383 HIRIP3Q9BW71 556 aaPredicted RBP24.21■■□□□ 1.47
CHEK1-202ENST00000427383 ADGRB1O14514 1584 aa24.17■■□□□ 1.46
CHEK1-202ENST00000427383 VGFO15240 615 aaPredicted RBP24.17■■□□□ 1.46
CHEK1-202ENST00000427383 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
CHEK1-202ENST00000427383 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
CHEK1-202ENST00000427383 STAG3Q9UJ98 1225 aa24.15■■□□□ 1.46
CHEK1-202ENST00000427383 CEP170BQ9Y4F5 1589 aaPredicted RBP24.13■■□□□ 1.45
CHEK1-202ENST00000427383 CFAP70Q5T0N1 1121 aa24.13■■□□□ 1.45
CHEK1-202ENST00000427383 SCAF11Q99590 1463 aaKnown RBP24.13■■□□□ 1.45
CHEK1-202ENST00000427383 PTPRMP28827 1452 aa24.12■■□□□ 1.45
CHEK1-202ENST00000427383 C14orf93Q9H972 538 aaKnown RBP24.11■■□□□ 1.45
CHEK1-202ENST00000427383 SETD1AO15047 1707 aaKnown RBP24.11■■□□□ 1.45
CHEK1-202ENST00000427383 TMEM2Q9UHN6 1383 aa24.11■■□□□ 1.45
CHEK1-202ENST00000427383 NRXN3Q9Y4C0 1643 aa24.11■■□□□ 1.45
CHEK1-202ENST00000427383 SLIT1O75093 1534 aa24.11■■□□□ 1.45
CHEK1-202ENST00000427383 ASXL1Q8IXJ9 1541 aa24.11■■□□□ 1.45
CHEK1-202ENST00000427383 NUTM2DQ5VT03 806 aaPredicted RBP24.1■■□□□ 1.45
CHEK1-202ENST00000427383 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
CHEK1-202ENST00000427383 ARHGAP23Q9P227 1491 aa24.1■■□□□ 1.45
CHEK1-202ENST00000427383 SETD1BQ9UPS6 1966 aaKnown RBP24.09■■□□□ 1.45
CHEK1-202ENST00000427383 WASHC2AQ641Q2 1341 aa24.07■■□□□ 1.44
CHEK1-202ENST00000427383 ALKQ9UM73 1620 aa24.07■■□□□ 1.44
CHEK1-202ENST00000427383 ST20-MTHFSA0A0A6YYL1 179 aa24.06■■□□□ 1.44
CHEK1-202ENST00000427383 C11orf95C9JLR9 678 aaPredicted RBP24.05■■□□□ 1.44
CHEK1-202ENST00000427383 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
CHEK1-202ENST00000427383 CCDC7Q96M83 1385 aa24.03■■□□□ 1.44
CHEK1-202ENST00000427383 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
CHEK1-202ENST00000427383 ARHGEF28Q8N1W1 1705 aaKnown RBP24.02■■□□□ 1.44
CHEK1-202ENST00000427383 TESK2Q96S53 571 aa24.01■■□□□ 1.43
CHEK1-202ENST00000427383 EIF3AQ14152 1382 aaKnown RBP24.01■■□□□ 1.43
CHEK1-202ENST00000427383 KIF7Q2M1P5 1343 aa24■■□□□ 1.43
CHEK1-202ENST00000427383 HDGFP51858 240 aaKnown RBP23.97■■□□□ 1.43
CHEK1-202ENST00000427383 PLEKHG1Q9ULL1 1385 aa23.96■■□□□ 1.43
CHEK1-202ENST00000427383 THEMISQ8N1K5 641 aaPredicted RBP23.96■■□□□ 1.43
CHEK1-202ENST00000427383 TMEM132EQ6IEE7 984 aa23.95■■□□□ 1.43
CHEK1-202ENST00000427383 QRICH2Q9H0J4 1663 aa23.95■■□□□ 1.43
CHEK1-202ENST00000427383 LTKP29376 864 aa23.95■■□□□ 1.42
CHEK1-202ENST00000427383 SBNO2Q9Y2G9 1366 aa23.94■■□□□ 1.42
CHEK1-202ENST00000427383 DDX10Q13206 875 aaKnown RBP23.94■■□□□ 1.42
CHEK1-202ENST00000427383 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
CHEK1-202ENST00000427383 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
CHEK1-202ENST00000427383 MED14O60244 1454 aa23.92■■□□□ 1.42
CHEK1-202ENST00000427383 DISP3Q9P2K9 1392 aa23.92■■□□□ 1.42
CHEK1-202ENST00000427383 KNDC1Q76NI1 1749 aa23.92■■□□□ 1.42
CHEK1-202ENST00000427383 DLC1Q96QB1 1528 aa23.9■■□□□ 1.42
CHEK1-202ENST00000427383 DIP2AQ14689 1571 aa23.9■■□□□ 1.42
CHEK1-202ENST00000427383 KDM4FA0A1W2PPD8 638 aa23.89■■□□□ 1.41
CHEK1-202ENST00000427383 TXNDC2Q86VQ3 553 aa23.89■■□□□ 1.41
CHEK1-202ENST00000427383 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
CHEK1-202ENST00000427383 EID1Q9Y6B2 187 aa23.89■■□□□ 1.41
CHEK1-202ENST00000427383 TRAK1Q9UPV9 953 aa23.88■■□□□ 1.41
CHEK1-202ENST00000427383 METP08581 1390 aa23.87■■□□□ 1.41
CHEK1-202ENST00000427383 CENPJQ9HC77 1338 aaPredicted RBP23.86■■□□□ 1.41
CHEK1-202ENST00000427383 LRPPRCP42704 1394 aaKnown RBP23.86■■□□□ 1.41
CHEK1-202ENST00000427383 TECPR2O15040 1411 aa23.84■■□□□ 1.41
CHEK1-202ENST00000427383 TMF1P82094 1093 aa23.84■■□□□ 1.41
CHEK1-202ENST00000427383 CPS1P31327 1500 aa23.84■■□□□ 1.41
CHEK1-202ENST00000427383 ABCC11Q96J66 1382 aa23.83■■□□□ 1.41
CHEK1-202ENST00000427383 MYOM1P52179 1685 aa23.83■■□□□ 1.4
CHEK1-202ENST00000427383 SLC24A1O60721 1099 aa23.81■■□□□ 1.4
CHEK1-202ENST00000427383 TULP4Q9NRJ4 1543 aa23.8■■□□□ 1.4
CHEK1-202ENST00000427383 STK26Q9P289 416 aa23.78■■□□□ 1.4
CHEK1-202ENST00000427383 MIER1Q8N108 512 aa23.77■■□□□ 1.4
CHEK1-202ENST00000427383 XRN1Q8IZH2 1706 aaKnown RBP23.77■■□□□ 1.4
CHEK1-202ENST00000427383 TBX22Q9Y458 520 aa23.76■■□□□ 1.39
CHEK1-202ENST00000427383 FAM135BQ49AJ0 1406 aa23.76■■□□□ 1.39
CHEK1-202ENST00000427383 ANKLE2Q86XL3 938 aa23.76■■□□□ 1.39
CHEK1-202ENST00000427383 PTPRUQ92729 1446 aa23.76■■□□□ 1.39
CHEK1-202ENST00000427383 CDCA8Q53HL2 280 aa23.74■■□□□ 1.39
CHEK1-202ENST00000427383 BCANQ96GW7 911 aa23.74■■□□□ 1.39
CHEK1-202ENST00000427383 PRAM1Q96QH2 718 aa23.73■■□□□ 1.39
CHEK1-202ENST00000427383 SLC26A8Q96RN1 970 aa23.73■■□□□ 1.39
CHEK1-202ENST00000427383 POLR3GLQ9BT43 218 aa23.73■■□□□ 1.39
CHEK1-202ENST00000427383 LMTK3Q96Q04 1460 aa23.72■■□□□ 1.39
CHEK1-202ENST00000427383 PIK3R4Q99570 1358 aa23.72■■□□□ 1.39
CHEK1-202ENST00000427383 SIRT1Q96EB6 747 aa23.71■■□□□ 1.39
CHEK1-202ENST00000427383 PLEKHH1Q9ULM0 1364 aa23.71■■□□□ 1.39
CHEK1-202ENST00000427383 PTCH1Q13635 1447 aa23.71■■□□□ 1.39
CHEK1-202ENST00000427383 NPHP4O75161 1426 aaPredicted RBP23.7■■□□□ 1.38
CHEK1-202ENST00000427383 CHD2O14647 1828 aaKnown RBP23.7■■□□□ 1.38
CHEK1-202ENST00000427383 ROBO2Q9HCK4 1378 aa23.69■■□□□ 1.38
CHEK1-202ENST00000427383 ADGRB2O60241 1585 aa23.67■■□□□ 1.38
CHEK1-202ENST00000427383 PUS7Q96PZ0 661 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms