RNA–Protein interactions for RNA: ENST00000425401.1

TFEB-213, Transcript of transcription factor EB, human

TSL 1 (best)

Gene TFEB, Length 281 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFEB-213	ENST00000425401	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.32	■■■□□ 2.92
TFEB-213	ENST00000425401	GCC2	Q8IWJ2	1684 aa		33.32	■■■□□ 2.92
TFEB-213	ENST00000425401	RBM33	Q96EV2	1170 aa	Known RBP	33.31	■■■□□ 2.92
TFEB-213	ENST00000425401	RIMS2	Q9UQ26	1411 aa		33.29	■■■□□ 2.92
TFEB-213	ENST00000425401	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.29	■■■□□ 2.92
TFEB-213	ENST00000425401	TMEM94	Q12767	1356 aa		33.25	■■■□□ 2.91
TFEB-213	ENST00000425401		E9PCH4	1651 aa		33.25	■■■□□ 2.91
TFEB-213	ENST00000425401	IQGAP3	Q86VI3	1631 aa		33.24	■■■□□ 2.91
TFEB-213	ENST00000425401	MYO5B	Q9ULV0	1848 aa		33.21	■■■□□ 2.91
TFEB-213	ENST00000425401	PLEKHG1	Q9ULL1	1385 aa		33.21	■■■□□ 2.91
TFEB-213	ENST00000425401	ZNF326	Q5BKZ1	582 aa	Known RBP	33.2	■■■□□ 2.91
TFEB-213	ENST00000425401	TRIM52	Q96A61	297 aa		33.2	■■■□□ 2.91
TFEB-213	ENST00000425401	TMEM131L	A2VDJ0	1609 aa		33.2	■■■□□ 2.9
TFEB-213	ENST00000425401	ALK	Q9UM73	1620 aa		33.2	■■■□□ 2.9
TFEB-213	ENST00000425401	ZFYVE9	O95405	1425 aa		33.19	■■■□□ 2.9
TFEB-213	ENST00000425401	PHF23	Q9BUL5	403 aa	Predicted RBP	33.18	■■■□□ 2.9
TFEB-213	ENST00000425401	C14orf37	Q86TY3	774 aa		33.17	■■■□□ 2.9
TFEB-213	ENST00000425401	RRBP1	Q9P2E9	1410 aa	Known RBP	33.17	■■■□□ 2.9
TFEB-213	ENST00000425401	SOCS7	O14512	581 aa		33.14	■■■□□ 2.9
TFEB-213	ENST00000425401	TBX22	Q9Y458	520 aa		33.14	■■■□□ 2.9
TFEB-213	ENST00000425401	MSH6	P52701	1360 aa		33.11	■■■□□ 2.89
TFEB-213	ENST00000425401	XIRP1	Q702N8	1843 aa	Known RBP	33.11	■■■□□ 2.89
TFEB-213	ENST00000425401	NKTR	P30414	1462 aa	Known RBP	33.07	■■■□□ 2.88
TFEB-213	ENST00000425401	MED1	Q15648	1581 aa	Predicted RBP	33.07	■■■□□ 2.88
TFEB-213	ENST00000425401	NAIP	Q13075	1403 aa		33.06	■■■□□ 2.88
TFEB-213	ENST00000425401	SLAIN2	Q9P270	581 aa		33.02	■■■□□ 2.88
TFEB-213	ENST00000425401	FAM135B	Q49AJ0	1406 aa		33.02	■■■□□ 2.88
TFEB-213	ENST00000425401	NWD1	Q149M9	1564 aa		33	■■■□□ 2.87
TFEB-213	ENST00000425401	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33	■■■□□ 2.87
TFEB-213	ENST00000425401	SPHKAP	Q2M3C7	1700 aa		32.99	■■■□□ 2.87
TFEB-213	ENST00000425401	AMOTL2	Q9Y2J4	779 aa		32.99	■■■□□ 2.87
TFEB-213	ENST00000425401	CHD2	O14647	1828 aa	Known RBP	32.98	■■■□□ 2.87
TFEB-213	ENST00000425401	ADAMTS13	Q76LX8	1427 aa		32.97	■■■□□ 2.87
TFEB-213	ENST00000425401	ATF3	P18847	181 aa		32.95	■■■□□ 2.87
TFEB-213	ENST00000425401	HFM1	A2PYH4	1435 aa		32.93	■■■□□ 2.86
TFEB-213	ENST00000425401	PIK3R4	Q99570	1358 aa		32.92	■■■□□ 2.86
TFEB-213	ENST00000425401	DIP2A	Q14689	1571 aa		32.92	■■■□□ 2.86
TFEB-213	ENST00000425401	ROBO1	Q9Y6N7	1651 aa		32.91	■■■□□ 2.86
TFEB-213	ENST00000425401	C19orf44	Q9H6X5	657 aa		32.9	■■■□□ 2.86
TFEB-213	ENST00000425401	TRPM2	O94759	1503 aa		32.9	■■■□□ 2.86
TFEB-213	ENST00000425401	CADPS2	Q86UW7	1296 aa		32.89	■■■□□ 2.86
TFEB-213	ENST00000425401	CLTCL1	P53675	1640 aa		32.85	■■■□□ 2.85
TFEB-213	ENST00000425401	NCOA3	Q9Y6Q9	1424 aa		32.85	■■■□□ 2.85
TFEB-213	ENST00000425401	FOXD1	Q16676	465 aa		32.84	■■■□□ 2.85
TFEB-213	ENST00000425401	VGF	O15240	615 aa	Predicted RBP	32.82	■■■□□ 2.84
TFEB-213	ENST00000425401	PTPRU	Q92729	1446 aa		32.82	■■■□□ 2.84
TFEB-213	ENST00000425401	KIF1B	O60333	1816 aa		32.8	■■■□□ 2.84
TFEB-213	ENST00000425401	MET	P08581	1390 aa		32.79	■■■□□ 2.84
TFEB-213	ENST00000425401	SETBP1	Q9Y6X0	1596 aa		32.75	■■■□□ 2.83
TFEB-213	ENST00000425401	PHLPP1	O60346	1717 aa		32.74	■■■□□ 2.83
TFEB-213	ENST00000425401	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.74	■■■□□ 2.83
TFEB-213	ENST00000425401	NEXMIF	Q5QGS0	1516 aa		32.73	■■■□□ 2.83
TFEB-213	ENST00000425401	RGL3	Q3MIN7	710 aa		32.72	■■■□□ 2.83
TFEB-213	ENST00000425401	MPHOSPH9	Q99550	1183 aa		32.72	■■■□□ 2.83
TFEB-213	ENST00000425401	NRXN3	Q9Y4C0	1643 aa		32.72	■■■□□ 2.83
TFEB-213	ENST00000425401	RPGRIP1L	Q68CZ1	1315 aa		32.72	■■■□□ 2.83
TFEB-213	ENST00000425401	JCAD	Q9P266	1359 aa		32.7	■■■□□ 2.83
TFEB-213	ENST00000425401	RGS17	Q9UGC6	210 aa	Predicted RBP	32.68	■■■□□ 2.82
TFEB-213	ENST00000425401	MEX3C	Q5U5Q3	659 aa	Known RBP	32.67	■■■□□ 2.82
TFEB-213	ENST00000425401	BRINP3	Q76B58	766 aa		32.65	■■■□□ 2.82
TFEB-213	ENST00000425401	CCDC144A	A2RUR9	1427 aa		32.65	■■■□□ 2.82
TFEB-213	ENST00000425401	XRN1	Q8IZH2	1706 aa	Known RBP	32.62	■■■□□ 2.81
TFEB-213	ENST00000425401	DCC	P43146	1447 aa		32.59	■■■□□ 2.81
TFEB-213	ENST00000425401	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.58	■■■□□ 2.81
TFEB-213	ENST00000425401	NUTM2E	B1AL46	878 aa	Predicted RBP	32.58	■■■□□ 2.81
TFEB-213	ENST00000425401	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.58	■■■□□ 2.81
TFEB-213	ENST00000425401	POTEA	Q6S8J7	498 aa		32.57	■■■□□ 2.8
TFEB-213	ENST00000425401	ACIN1	Q9UKV3	1341 aa	Known RBP	32.55	■■■□□ 2.8
TFEB-213	ENST00000425401	SETD5	Q9C0A6	1442 aa		32.55	■■■□□ 2.8
TFEB-213	ENST00000425401	SPATA31A6	Q5VVP1	1343 aa		32.54	■■■□□ 2.8
TFEB-213	ENST00000425401	ADGRL3	Q9HAR2	1447 aa		32.54	■■■□□ 2.8
TFEB-213	ENST00000425401	STK26	Q9P289	416 aa		32.54	■■■□□ 2.8
TFEB-213	ENST00000425401	COL16A1	Q07092	1604 aa	Predicted RBP	32.54	■■■□□ 2.8
TFEB-213	ENST00000425401	ADGRF5	Q8IZF2	1346 aa		32.52	■■■□□ 2.8
TFEB-213	ENST00000425401	MST1R	Q04912	1400 aa		32.52	■■■□□ 2.8
TFEB-213	ENST00000425401	ROBO2	Q9HCK4	1378 aa		32.51	■■■□□ 2.79
TFEB-213	ENST00000425401	DDX17	Q92841	729 aa	Known RBP	32.51	■■■□□ 2.79
TFEB-213	ENST00000425401	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.5	■■■□□ 2.79
TFEB-213	ENST00000425401	PPL	O60437	1756 aa		32.49	■■■□□ 2.79
TFEB-213	ENST00000425401	ASXL1	Q8IXJ9	1541 aa		32.48	■■■□□ 2.79
TFEB-213	ENST00000425401	LRRC59	Q96AG4	307 aa	Known RBP	32.48	■■■□□ 2.79
TFEB-213	ENST00000425401	ANKRD30B	Q9BXX2	1392 aa		32.46	■■■□□ 2.79
TFEB-213	ENST00000425401	PTCH1	Q13635	1447 aa		32.45	■■■□□ 2.79
TFEB-213	ENST00000425401	TMEM132E	Q6IEE7	984 aa		32.44	■■■□□ 2.78
TFEB-213	ENST00000425401	NALCN	Q8IZF0	1738 aa		32.43	■■■□□ 2.78
TFEB-213	ENST00000425401	RAB3GAP2	Q9H2M9	1393 aa		32.43	■■■□□ 2.78
TFEB-213	ENST00000425401	ORAI2	Q96SN7	254 aa		32.42	■■■□□ 2.78
TFEB-213	ENST00000425401	ZNF772	Q68DY9	489 aa	Predicted RBP	32.41	■■■□□ 2.78
TFEB-213	ENST00000425401	SPATA31E1	Q6ZUB1	1445 aa		32.41	■■■□□ 2.78
TFEB-213	ENST00000425401	C1orf167	Q5SNV9	1468 aa		32.4	■■■□□ 2.78
TFEB-213	ENST00000425401	WAPL	Q7Z5K2	1190 aa		32.39	■■■□□ 2.78
TFEB-213	ENST00000425401	LRP6	O75581	1613 aa		32.39	■■■□□ 2.78
TFEB-213	ENST00000425401	SETD1A	O15047	1707 aa	Known RBP	32.39	■■■□□ 2.78
TFEB-213	ENST00000425401	ESCO1	Q5FWF5	840 aa		32.37	■■■□□ 2.77
TFEB-213	ENST00000425401	NUTM2F	A1L443	756 aa		32.36	■■■□□ 2.77
TFEB-213	ENST00000425401	SHPRH	Q149N8	1683 aa		32.36	■■■□□ 2.77
TFEB-213	ENST00000425401	C8orf37	Q96NL8	207 aa		32.31	■■■□□ 2.76
TFEB-213	ENST00000425401	LRPPRC	P42704	1394 aa	Known RBP	32.31	■■■□□ 2.76
TFEB-213	ENST00000425401	NHSL1	Q5SYE7	1610 aa		32.3	■■■□□ 2.76
TFEB-213	ENST00000425401	ADAMTS2	O95450	1211 aa		32.29	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms