RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 RAPGEF3O95398 923 aa11.39□□□□□ -0.59
SCN2A-204ENST00000424833 KIAA1210Q9ULL0 1709 aa11.39□□□□□ -0.59
SCN2A-204ENST00000424833 MYOM2P54296 1465 aa11.38□□□□□ -0.59
SCN2A-204ENST00000424833 KIF1BO60333 1816 aa11.38□□□□□ -0.59
SCN2A-204ENST00000424833 SIGLEC1Q9BZZ2 1709 aa11.38□□□□□ -0.59
SCN2A-204ENST00000424833 NRXN1Q9ULB1 1477 aa11.37□□□□□ -0.59
SCN2A-204ENST00000424833 CAMSAP1Q5T5Y3 1602 aa11.37□□□□□ -0.59
SCN2A-204ENST00000424833 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
SCN2A-204ENST00000424833 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
SCN2A-204ENST00000424833 CYB5RLQ6IPT4 315 aa11.36□□□□□ -0.59
SCN2A-204ENST00000424833 YEATS2Q9ULM3 1422 aa11.36□□□□□ -0.59
SCN2A-204ENST00000424833 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
SCN2A-204ENST00000424833 CNGB1Q14028 1251 aaPredicted RBP11.35□□□□□ -0.59
SCN2A-204ENST00000424833 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
SCN2A-204ENST00000424833 PARD3Q8TEW0 1356 aa11.34□□□□□ -0.59
SCN2A-204ENST00000424833 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
SCN2A-204ENST00000424833 PIK3C2BO00750 1634 aa11.34□□□□□ -0.59
SCN2A-204ENST00000424833 ADGRF5Q8IZF2 1346 aa11.33□□□□□ -0.59
SCN2A-204ENST00000424833 SYNMO15061 1565 aa11.33□□□□□ -0.6
SCN2A-204ENST00000424833 MYOM1P52179 1685 aa11.33□□□□□ -0.6
SCN2A-204ENST00000424833 FKBP8Q14318 412 aa11.33□□□□□ -0.6
SCN2A-204ENST00000424833 ZMYM4Q5VZL5 1548 aa11.33□□□□□ -0.6
SCN2A-204ENST00000424833 PPLO60437 1756 aa11.33□□□□□ -0.6
SCN2A-204ENST00000424833 ZBED9Q6R2W3 1325 aa11.33□□□□□ -0.6
SCN2A-204ENST00000424833 NOS1P29475 1434 aa11.33□□□□□ -0.6
SCN2A-204ENST00000424833 GGT6Q6P531 493 aa11.32□□□□□ -0.6
SCN2A-204ENST00000424833 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
SCN2A-204ENST00000424833 CFAP65Q6ZU64 1925 aaKnown RBP11.32□□□□□ -0.6
SCN2A-204ENST00000424833 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
SCN2A-204ENST00000424833 ZC3H13Q5T200 1668 aaKnown RBP11.31□□□□□ -0.6
SCN2A-204ENST00000424833 LRPPRCP42704 1394 aaKnown RBP11.31□□□□□ -0.6
SCN2A-204ENST00000424833 TMF1P82094 1093 aa11.3□□□□□ -0.6
SCN2A-204ENST00000424833 MYBBP1AQ9BQG0 1328 aaKnown RBP11.3□□□□□ -0.6
SCN2A-204ENST00000424833 BRD4O60885 1362 aaPredicted RBP11.3□□□□□ -0.6
SCN2A-204ENST00000424833 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
SCN2A-204ENST00000424833 RALBP1Q15311 655 aa11.3□□□□□ -0.6
SCN2A-204ENST00000424833 CFAP70Q5T0N1 1121 aa11.3□□□□□ -0.6
SCN2A-204ENST00000424833 PIK3C2GO75747 1445 aa11.3□□□□□ -0.6
SCN2A-204ENST00000424833 ARHGAP31Q2M1Z3 1444 aa11.29□□□□□ -0.6
SCN2A-204ENST00000424833 SETBP1Q9Y6X0 1596 aa11.29□□□□□ -0.6
SCN2A-204ENST00000424833 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
SCN2A-204ENST00000424833 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
SCN2A-204ENST00000424833 BCANQ96GW7 911 aa11.28□□□□□ -0.6
SCN2A-204ENST00000424833 PANK3Q9H999 370 aa11.28□□□□□ -0.6
SCN2A-204ENST00000424833 TSPOAP1O95153 1857 aa11.28□□□□□ -0.6
SCN2A-204ENST00000424833 EIF5BO60841 1220 aaKnown RBP11.28□□□□□ -0.6
SCN2A-204ENST00000424833 ERVK-7P63135 1459 aa11.27□□□□□ -0.6
SCN2A-204ENST00000424833 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
SCN2A-204ENST00000424833 NEXMIFQ5QGS0 1516 aa11.27□□□□□ -0.61
SCN2A-204ENST00000424833 KDM5AP29375 1690 aaKnown RBP11.26□□□□□ -0.61
SCN2A-204ENST00000424833 EIF3AQ14152 1382 aaKnown RBP11.26□□□□□ -0.61
SCN2A-204ENST00000424833 TMC1Q8TDI8 760 aa11.25□□□□□ -0.61
SCN2A-204ENST00000424833 PREX1Q8TCU6 1659 aa11.25□□□□□ -0.61
SCN2A-204ENST00000424833 REREQ9P2R6 1566 aa11.25□□□□□ -0.61
SCN2A-204ENST00000424833 NLRP13Q86W25 1043 aa11.25□□□□□ -0.61
SCN2A-204ENST00000424833 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
SCN2A-204ENST00000424833 NEFLP07196 543 aa11.24□□□□□ -0.61
SCN2A-204ENST00000424833 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
SCN2A-204ENST00000424833 MYO5BQ9ULV0 1848 aa11.24□□□□□ -0.61
SCN2A-204ENST00000424833 SBNO2Q9Y2G9 1366 aa11.23□□□□□ -0.61
SCN2A-204ENST00000424833 SMG6Q86US8 1419 aaKnown RBP11.23□□□□□ -0.61
SCN2A-204ENST00000424833 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
SCN2A-204ENST00000424833 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
SCN2A-204ENST00000424833 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
SCN2A-204ENST00000424833 QRICH2Q9H0J4 1663 aa11.22□□□□□ -0.61
SCN2A-204ENST00000424833 TMEM131LA2VDJ0 1609 aa11.22□□□□□ -0.61
SCN2A-204ENST00000424833 C14orf93Q9H972 538 aaKnown RBP11.22□□□□□ -0.61
SCN2A-204ENST00000424833 AGLP35573 1532 aa11.21□□□□□ -0.61
SCN2A-204ENST00000424833 ASXL1Q8IXJ9 1541 aa11.21□□□□□ -0.61
SCN2A-204ENST00000424833 RPGRIP1LQ68CZ1 1315 aa11.21□□□□□ -0.61
SCN2A-204ENST00000424833 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.61
SCN2A-204ENST00000424833 ARHGEF28Q8N1W1 1705 aaKnown RBP11.2□□□□□ -0.62
SCN2A-204ENST00000424833 IDI1Q13907 227 aa11.2□□□□□ -0.62
SCN2A-204ENST00000424833 CDCA8Q53HL2 280 aa11.2□□□□□ -0.62
SCN2A-204ENST00000424833 HOMEZQ8IX15 550 aa11.2□□□□□ -0.62
SCN2A-204ENST00000424833 BLMP54132 1417 aaPredicted RBP11.2□□□□□ -0.62
SCN2A-204ENST00000424833 ARHGEF40Q8TER5 1519 aa11.19□□□□□ -0.62
SCN2A-204ENST00000424833 ZFYVE9O95405 1425 aa11.18□□□□□ -0.62
SCN2A-204ENST00000424833 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
SCN2A-204ENST00000424833 CLTCQ00610 1675 aaKnown RBP11.18□□□□□ -0.62
SCN2A-204ENST00000424833 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
SCN2A-204ENST00000424833 TMEM132EQ6IEE7 984 aa11.18□□□□□ -0.62
SCN2A-204ENST00000424833 CENPJQ9HC77 1338 aaPredicted RBP11.17□□□□□ -0.62
SCN2A-204ENST00000424833 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
SCN2A-204ENST00000424833 INSRP06213 1382 aa11.17□□□□□ -0.62
SCN2A-204ENST00000424833 TULP4Q9NRJ4 1543 aa11.17□□□□□ -0.62
SCN2A-204ENST00000424833 PPP2R1AP30153 589 aa11.16□□□□□ -0.62
SCN2A-204ENST00000424833 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
SCN2A-204ENST00000424833 CARD14Q9BXL6 1004 aa11.16□□□□□ -0.62
SCN2A-204ENST00000424833 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
SCN2A-204ENST00000424833 TRAK1Q9UPV9 953 aa11.16□□□□□ -0.62
SCN2A-204ENST00000424833 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
SCN2A-204ENST00000424833 RNF123Q5XPI4 1314 aa11.16□□□□□ -0.62
SCN2A-204ENST00000424833 SLC52A1Q9NWF4 448 aa11.16□□□□□ -0.62
SCN2A-204ENST00000424833 TAOK2Q9UL54 1235 aa11.16□□□□□ -0.62
SCN2A-204ENST00000424833 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
SCN2A-204ENST00000424833 SPATA31D1Q6ZQQ2 1576 aa11.15□□□□□ -0.62
SCN2A-204ENST00000424833 VGFO15240 615 aaPredicted RBP11.14□□□□□ -0.63
SCN2A-204ENST00000424833 PTPRMP28827 1452 aa11.12□□□□□ -0.63
SCN2A-204ENST00000424833 ERICH6BQ5W0A0 696 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms