RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TMEM131LA2VDJ0 1609 aa21.21■□□□□ 0.99
GINS3-203ENST00000426538 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
GINS3-203ENST00000426538 GPRASP1Q5JY77 1395 aa21.2■□□□□ 0.98
GINS3-203ENST00000426538 PPLO60437 1756 aa21.19■□□□□ 0.98
GINS3-203ENST00000426538 C3P01024 1663 aa21.17■□□□□ 0.98
GINS3-203ENST00000426538 NUTM2DQ5VT03 806 aaPredicted RBP21.17■□□□□ 0.98
GINS3-203ENST00000426538 NRXN1Q9ULB1 1477 aa21.17■□□□□ 0.98
GINS3-203ENST00000426538 CFAP70Q5T0N1 1121 aa21.16■□□□□ 0.98
GINS3-203ENST00000426538 MYO5BQ9ULV0 1848 aa21.16■□□□□ 0.98
GINS3-203ENST00000426538 NEXMIFQ5QGS0 1516 aa21.16■□□□□ 0.98
GINS3-203ENST00000426538 KIAA1210Q9ULL0 1709 aa21.14■□□□□ 0.98
GINS3-203ENST00000426538 A2ML1A8K2U0 1454 aa21.14■□□□□ 0.97
GINS3-203ENST00000426538 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
GINS3-203ENST00000426538 LAMC1P11047 1609 aa21.14■□□□□ 0.97
GINS3-203ENST00000426538 ZFYVE9O95405 1425 aa21.14■□□□□ 0.97
GINS3-203ENST00000426538 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
GINS3-203ENST00000426538 PIK3C2GO75747 1445 aa21.13■□□□□ 0.97
GINS3-203ENST00000426538 C14orf93Q9H972 538 aaKnown RBP21.12■□□□□ 0.97
GINS3-203ENST00000426538 NLRP1Q9C000 1473 aa21.12■□□□□ 0.97
GINS3-203ENST00000426538 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
GINS3-203ENST00000426538 ADAMTSL3P82987 1691 aa21.11■□□□□ 0.97
GINS3-203ENST00000426538 RIMS1Q86UR5 1692 aaKnown RBP21.11■□□□□ 0.97
GINS3-203ENST00000426538 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
GINS3-203ENST00000426538 RIMS2Q9UQ26 1411 aa21.08■□□□□ 0.97
GINS3-203ENST00000426538 WASHC2AQ641Q2 1341 aa21.08■□□□□ 0.97
GINS3-203ENST00000426538 KDM5AP29375 1690 aaKnown RBP21.08■□□□□ 0.96
GINS3-203ENST00000426538 SCAF11Q99590 1463 aaKnown RBP21.06■□□□□ 0.96
GINS3-203ENST00000426538 C11orf95C9JLR9 678 aaPredicted RBP21.06■□□□□ 0.96
GINS3-203ENST00000426538 EIF3AQ14152 1382 aaKnown RBP21.05■□□□□ 0.96
GINS3-203ENST00000426538 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
GINS3-203ENST00000426538 UBR1Q8IWV7 1749 aa21.04■□□□□ 0.96
GINS3-203ENST00000426538 SETBP1Q9Y6X0 1596 aa21.04■□□□□ 0.96
GINS3-203ENST00000426538 THEMISQ8N1K5 641 aaPredicted RBP21.04■□□□□ 0.96
GINS3-203ENST00000426538 TMEM132EQ6IEE7 984 aa21.03■□□□□ 0.96
GINS3-203ENST00000426538 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
GINS3-203ENST00000426538 TMEM2Q9UHN6 1383 aa21.03■□□□□ 0.96
GINS3-203ENST00000426538 KIF7Q2M1P5 1343 aa21.02■□□□□ 0.96
GINS3-203ENST00000426538 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
GINS3-203ENST00000426538 POLR3GLQ9BT43 218 aa21.01■□□□□ 0.95
GINS3-203ENST00000426538 EID1Q9Y6B2 187 aa21■□□□□ 0.95
GINS3-203ENST00000426538 POLR1AO95602 1720 aaPredicted RBP20.99■□□□□ 0.95
GINS3-203ENST00000426538 SLC24A1O60721 1099 aa20.99■□□□□ 0.95
GINS3-203ENST00000426538 TMF1P82094 1093 aa20.98■□□□□ 0.95
GINS3-203ENST00000426538 BCANQ96GW7 911 aa20.98■□□□□ 0.95
GINS3-203ENST00000426538 TESK2Q96S53 571 aa20.98■□□□□ 0.95
GINS3-203ENST00000426538 TRAK1Q9UPV9 953 aa20.98■□□□□ 0.95
GINS3-203ENST00000426538 MYO3AQ8NEV4 1616 aa20.98■□□□□ 0.95
GINS3-203ENST00000426538 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
GINS3-203ENST00000426538 TXNDC2Q86VQ3 553 aa20.97■□□□□ 0.95
GINS3-203ENST00000426538 SETD1BQ9UPS6 1966 aaKnown RBP20.96■□□□□ 0.95
GINS3-203ENST00000426538 PTPRMP28827 1452 aa20.96■□□□□ 0.95
GINS3-203ENST00000426538 ALKQ9UM73 1620 aa20.95■□□□□ 0.94
GINS3-203ENST00000426538 MIER1Q8N108 512 aa20.95■□□□□ 0.94
GINS3-203ENST00000426538 LTKP29376 864 aa20.93■□□□□ 0.94
GINS3-203ENST00000426538 CEP170BQ9Y4F5 1589 aaPredicted RBP20.93■□□□□ 0.94
GINS3-203ENST00000426538 STK26Q9P289 416 aa20.92■□□□□ 0.94
GINS3-203ENST00000426538 CENPJQ9HC77 1338 aaPredicted RBP20.92■□□□□ 0.94
GINS3-203ENST00000426538 SLIT1O75093 1534 aa20.92■□□□□ 0.94
GINS3-203ENST00000426538 CDCA8Q53HL2 280 aa20.92■□□□□ 0.94
GINS3-203ENST00000426538 ARHGAP23Q9P227 1491 aa20.91■□□□□ 0.94
GINS3-203ENST00000426538 PLEKHG1Q9ULL1 1385 aa20.9■□□□□ 0.94
GINS3-203ENST00000426538 YTHDC2Q9H6S0 1430 aaKnown RBP20.89■□□□□ 0.93
GINS3-203ENST00000426538 DISP3Q9P2K9 1392 aa20.89■□□□□ 0.93
GINS3-203ENST00000426538 ANP32CO43423 234 aa20.88■□□□□ 0.93
GINS3-203ENST00000426538 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
GINS3-203ENST00000426538 SBNO2Q9Y2G9 1366 aa20.86■□□□□ 0.93
GINS3-203ENST00000426538 NRXN3Q9Y4C0 1643 aa20.85■□□□□ 0.93
GINS3-203ENST00000426538 ANKLE2Q86XL3 938 aa20.85■□□□□ 0.93
GINS3-203ENST00000426538 POGKQ9P215 609 aa20.85■□□□□ 0.93
GINS3-203ENST00000426538 ZNF142P52746 1687 aaPredicted RBP20.85■□□□□ 0.93
GINS3-203ENST00000426538 LRPPRCP42704 1394 aaKnown RBP20.83■□□□□ 0.92
GINS3-203ENST00000426538 ARHGEF28Q8N1W1 1705 aaKnown RBP20.83■□□□□ 0.92
GINS3-203ENST00000426538 METP08581 1390 aa20.82■□□□□ 0.92
GINS3-203ENST00000426538 SETD1AO15047 1707 aaKnown RBP20.82■□□□□ 0.92
GINS3-203ENST00000426538 ABCC11Q96J66 1382 aa20.81■□□□□ 0.92
GINS3-203ENST00000426538 SAFB2Q14151 953 aaKnown RBP eCLIP20.81■□□□□ 0.92
GINS3-203ENST00000426538 PRAM1Q96QH2 718 aa20.81■□□□□ 0.92
GINS3-203ENST00000426538 SLC26A8Q96RN1 970 aa20.81■□□□□ 0.92
GINS3-203ENST00000426538 ADAMTS13Q76LX8 1427 aa20.81■□□□□ 0.92
GINS3-203ENST00000426538 QRICH2Q9H0J4 1663 aa20.81■□□□□ 0.92
GINS3-203ENST00000426538 TBX22Q9Y458 520 aa20.8■□□□□ 0.92
GINS3-203ENST00000426538 KDM4FA0A1W2PPD8 638 aa20.79■□□□□ 0.92
GINS3-203ENST00000426538 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
GINS3-203ENST00000426538 DLC1Q96QB1 1528 aa20.77■□□□□ 0.92
GINS3-203ENST00000426538 SIRT1Q96EB6 747 aa20.76■□□□□ 0.91
GINS3-203ENST00000426538 MED14O60244 1454 aa20.76■□□□□ 0.91
GINS3-203ENST00000426538 WAPLQ7Z5K2 1190 aa20.75■□□□□ 0.91
GINS3-203ENST00000426538 PANK3Q9H999 370 aa20.74■□□□□ 0.91
GINS3-203ENST00000426538 MINK1Q8N4C8 1332 aaPredicted RBP20.74■□□□□ 0.91
GINS3-203ENST00000426538 DIP2AQ14689 1571 aa20.73■□□□□ 0.91
GINS3-203ENST00000426538 PUS7Q96PZ0 661 aaKnown RBP20.73■□□□□ 0.91
GINS3-203ENST00000426538 TECPR2O15040 1411 aa20.71■□□□□ 0.91
GINS3-203ENST00000426538 FAM135BQ49AJ0 1406 aa20.71■□□□□ 0.91
GINS3-203ENST00000426538 AMOTL2Q9Y2J4 779 aa20.71■□□□□ 0.91
GINS3-203ENST00000426538 PRKRIP1Q9H875 184 aaPredicted RBP20.7■□□□□ 0.9
GINS3-203ENST00000426538 SRPK2P78362 688 aaKnown RBP20.7■□□□□ 0.9
GINS3-203ENST00000426538 KNDC1Q76NI1 1749 aa20.69■□□□□ 0.9
GINS3-203ENST00000426538 PIK3R4Q99570 1358 aa20.68■□□□□ 0.9
GINS3-203ENST00000426538 PLEKHH1Q9ULM0 1364 aa20.68■□□□□ 0.9
GINS3-203ENST00000426538 CCER2I3L3R5 266 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms