RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
TPM3P9-201ENST00000424846 IQGAP1P46940 1657 aa18.61■□□□□ 0.57
TPM3P9-201ENST00000424846 SLFN5Q08AF3 891 aa18.59■□□□□ 0.57
TPM3P9-201ENST00000424846 APAF1O14727 1248 aa18.58■□□□□ 0.57
TPM3P9-201ENST00000424846 BCAR3O75815 825 aa18.58■□□□□ 0.57
TPM3P9-201ENST00000424846 RGS3P49796 1198 aa18.58■□□□□ 0.56
TPM3P9-201ENST00000424846 C8orf34Q49A92 452 aa18.58■□□□□ 0.56
TPM3P9-201ENST00000424846 CENPQQ7L2Z9 268 aaPredicted RBP18.56■□□□□ 0.56
TPM3P9-201ENST00000424846 RTN4Q9NQC3 1192 aaKnown RBP18.56■□□□□ 0.56
TPM3P9-201ENST00000424846 PLCH2O75038 1416 aa18.56■□□□□ 0.56
TPM3P9-201ENST00000424846 ABCC2Q92887 1545 aa18.56■□□□□ 0.56
TPM3P9-201ENST00000424846 MYOM1P52179 1685 aa18.56■□□□□ 0.56
TPM3P9-201ENST00000424846 ASXL1Q8IXJ9 1541 aa18.55■□□□□ 0.56
TPM3P9-201ENST00000424846 SCAF11Q99590 1463 aaKnown RBP18.55■□□□□ 0.56
TPM3P9-201ENST00000424846 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
TPM3P9-201ENST00000424846 CLTCL1P53675 1640 aa18.55■□□□□ 0.56
TPM3P9-201ENST00000424846 SYNMO15061 1565 aa18.54■□□□□ 0.56
TPM3P9-201ENST00000424846 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
TPM3P9-201ENST00000424846 ABCC1P33527 1531 aa18.53■□□□□ 0.56
TPM3P9-201ENST00000424846 TRMT2AQ8IZ69 625 aaKnown RBP18.53■□□□□ 0.56
TPM3P9-201ENST00000424846 CARD14Q9BXL6 1004 aa18.53■□□□□ 0.56
TPM3P9-201ENST00000424846 SPHKAPQ2M3C7 1700 aa18.53■□□□□ 0.56
TPM3P9-201ENST00000424846 SPAG9O60271 1321 aaKnown RBP18.53■□□□□ 0.56
TPM3P9-201ENST00000424846 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
TPM3P9-201ENST00000424846 SHROOM2Q13796 1616 aa18.52■□□□□ 0.56
TPM3P9-201ENST00000424846 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
TPM3P9-201ENST00000424846 TRPM2O94759 1503 aa18.51■□□□□ 0.55
TPM3P9-201ENST00000424846 NFKBIBQ15653 356 aa18.51■□□□□ 0.55
TPM3P9-201ENST00000424846 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
TPM3P9-201ENST00000424846 USP35Q9P2H5 1018 aa18.51■□□□□ 0.55
TPM3P9-201ENST00000424846 UGGT1Q9NYU2 1555 aa18.5■□□□□ 0.55
TPM3P9-201ENST00000424846 DDRGK1Q96HY6 314 aa18.5■□□□□ 0.55
TPM3P9-201ENST00000424846 IGHDP01880 384 aa18.5■□□□□ 0.55
TPM3P9-201ENST00000424846 CEP152O94986 1710 aa18.49■□□□□ 0.55
TPM3P9-201ENST00000424846 ADGRF5Q8IZF2 1346 aa18.49■□□□□ 0.55
TPM3P9-201ENST00000424846 PTPRTO14522 1441 aa18.49■□□□□ 0.55
TPM3P9-201ENST00000424846 ZCCHC11Q5TAX3 1644 aaKnown RBP18.49■□□□□ 0.55
TPM3P9-201ENST00000424846 SCAPERQ9BY12 1400 aa18.48■□□□□ 0.55
TPM3P9-201ENST00000424846 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
TPM3P9-201ENST00000424846 CLASP1Q7Z460 1538 aa18.47■□□□□ 0.55
TPM3P9-201ENST00000424846 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.46■□□□□ 0.55
TPM3P9-201ENST00000424846 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
TPM3P9-201ENST00000424846 ERVK-7P63135 1459 aa18.46■□□□□ 0.55
TPM3P9-201ENST00000424846 ZFYVE16Q7Z3T8 1539 aa18.46■□□□□ 0.54
TPM3P9-201ENST00000424846 KIF3BO15066 747 aa18.45■□□□□ 0.54
TPM3P9-201ENST00000424846 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
TPM3P9-201ENST00000424846 PANK1Q8TE04 598 aa18.44■□□□□ 0.54
TPM3P9-201ENST00000424846 KDM5AP29375 1690 aaKnown RBP18.43■□□□□ 0.54
TPM3P9-201ENST00000424846 NPC1L1Q9UHC9 1359 aa18.43■□□□□ 0.54
TPM3P9-201ENST00000424846 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
TPM3P9-201ENST00000424846 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
TPM3P9-201ENST00000424846 RRP7AQ9Y3A4 280 aaKnown RBP18.43■□□□□ 0.54
TPM3P9-201ENST00000424846 SEC24BO95487 1268 aa18.43■□□□□ 0.54
TPM3P9-201ENST00000424846 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
TPM3P9-201ENST00000424846 COG6Q9Y2V7 657 aa18.42■□□□□ 0.54
TPM3P9-201ENST00000424846 ANO8Q9HCE9 1232 aaPredicted RBP18.42■□□□□ 0.54
TPM3P9-201ENST00000424846 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
TPM3P9-201ENST00000424846 E9PSI1 815 aa18.41■□□□□ 0.54
TPM3P9-201ENST00000424846 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
TPM3P9-201ENST00000424846 ABCA6Q8N139 1617 aa18.4■□□□□ 0.54
TPM3P9-201ENST00000424846 FRAT2O75474 233 aaPredicted RBP18.4■□□□□ 0.54
TPM3P9-201ENST00000424846 USP19O94966 1318 aa18.4■□□□□ 0.54
TPM3P9-201ENST00000424846 GSE1Q14687 1217 aa18.4■□□□□ 0.54
TPM3P9-201ENST00000424846 DAXXQ9UER7 740 aaPredicted RBP18.4■□□□□ 0.54
TPM3P9-201ENST00000424846 WWC1Q8IX03 1113 aa18.39■□□□□ 0.54
TPM3P9-201ENST00000424846 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
TPM3P9-201ENST00000424846 TET3O43151 1660 aa18.39■□□□□ 0.53
TPM3P9-201ENST00000424846 RTEL1-TNFRSF6BF6WH68 1400 aa18.37■□□□□ 0.53
TPM3P9-201ENST00000424846 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
TPM3P9-201ENST00000424846 MAP3K4Q9Y6R4 1608 aa18.36■□□□□ 0.53
TPM3P9-201ENST00000424846 SLC12A5Q9H2X9 1139 aa18.36■□□□□ 0.53
TPM3P9-201ENST00000424846 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
TPM3P9-201ENST00000424846 TRAK1Q9UPV9 953 aa18.35■□□□□ 0.53
TPM3P9-201ENST00000424846 RLBP1P12271 317 aa18.35■□□□□ 0.53
TPM3P9-201ENST00000424846 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
TPM3P9-201ENST00000424846 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
TPM3P9-201ENST00000424846 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
TPM3P9-201ENST00000424846 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
TPM3P9-201ENST00000424846 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
TPM3P9-201ENST00000424846 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
TPM3P9-201ENST00000424846 KANK1Q14678 1352 aa18.33■□□□□ 0.53
TPM3P9-201ENST00000424846 CHGAP10645 457 aaKnown RBP18.33■□□□□ 0.53
TPM3P9-201ENST00000424846 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.53
TPM3P9-201ENST00000424846 KIAA1210Q9ULL0 1709 aa18.33■□□□□ 0.53
TPM3P9-201ENST00000424846 NSD3Q9BZ95 1437 aa18.33■□□□□ 0.52
TPM3P9-201ENST00000424846 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
TPM3P9-201ENST00000424846 PDE3AQ14432 1141 aa18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 CGNL1Q0VF96 1302 aa18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 FANCAO15360 1455 aa18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 INO80Q9ULG1 1556 aaPredicted RBP18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 POLR3AO14802 1390 aaPredicted RBP18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 SHPRHQ149N8 1683 aa18.31■□□□□ 0.52
TPM3P9-201ENST00000424846 NOS1P29475 1434 aa18.3■□□□□ 0.52
TPM3P9-201ENST00000424846 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
TPM3P9-201ENST00000424846 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
TPM3P9-201ENST00000424846 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
TPM3P9-201ENST00000424846 MYOM2P54296 1465 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms