RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 UBE2Q2Q8WVN8 375 aa13.04□□□□□ -0.32
CTCFL-206ENST00000426658 BLMP54132 1417 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-206ENST00000426658 PLB1Q6P1J6 1458 aa13.03□□□□□ -0.32
CTCFL-206ENST00000426658 RSPH4AQ5TD94 716 aa13.03□□□□□ -0.32
CTCFL-206ENST00000426658 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
CTCFL-206ENST00000426658 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
CTCFL-206ENST00000426658 FAM69CQ0P6D2 419 aa13.03□□□□□ -0.32
CTCFL-206ENST00000426658 PMFBP1Q8TBY8 1022 aa13.03□□□□□ -0.32
CTCFL-206ENST00000426658 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
CTCFL-206ENST00000426658 RAPGEF6Q8TEU7 1601 aa13.02□□□□□ -0.32
CTCFL-206ENST00000426658 KIF3BO15066 747 aa13.02□□□□□ -0.32
CTCFL-206ENST00000426658 PANK1Q8TE04 598 aa13.02□□□□□ -0.32
CTCFL-206ENST00000426658 TESK2Q96S53 571 aa13.02□□□□□ -0.32
CTCFL-206ENST00000426658 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
CTCFL-206ENST00000426658 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
CTCFL-206ENST00000426658 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-206ENST00000426658 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTCFL-206ENST00000426658 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
CTCFL-206ENST00000426658 INSRP06213 1382 aa13.01□□□□□ -0.33
CTCFL-206ENST00000426658 ZMYM4Q5VZL5 1548 aa13.01□□□□□ -0.33
CTCFL-206ENST00000426658 IGHDP01880 384 aa13□□□□□ -0.33
CTCFL-206ENST00000426658 STK26Q9P289 416 aa13□□□□□ -0.33
CTCFL-206ENST00000426658 ITSN2Q9NZM3 1697 aa13□□□□□ -0.33
CTCFL-206ENST00000426658 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
CTCFL-206ENST00000426658 RWDD1Q9H446 243 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-206ENST00000426658 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
CTCFL-206ENST00000426658 ADAMTS12P58397 1594 aa12.99□□□□□ -0.33
CTCFL-206ENST00000426658 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
CTCFL-206ENST00000426658 COL17A1Q9UMD9 1497 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-206ENST00000426658 TRIM44Q96DX7 344 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-206ENST00000426658 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
CTCFL-206ENST00000426658 EFCAB2Q5VUJ9 269 aa12.97□□□□□ -0.33
CTCFL-206ENST00000426658 ADGBQ8N7X0 1667 aa12.97□□□□□ -0.33
CTCFL-206ENST00000426658 PTPRGP23470 1445 aa12.97□□□□□ -0.33
CTCFL-206ENST00000426658 SOX12O15370 315 aa12.97□□□□□ -0.33
CTCFL-206ENST00000426658 NKTRP30414 1462 aaKnown RBP12.96□□□□□ -0.33
CTCFL-206ENST00000426658 HSCBQ8IWL3 235 aa12.96□□□□□ -0.33
CTCFL-206ENST00000426658 NGEFQ8N5V2 710 aa12.96□□□□□ -0.34
CTCFL-206ENST00000426658 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
CTCFL-206ENST00000426658 SEC24BO95487 1268 aa12.95□□□□□ -0.34
CTCFL-206ENST00000426658 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
CTCFL-206ENST00000426658 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
CTCFL-206ENST00000426658 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
CTCFL-206ENST00000426658 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
CTCFL-206ENST00000426658 SRPK2P78362 688 aaKnown RBP12.94□□□□□ -0.34
CTCFL-206ENST00000426658 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
CTCFL-206ENST00000426658 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
CTCFL-206ENST00000426658 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
CTCFL-206ENST00000426658 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
CTCFL-206ENST00000426658 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-206ENST00000426658 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
CTCFL-206ENST00000426658 TPRNQ4KMQ1 711 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 ANP32BQ92688 251 aaKnown RBP12.93□□□□□ -0.34
CTCFL-206ENST00000426658 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 MYH16Q9H6N6 1097 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 GPRASP1Q5JY77 1395 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 TARBP1Q13395 1621 aaKnown RBP12.93□□□□□ -0.34
CTCFL-206ENST00000426658 SMC4Q9NTJ3 1288 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 CHMP5Q9NZZ3 219 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 FAM135AQ9P2D6 1515 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
CTCFL-206ENST00000426658 GRIN2AQ12879 1464 aa12.92□□□□□ -0.34
CTCFL-206ENST00000426658 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
CTCFL-206ENST00000426658 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
CTCFL-206ENST00000426658 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
CTCFL-206ENST00000426658 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
CTCFL-206ENST00000426658 NINLQ9Y2I6 1382 aa12.91□□□□□ -0.34
CTCFL-206ENST00000426658 MCM4P33991 863 aa12.91□□□□□ -0.34
CTCFL-206ENST00000426658 RRAGDQ9NQL2 400 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-206ENST00000426658 A2MP01023 1474 aa12.91□□□□□ -0.34
CTCFL-206ENST00000426658 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
CTCFL-206ENST00000426658 APBB1O00213 710 aa12.9□□□□□ -0.34
CTCFL-206ENST00000426658 TRAK2O60296 914 aa12.9□□□□□ -0.34
CTCFL-206ENST00000426658 HSP90AB1P08238 724 aaKnown RBP12.9□□□□□ -0.34
CTCFL-206ENST00000426658 HSP90AA2PQ14568 343 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-206ENST00000426658 AAMPQ13685 434 aa12.9□□□□□ -0.34
CTCFL-206ENST00000426658 C22orf23Q9BZE7 217 aa12.9□□□□□ -0.34
CTCFL-206ENST00000426658 CEP170Q5SW79 1584 aa12.9□□□□□ -0.34
CTCFL-206ENST00000426658 TMEM132EQ6IEE7 984 aa12.89□□□□□ -0.35
CTCFL-206ENST00000426658 WWC1Q8IX03 1113 aa12.89□□□□□ -0.35
CTCFL-206ENST00000426658 KANK1Q14678 1352 aa12.89□□□□□ -0.35
CTCFL-206ENST00000426658 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
CTCFL-206ENST00000426658 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-206ENST00000426658 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
CTCFL-206ENST00000426658 MRE11P49959 708 aa12.88□□□□□ -0.35
CTCFL-206ENST00000426658 XRCC6P12956 609 aaKnown RBP eCLIP12.88□□□□□ -0.35
CTCFL-206ENST00000426658 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
CTCFL-206ENST00000426658 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
CTCFL-206ENST00000426658 KDM5DQ9BY66 1539 aa12.87□□□□□ -0.35
CTCFL-206ENST00000426658 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
CTCFL-206ENST00000426658 AEBP2Q6ZN18 517 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-206ENST00000426658 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
CTCFL-206ENST00000426658 GBP4Q96PP9 640 aa12.86□□□□□ -0.35
CTCFL-206ENST00000426658 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
CTCFL-206ENST00000426658 USP19O94966 1318 aa12.86□□□□□ -0.35
CTCFL-206ENST00000426658 NUP160Q12769 1436 aa12.86□□□□□ -0.35
CTCFL-206ENST00000426658 GOLGA6L22H0YM25 854 aa12.86□□□□□ -0.35
CTCFL-206ENST00000426658 RARSP54136 660 aaKnown RBP12.86□□□□□ -0.35
CTCFL-206ENST00000426658 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms