RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
LMO3-206ENST00000424192 ARHGAP23Q9P227 1491 aa17.27■□□□□ 0.36
LMO3-206ENST00000424192 TMEM131LA2VDJ0 1609 aa17.26■□□□□ 0.35
LMO3-206ENST00000424192 CLTCL1P53675 1640 aa17.26■□□□□ 0.35
LMO3-206ENST00000424192 IDI1Q13907 227 aa17.26■□□□□ 0.35
LMO3-206ENST00000424192 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
LMO3-206ENST00000424192 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
LMO3-206ENST00000424192 TMEM2Q9UHN6 1383 aa17.24■□□□□ 0.35
LMO3-206ENST00000424192 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
LMO3-206ENST00000424192 KIF1BO60333 1816 aa17.23■□□□□ 0.35
LMO3-206ENST00000424192 NEURL4Q96JN8 1562 aa17.23■□□□□ 0.35
LMO3-206ENST00000424192 ANKLE2Q86XL3 938 aa17.22■□□□□ 0.35
LMO3-206ENST00000424192 MED14O60244 1454 aa17.22■□□□□ 0.35
LMO3-206ENST00000424192 EID1Q9Y6B2 187 aa17.21■□□□□ 0.35
LMO3-206ENST00000424192 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
LMO3-206ENST00000424192 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
LMO3-206ENST00000424192 ZFYVE9O95405 1425 aa17.19■□□□□ 0.34
LMO3-206ENST00000424192 MYO5BQ9ULV0 1848 aa17.18■□□□□ 0.34
LMO3-206ENST00000424192 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
LMO3-206ENST00000424192 RIMS2Q9UQ26 1411 aa17.18■□□□□ 0.34
LMO3-206ENST00000424192 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
LMO3-206ENST00000424192 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
LMO3-206ENST00000424192 ANKRD30BQ9BXX2 1392 aa17.15■□□□□ 0.34
LMO3-206ENST00000424192 NCKAP5LQ9HCH0 1330 aa17.15■□□□□ 0.34
LMO3-206ENST00000424192 NEXMIFQ5QGS0 1516 aa17.13■□□□□ 0.33
LMO3-206ENST00000424192 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
LMO3-206ENST00000424192 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
LMO3-206ENST00000424192 DIP2AQ14689 1571 aa17.13■□□□□ 0.33
LMO3-206ENST00000424192 RPGRIP1LQ68CZ1 1315 aa17.13■□□□□ 0.33
LMO3-206ENST00000424192 PLEKHG1Q9ULL1 1385 aa17.13■□□□□ 0.33
LMO3-206ENST00000424192 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
LMO3-206ENST00000424192 SPATA31E1Q6ZUB1 1445 aa17.12■□□□□ 0.33
LMO3-206ENST00000424192 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
LMO3-206ENST00000424192 LTKP29376 864 aa17.09■□□□□ 0.33
LMO3-206ENST00000424192 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
LMO3-206ENST00000424192 PPLO60437 1756 aa17.09■□□□□ 0.33
LMO3-206ENST00000424192 DHX57Q6P158 1386 aaKnown RBP17.08■□□□□ 0.32
LMO3-206ENST00000424192 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
LMO3-206ENST00000424192 PCGF6Q9BYE7 350 aa17.07■□□□□ 0.32
LMO3-206ENST00000424192 MYOM2P54296 1465 aa17.05■□□□□ 0.32
LMO3-206ENST00000424192 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
LMO3-206ENST00000424192 CPS1P31327 1500 aa17.05■□□□□ 0.32
LMO3-206ENST00000424192 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
LMO3-206ENST00000424192 PIK3R4Q99570 1358 aa17.02■□□□□ 0.32
LMO3-206ENST00000424192 BCANQ96GW7 911 aa17.02■□□□□ 0.32
LMO3-206ENST00000424192 STAC3Q96MF2 364 aa17.02■□□□□ 0.32
LMO3-206ENST00000424192 NWD1Q149M9 1564 aa17.02■□□□□ 0.31
LMO3-206ENST00000424192 IQSEC2Q5JU85 1478 aa17.01■□□□□ 0.31
LMO3-206ENST00000424192 NRXN3Q9Y4C0 1643 aa17.01■□□□□ 0.31
LMO3-206ENST00000424192 NKTRP30414 1462 aaKnown RBP17■□□□□ 0.31
LMO3-206ENST00000424192 LAMC1P11047 1609 aa17■□□□□ 0.31
LMO3-206ENST00000424192 LTBP4Q8N2S1 1624 aa17■□□□□ 0.31
LMO3-206ENST00000424192 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
LMO3-206ENST00000424192 TBX22Q9Y458 520 aa16.99■□□□□ 0.31
LMO3-206ENST00000424192 NRXN1Q9ULB1 1477 aa16.99■□□□□ 0.31
LMO3-206ENST00000424192 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
LMO3-206ENST00000424192 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
LMO3-206ENST00000424192 CLSPNQ9HAW4 1339 aa16.97■□□□□ 0.31
LMO3-206ENST00000424192 PIK3C2GO75747 1445 aa16.97■□□□□ 0.31
LMO3-206ENST00000424192 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
LMO3-206ENST00000424192 SLC26A8Q96RN1 970 aa16.96■□□□□ 0.31
LMO3-206ENST00000424192 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
LMO3-206ENST00000424192 SETD1AO15047 1707 aaKnown RBP16.95■□□□□ 0.3
LMO3-206ENST00000424192 ALKQ9UM73 1620 aa16.95■□□□□ 0.3
LMO3-206ENST00000424192 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
LMO3-206ENST00000424192 KCNA6P17658 529 aa16.93■□□□□ 0.3
LMO3-206ENST00000424192 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
LMO3-206ENST00000424192 PRAG1Q86YV5 1406 aa16.93■□□□□ 0.3
LMO3-206ENST00000424192 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
LMO3-206ENST00000424192 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
LMO3-206ENST00000424192 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
LMO3-206ENST00000424192 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
LMO3-206ENST00000424192 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
LMO3-206ENST00000424192 LRRC7Q96NW7 1537 aa16.9■□□□□ 0.3
LMO3-206ENST00000424192 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
LMO3-206ENST00000424192 DCAF11Q8TEB1 546 aa16.89■□□□□ 0.29
LMO3-206ENST00000424192 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
LMO3-206ENST00000424192 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
LMO3-206ENST00000424192 KIAA1210Q9ULL0 1709 aa16.87■□□□□ 0.29
LMO3-206ENST00000424192 METP08581 1390 aa16.87■□□□□ 0.29
LMO3-206ENST00000424192 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
LMO3-206ENST00000424192 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
LMO3-206ENST00000424192 TECPR2O15040 1411 aa16.86■□□□□ 0.29
LMO3-206ENST00000424192 ASXL1Q8IXJ9 1541 aa16.86■□□□□ 0.29
LMO3-206ENST00000424192 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
LMO3-206ENST00000424192 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
LMO3-206ENST00000424192 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
LMO3-206ENST00000424192 C14orf93Q9H972 538 aaKnown RBP16.84■□□□□ 0.29
LMO3-206ENST00000424192 LRPPRCP42704 1394 aaKnown RBP16.83■□□□□ 0.28
LMO3-206ENST00000424192 TMEM94Q12767 1356 aa16.83■□□□□ 0.28
LMO3-206ENST00000424192 AMOTL2Q9Y2J4 779 aa16.83■□□□□ 0.28
LMO3-206ENST00000424192 ADGRB1O14514 1584 aa16.82■□□□□ 0.28
LMO3-206ENST00000424192 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
LMO3-206ENST00000424192 CCER1Q8TC90 406 aaPredicted RBP16.82■□□□□ 0.28
LMO3-206ENST00000424192 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
LMO3-206ENST00000424192 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
LMO3-206ENST00000424192 YTHDC2Q9H6S0 1430 aaKnown RBP16.81■□□□□ 0.28
LMO3-206ENST00000424192 MSH6P52701 1360 aa16.81■□□□□ 0.28
LMO3-206ENST00000424192 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
LMO3-206ENST00000424192 DCCP43146 1447 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms