RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 KDM4FA0A1W2PPD8 638 aa22.42■■□□□ 1.18
SCRN1-205ENST00000425819 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
SCRN1-205ENST00000425819 RALGAPBQ86X10 1494 aa22.41■■□□□ 1.18
SCRN1-205ENST00000425819 VGFO15240 615 aaPredicted RBP22.4■■□□□ 1.18
SCRN1-205ENST00000425819 UBR1Q8IWV7 1749 aa22.39■■□□□ 1.17
SCRN1-205ENST00000425819 RIMS2Q9UQ26 1411 aa22.39■■□□□ 1.17
SCRN1-205ENST00000425819 NRXN1Q9ULB1 1477 aa22.38■■□□□ 1.17
SCRN1-205ENST00000425819 ROCK2O75116 1388 aaKnown RBP22.38■■□□□ 1.17
SCRN1-205ENST00000425819 TRPM1Q7Z4N2 1603 aa22.37■■□□□ 1.17
SCRN1-205ENST00000425819 KDM5AP29375 1690 aaKnown RBP22.37■■□□□ 1.17
SCRN1-205ENST00000425819 NBPF1Q3BBV0 1214 aa22.37■■□□□ 1.17
SCRN1-205ENST00000425819 SENP3Q9H4L4 574 aaPredicted RBP22.36■■□□□ 1.17
SCRN1-205ENST00000425819 ZFYVE9O95405 1425 aa22.35■■□□□ 1.17
SCRN1-205ENST00000425819 TMEM2Q9UHN6 1383 aa22.35■■□□□ 1.17
SCRN1-205ENST00000425819 CEP170BQ9Y4F5 1589 aaPredicted RBP22.35■■□□□ 1.17
SCRN1-205ENST00000425819 PIK3C2GO75747 1445 aa22.35■■□□□ 1.17
SCRN1-205ENST00000425819 CFAP70Q5T0N1 1121 aa22.34■■□□□ 1.17
SCRN1-205ENST00000425819 CARD11Q9BXL7 1154 aa22.34■■□□□ 1.17
SCRN1-205ENST00000425819 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.16
SCRN1-205ENST00000425819 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.16
SCRN1-205ENST00000425819 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.33■■□□□ 1.16
SCRN1-205ENST00000425819 HIRIP3Q9BW71 556 aaPredicted RBP22.32■■□□□ 1.16
SCRN1-205ENST00000425819 HDGFP51858 240 aaKnown RBP22.31■■□□□ 1.16
SCRN1-205ENST00000425819 EIF4G2P78344 907 aaKnown RBP eCLIP22.31■■□□□ 1.16
SCRN1-205ENST00000425819 HSPA5P11021 654 aaKnown RBP22.3■■□□□ 1.16
SCRN1-205ENST00000425819 GPRASP1Q5JY77 1395 aa22.3■■□□□ 1.16
SCRN1-205ENST00000425819 C14orf93Q9H972 538 aaKnown RBP22.29■■□□□ 1.16
SCRN1-205ENST00000425819 SETD1BQ9UPS6 1966 aaKnown RBP22.28■■□□□ 1.16
SCRN1-205ENST00000425819 ZNF142P52746 1687 aaPredicted RBP22.28■■□□□ 1.16
SCRN1-205ENST00000425819 USP47Q96K76 1375 aa22.28■■□□□ 1.16
SCRN1-205ENST00000425819 LTKP29376 864 aa22.27■■□□□ 1.16
SCRN1-205ENST00000425819 TXNDC2Q86VQ3 553 aa22.27■■□□□ 1.16
SCRN1-205ENST00000425819 SLIT1O75093 1534 aa22.27■■□□□ 1.16
SCRN1-205ENST00000425819 ARHGAP23Q9P227 1491 aa22.27■■□□□ 1.16
SCRN1-205ENST00000425819 KIAA1210Q9ULL0 1709 aa22.26■■□□□ 1.15
SCRN1-205ENST00000425819 EID1Q9Y6B2 187 aa22.26■■□□□ 1.15
SCRN1-205ENST00000425819 LAMC1P11047 1609 aa22.23■■□□□ 1.15
SCRN1-205ENST00000425819 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
SCRN1-205ENST00000425819 BCANQ96GW7 911 aa22.23■■□□□ 1.15
SCRN1-205ENST00000425819 ALKQ9UM73 1620 aa22.2■■□□□ 1.14
SCRN1-205ENST00000425819 PLEKHG1Q9ULL1 1385 aa22.2■■□□□ 1.14
SCRN1-205ENST00000425819 SCAF11Q99590 1463 aaKnown RBP22.2■■□□□ 1.14
SCRN1-205ENST00000425819 ADGRB1O14514 1584 aa22.2■■□□□ 1.14
SCRN1-205ENST00000425819 SETBP1Q9Y6X0 1596 aa22.2■■□□□ 1.14
SCRN1-205ENST00000425819 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
SCRN1-205ENST00000425819 ANKLE2Q86XL3 938 aa22.17■■□□□ 1.14
SCRN1-205ENST00000425819 NRXN3Q9Y4C0 1643 aa22.17■■□□□ 1.14
SCRN1-205ENST00000425819 ASXL1Q8IXJ9 1541 aa22.16■■□□□ 1.14
SCRN1-205ENST00000425819 IQGAP1P46940 1657 aa22.16■■□□□ 1.14
SCRN1-205ENST00000425819 TRAK1Q9UPV9 953 aa22.15■■□□□ 1.14
SCRN1-205ENST00000425819 ADAMTS13Q76LX8 1427 aa22.13■■□□□ 1.13
SCRN1-205ENST00000425819 STK26Q9P289 416 aa22.13■■□□□ 1.13
SCRN1-205ENST00000425819 SLC26A8Q96RN1 970 aa22.12■■□□□ 1.13
SCRN1-205ENST00000425819 EIF3AQ14152 1382 aaKnown RBP22.12■■□□□ 1.13
SCRN1-205ENST00000425819 METP08581 1390 aa22.11■■□□□ 1.13
SCRN1-205ENST00000425819 SETD1AO15047 1707 aaKnown RBP22.11■■□□□ 1.13
SCRN1-205ENST00000425819 HSPA2P54652 639 aa22.1■■□□□ 1.13
SCRN1-205ENST00000425819 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
SCRN1-205ENST00000425819 NCKAP5LQ9HCH0 1330 aa22.09■■□□□ 1.13
SCRN1-205ENST00000425819 MED14O60244 1454 aa22.08■■□□□ 1.13
SCRN1-205ENST00000425819 LMTK3Q96Q04 1460 aa22.08■■□□□ 1.13
SCRN1-205ENST00000425819 C11orf95C9JLR9 678 aaPredicted RBP22.08■■□□□ 1.13
SCRN1-205ENST00000425819 TESK2Q96S53 571 aa22.07■■□□□ 1.12
SCRN1-205ENST00000425819 TBX22Q9Y458 520 aa22.07■■□□□ 1.12
SCRN1-205ENST00000425819 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
SCRN1-205ENST00000425819 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
SCRN1-205ENST00000425819 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
SCRN1-205ENST00000425819 CENPJQ9HC77 1338 aaPredicted RBP22.05■■□□□ 1.12
SCRN1-205ENST00000425819 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
SCRN1-205ENST00000425819 KIF7Q2M1P5 1343 aa22.02■■□□□ 1.12
SCRN1-205ENST00000425819 POLR1AO95602 1720 aaPredicted RBP22.02■■□□□ 1.12
SCRN1-205ENST00000425819 ABCC11Q96J66 1382 aa22.02■■□□□ 1.12
SCRN1-205ENST00000425819 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
SCRN1-205ENST00000425819 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
SCRN1-205ENST00000425819 PRAM1Q96QH2 718 aa22.01■■□□□ 1.11
SCRN1-205ENST00000425819 POLR3GLQ9BT43 218 aa22.01■■□□□ 1.11
SCRN1-205ENST00000425819 SAFB2Q14151 953 aaKnown RBP eCLIP22■■□□□ 1.11
SCRN1-205ENST00000425819 PTPRUQ92729 1446 aa22■■□□□ 1.11
SCRN1-205ENST00000425819 TMF1P82094 1093 aa21.99■■□□□ 1.11
SCRN1-205ENST00000425819 POGKQ9P215 609 aa21.99■■□□□ 1.11
SCRN1-205ENST00000425819 DISP3Q9P2K9 1392 aa21.99■■□□□ 1.11
SCRN1-205ENST00000425819 DLC1Q96QB1 1528 aa21.98■■□□□ 1.11
SCRN1-205ENST00000425819 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
SCRN1-205ENST00000425819 WAPLQ7Z5K2 1190 aa21.97■■□□□ 1.11
SCRN1-205ENST00000425819 AMOTL2Q9Y2J4 779 aa21.97■■□□□ 1.11
SCRN1-205ENST00000425819 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
SCRN1-205ENST00000425819 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
SCRN1-205ENST00000425819 TECPR2O15040 1411 aa21.96■■□□□ 1.11
SCRN1-205ENST00000425819 PLEKHH1Q9ULM0 1364 aa21.96■■□□□ 1.11
SCRN1-205ENST00000425819 SBNO2Q9Y2G9 1366 aa21.96■■□□□ 1.11
SCRN1-205ENST00000425819 PIK3R4Q99570 1358 aa21.95■■□□□ 1.1
SCRN1-205ENST00000425819 ROBO2Q9HCK4 1378 aa21.94■■□□□ 1.1
SCRN1-205ENST00000425819 CPS1P31327 1500 aa21.94■■□□□ 1.1
SCRN1-205ENST00000425819 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
SCRN1-205ENST00000425819 SIRT1Q96EB6 747 aa21.93■■□□□ 1.1
SCRN1-205ENST00000425819 SLC24A1O60721 1099 aa21.92■■□□□ 1.1
SCRN1-205ENST00000425819 MINK1Q8N4C8 1332 aaPredicted RBP21.92■■□□□ 1.1
SCRN1-205ENST00000425819 FAM135BQ49AJ0 1406 aa21.92■■□□□ 1.1
SCRN1-205ENST00000425819 KCNA6P17658 529 aa21.91■■□□□ 1.1
SCRN1-205ENST00000425819 CDCA8Q53HL2 280 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms