RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PLCH2O75038 1416 aa19.97■□□□□ 0.79
C9orf3-204ENST00000424143 CEP152O94986 1710 aa19.96■□□□□ 0.79
C9orf3-204ENST00000424143 RGL3Q3MIN7 710 aa19.96■□□□□ 0.79
C9orf3-204ENST00000424143 CC2D1BQ5T0F9 858 aaKnown RBP19.96■□□□□ 0.79
C9orf3-204ENST00000424143 TRMT2AQ8IZ69 625 aaKnown RBP19.96■□□□□ 0.79
C9orf3-204ENST00000424143 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
C9orf3-204ENST00000424143 AMER1Q5JTC6 1135 aaPredicted RBP19.95■□□□□ 0.78
C9orf3-204ENST00000424143 DUSP27Q5VZP5 1158 aa19.95■□□□□ 0.78
C9orf3-204ENST00000424143 ADAMTS8Q9UP79 889 aa19.94■□□□□ 0.78
C9orf3-204ENST00000424143 KNSTRNQ9Y448 316 aa19.94■□□□□ 0.78
C9orf3-204ENST00000424143 ABCC1P33527 1531 aa19.92■□□□□ 0.78
C9orf3-204ENST00000424143 DEPDC5O75140 1603 aa19.92■□□□□ 0.78
C9orf3-204ENST00000424143 GOLGA2Q08379 1002 aa19.92■□□□□ 0.78
C9orf3-204ENST00000424143 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
C9orf3-204ENST00000424143 PLEKHH1Q9ULM0 1364 aa19.91■□□□□ 0.78
C9orf3-204ENST00000424143 WDR43Q15061 677 aaKnown RBP eCLIP19.91■□□□□ 0.78
C9orf3-204ENST00000424143 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
C9orf3-204ENST00000424143 NEFMP07197 916 aa19.9■□□□□ 0.78
C9orf3-204ENST00000424143 SLFN5Q08AF3 891 aa19.9■□□□□ 0.78
C9orf3-204ENST00000424143 FAM161AQ3B820 660 aa19.89■□□□□ 0.77
C9orf3-204ENST00000424143 NPM2Q86SE8 214 aaKnown RBP19.89■□□□□ 0.77
C9orf3-204ENST00000424143 MYOM1P52179 1685 aa19.89■□□□□ 0.77
C9orf3-204ENST00000424143 NINLQ9Y2I6 1382 aa19.88■□□□□ 0.77
C9orf3-204ENST00000424143 TET3O43151 1660 aa19.88■□□□□ 0.77
C9orf3-204ENST00000424143 SENP3-EIF4A1A0A087X0R7 540 aa19.88■□□□□ 0.77
C9orf3-204ENST00000424143 PLIN1O60240 522 aa19.88■□□□□ 0.77
C9orf3-204ENST00000424143 EFCAB2Q5VUJ9 269 aa19.88■□□□□ 0.77
C9orf3-204ENST00000424143 VWDEQ8N2E2 1590 aa19.87■□□□□ 0.77
C9orf3-204ENST00000424143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.87■□□□□ 0.772e-13■■□□□ 12.2
C9orf3-204ENST00000424143 KDM5AP29375 1690 aaKnown RBP19.86■□□□□ 0.77
C9orf3-204ENST00000424143 NKTRP30414 1462 aaKnown RBP19.84■□□□□ 0.77
C9orf3-204ENST00000424143 MYOM2P54296 1465 aa19.84■□□□□ 0.77
C9orf3-204ENST00000424143 AAMPQ13685 434 aa19.84■□□□□ 0.77
C9orf3-204ENST00000424143 CHD1O14646 1710 aa19.83■□□□□ 0.76
C9orf3-204ENST00000424143 CLTCL1P53675 1640 aa19.82■□□□□ 0.76
C9orf3-204ENST00000424143 C20orf194Q5TEA3 1177 aa19.82■□□□□ 0.76
C9orf3-204ENST00000424143 ZMYM3Q14202 1370 aa19.82■□□□□ 0.76
C9orf3-204ENST00000424143 E9PSI1 815 aa19.81■□□□□ 0.76
C9orf3-204ENST00000424143 SBNO2Q9Y2G9 1366 aa19.81■□□□□ 0.76
C9orf3-204ENST00000424143 VIRMAQ69YN4 1812 aaKnown RBP19.8■□□□□ 0.76
C9orf3-204ENST00000424143 MYO3AQ8NEV4 1616 aa19.8■□□□□ 0.76
C9orf3-204ENST00000424143 C8orf34Q49A92 452 aa19.8■□□□□ 0.76
C9orf3-204ENST00000424143 ZFYVE16Q7Z3T8 1539 aa19.8■□□□□ 0.76
C9orf3-204ENST00000424143 PDE3AQ14432 1141 aa19.8■□□□□ 0.76
C9orf3-204ENST00000424143 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
C9orf3-204ENST00000424143 LAS1LQ9Y4W2 734 aaKnown RBP19.79■□□□□ 0.76
C9orf3-204ENST00000424143 ZCCHC11Q5TAX3 1644 aaKnown RBP19.78■□□□□ 0.76
C9orf3-204ENST00000424143 TRAPPC8Q9Y2L5 1435 aa19.78■□□□□ 0.76
C9orf3-204ENST00000424143 POLR3AO14802 1390 aaPredicted RBP19.77■□□□□ 0.76
C9orf3-204ENST00000424143 MAP3K4Q9Y6R4 1608 aa19.77■□□□□ 0.76
C9orf3-204ENST00000424143 CGNL1Q0VF96 1302 aa19.77■□□□□ 0.75
C9orf3-204ENST00000424143 NRXN1Q9ULB1 1477 aa19.75■□□□□ 0.75
C9orf3-204ENST00000424143 GSE1Q14687 1217 aa19.75■□□□□ 0.75
C9orf3-204ENST00000424143 NFKBIBQ15653 356 aa19.75■□□□□ 0.75
C9orf3-204ENST00000424143 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
C9orf3-204ENST00000424143 KANK1Q14678 1352 aa19.75■□□□□ 0.75
C9orf3-204ENST00000424143 SPAG9O60271 1321 aaKnown RBP19.74■□□□□ 0.75
C9orf3-204ENST00000424143 IFT172Q9UG01 1749 aa19.74■□□□□ 0.75
C9orf3-204ENST00000424143 INO80Q9ULG1 1556 aaPredicted RBP19.73■□□□□ 0.75
C9orf3-204ENST00000424143 ERVK-7P63135 1459 aa19.73■□□□□ 0.75
C9orf3-204ENST00000424143 SETBP1Q9Y6X0 1596 aa19.72■□□□□ 0.75
C9orf3-204ENST00000424143 MAPK8IP3Q9UPT6 1336 aa19.72■□□□□ 0.75
C9orf3-204ENST00000424143 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
C9orf3-204ENST00000424143 USP32Q8NFA0 1604 aa19.69■□□□□ 0.74
C9orf3-204ENST00000424143 LMTK2Q8IWU2 1503 aa19.69■□□□□ 0.74
C9orf3-204ENST00000424143 KIF1BO60333 1816 aa19.68■□□□□ 0.74
C9orf3-204ENST00000424143 ABCA9Q8IUA7 1624 aa19.68■□□□□ 0.74
C9orf3-204ENST00000424143 ATP7AQ04656 1500 aa19.67■□□□□ 0.74
C9orf3-204ENST00000424143 APAF1O14727 1248 aa19.67■□□□□ 0.74
C9orf3-204ENST00000424143 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
C9orf3-204ENST00000424143 FANCAO15360 1455 aa19.66■□□□□ 0.74
C9orf3-204ENST00000424143 PUS7Q96PZ0 661 aaKnown RBP19.65■□□□□ 0.74
C9orf3-204ENST00000424143 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
C9orf3-204ENST00000424143 MROH1Q8NDA8 1641 aa19.65■□□□□ 0.74
C9orf3-204ENST00000424143 EFCAB6Q5THR3 1501 aa19.63■□□□□ 0.73
C9orf3-204ENST00000424143 CCDC27Q2M243 656 aa19.63■□□□□ 0.73
C9orf3-204ENST00000424143 SKAP1Q86WV1 359 aa19.63■□□□□ 0.73
C9orf3-204ENST00000424143 WDR63Q8IWG1 891 aa19.62■□□□□ 0.73
C9orf3-204ENST00000424143 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
C9orf3-204ENST00000424143 CENPJQ9HC77 1338 aaPredicted RBP19.62■□□□□ 0.73
C9orf3-204ENST00000424143 SHPRHQ149N8 1683 aa19.62■□□□□ 0.73
C9orf3-204ENST00000424143 PMFBP1Q8TBY8 1022 aa19.62■□□□□ 0.73
C9orf3-204ENST00000424143 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
C9orf3-204ENST00000424143 USP19O94966 1318 aa19.61■□□□□ 0.73
C9orf3-204ENST00000424143 IQSEC2Q5JU85 1478 aa19.61■□□□□ 0.73
C9orf3-204ENST00000424143 ZC3H13Q5T200 1668 aaKnown RBP19.61■□□□□ 0.73
C9orf3-204ENST00000424143 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
C9orf3-204ENST00000424143 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
C9orf3-204ENST00000424143 IL27Q8NEV9 243 aa19.6■□□□□ 0.73
C9orf3-204ENST00000424143 BCAR3O75815 825 aa19.59■□□□□ 0.73
C9orf3-204ENST00000424143 ADGRB3O60242 1522 aa19.59■□□□□ 0.73
C9orf3-204ENST00000424143 ADGRL1O94910 1474 aa19.59■□□□□ 0.73
C9orf3-204ENST00000424143 BECN1Q14457 450 aa19.58■□□□□ 0.73
C9orf3-204ENST00000424143 CCDC146Q8IYE0 955 aa19.58■□□□□ 0.72
C9orf3-204ENST00000424143 RUNDC1Q96C34 613 aa19.58■□□□□ 0.72
C9orf3-204ENST00000424143 IGHDP01880 384 aa19.57■□□□□ 0.72
C9orf3-204ENST00000424143 CT47B1P0C2W7 299 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-204ENST00000424143 FRAT1Q92837 279 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-204ENST00000424143 NLRP1Q9C000 1473 aa19.55■□□□□ 0.72
C9orf3-204ENST00000424143 RGS3P49796 1198 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms