RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 LMOD3Q0VAK6 560 aa8.52□□□□□ -1.05
CNOT4-205ENST00000423368 BCL2L12Q9HB09 334 aa8.52□□□□□ -1.05
CNOT4-205ENST00000423368 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.52□□□□□ -1.05
CNOT4-205ENST00000423368 MAPKBP1O60336 1514 aa8.52□□□□□ -1.05
CNOT4-205ENST00000423368 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-205ENST00000423368 LMOD2Q6P5Q4 547 aa8.51□□□□□ -1.05
CNOT4-205ENST00000423368 FOXD4L4Q8WXT5 416 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-205ENST00000423368 RNF25Q96BH1 459 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-205ENST00000423368 KIF3AQ9Y496 699 aa8.51□□□□□ -1.05
CNOT4-205ENST00000423368 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-205ENST00000423368 NBPF1Q3BBV0 1214 aa8.51□□□□□ -1.05
CNOT4-205ENST00000423368 DNAJC21Q5F1R6 531 aaKnown RBP8.51□□□□□ -1.05
CNOT4-205ENST00000423368 NPHP1O15259 732 aa8.51□□□□□ -1.05
CNOT4-205ENST00000423368 CENPQQ7L2Z9 268 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-205ENST00000423368 TNPO1Q92973 898 aaKnown RBP8.51□□□□□ -1.05
CNOT4-205ENST00000423368 DDX11L8A8MPP1 907 aa8.5□□□□□ -1.05
CNOT4-205ENST00000423368 CCNB3Q8WWL7 1395 aa8.5□□□□□ -1.05
CNOT4-205ENST00000423368 OS9Q13438 667 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-205ENST00000423368 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-205ENST00000423368 ST7Q9NRC1 585 aa8.5□□□□□ -1.05
CNOT4-205ENST00000423368 NOL7Q9UMY1 257 aaKnown RBP8.5□□□□□ -1.05
CNOT4-205ENST00000423368 CCDC66A2RUB6 948 aa8.49□□□□□ -1.05
CNOT4-205ENST00000423368 SART3Q15020 963 aaKnown RBP8.49□□□□□ -1.05
CNOT4-205ENST00000423368 RALBP1Q15311 655 aa8.49□□□□□ -1.05
CNOT4-205ENST00000423368 ZBTB12Q9Y330 459 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-205ENST00000423368 CSPP1Q1MSJ5 1256 aa8.49□□□□□ -1.05
CNOT4-205ENST00000423368 C10orf67Q8IYJ2 551 aa8.49□□□□□ -1.05
CNOT4-205ENST00000423368 CHAMP1Q96JM3 812 aa8.49□□□□□ -1.05
CNOT4-205ENST00000423368 ZKSCAN5Q9Y2L8 839 aa8.49□□□□□ -1.05
CNOT4-205ENST00000423368 CT47A1Q5JQC4 288 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-205ENST00000423368 RBM27Q9P2N5 1060 aaKnown RBP8.49□□□□□ -1.05
CNOT4-205ENST00000423368 CIZ1Q9ULV3 898 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-205ENST00000423368 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
CNOT4-205ENST00000423368 RBSNQ9H1K0 784 aa8.48□□□□□ -1.05
CNOT4-205ENST00000423368 TTC12Q9H892 705 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-205ENST00000423368 VPS8Q8N3P4 1428 aa8.48□□□□□ -1.05
CNOT4-205ENST00000423368 GTF2F1P35269 517 aaKnown RBP eCLIP8.48□□□□□ -1.05
CNOT4-205ENST00000423368 TERF1P54274 439 aa8.48□□□□□ -1.05
CNOT4-205ENST00000423368 FOXD4L6Q3SYB3 417 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-205ENST00000423368 FOXD4L3Q6VB84 417 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-205ENST00000423368 MYRIPQ8NFW9 859 aa8.48□□□□□ -1.05
CNOT4-205ENST00000423368 HSP90AB1P08238 724 aaKnown RBP8.48□□□□□ -1.05
CNOT4-205ENST00000423368 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
CNOT4-205ENST00000423368 DRC1Q96MC2 740 aa8.48□□□□□ -1.05
CNOT4-205ENST00000423368 E2F4Q16254 413 aa8.47□□□□□ -1.05
CNOT4-205ENST00000423368 IGHDP01880 384 aa8.47□□□□□ -1.05
CNOT4-205ENST00000423368 PRIM1P49642 420 aaKnown RBP8.47□□□□□ -1.05
CNOT4-205ENST00000423368 HSCBQ8IWL3 235 aa8.47□□□□□ -1.05
CNOT4-205ENST00000423368 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.47□□□□□ -1.05
CNOT4-205ENST00000423368 V9GYY5 206 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-205ENST00000423368 KIAA2012Q0VF49 1180 aa8.46□□□□□ -1.05
CNOT4-205ENST00000423368 PPP1R9BQ96SB3 815 aa8.46□□□□□ -1.05
CNOT4-205ENST00000423368 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.05
CNOT4-205ENST00000423368 TRIM66O15016 1216 aa8.46□□□□□ -1.06
CNOT4-205ENST00000423368 ZNF500O60304 480 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-205ENST00000423368 MCTP1Q6DN14 999 aa8.46□□□□□ -1.06
CNOT4-205ENST00000423368 CNTLNQ9NXG0 1405 aa8.46□□□□□ -1.06
CNOT4-205ENST00000423368 NEUROD2Q15784 382 aa8.46□□□□□ -1.06
CNOT4-205ENST00000423368 IRF6O14896 467 aa8.45□□□□□ -1.06
CNOT4-205ENST00000423368 HSP90B1P14625 803 aaKnown RBP8.45□□□□□ -1.06
CNOT4-205ENST00000423368 PRPF38AQ8NAV1 312 aaKnown RBP8.45□□□□□ -1.06
CNOT4-205ENST00000423368 ZNF622Q969S3 477 aaKnown RBP eCLIP8.45□□□□□ -1.062e-6■□□□□ 10.1
CNOT4-205ENST00000423368 SIRT1Q96EB6 747 aa8.45□□□□□ -1.06
CNOT4-205ENST00000423368 GBP4Q96PP9 640 aa8.45□□□□□ -1.06
CNOT4-205ENST00000423368 FEZ2Q9UHY8 353 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-205ENST00000423368 DCAF8L1A6NGE4 600 aa8.45□□□□□ -1.06
CNOT4-205ENST00000423368 SSFA2P28290 1259 aa8.45□□□□□ -1.06
CNOT4-205ENST00000423368 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.45□□□□□ -1.06
CNOT4-205ENST00000423368 SLFN14P0C7P3 912 aa8.44□□□□□ -1.06
CNOT4-205ENST00000423368 SETD5Q9C0A6 1442 aa8.44□□□□□ -1.06
CNOT4-205ENST00000423368 GOLIM4O00461 696 aa8.44□□□□□ -1.06
CNOT4-205ENST00000423368 HNRNPH2P55795 449 aaKnown RBP8.44□□□□□ -1.06
CNOT4-205ENST00000423368 KIF7Q2M1P5 1343 aa8.44□□□□□ -1.06
CNOT4-205ENST00000423368 KDM2BQ8NHM5 1336 aa8.44□□□□□ -1.06
CNOT4-205ENST00000423368 SYCE3A1L190 88 aa8.43□□□□□ -1.06
CNOT4-205ENST00000423368 RIOK3O14730 519 aaKnown RBP8.43□□□□□ -1.06
CNOT4-205ENST00000423368 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
CNOT4-205ENST00000423368 GOLGA6L22H0YM25 854 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 SEMA3FQ13275 785 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 MMP14P50281 582 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 SKIDA1Q1XH10 827 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 RNF217Q8TC41 542 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 CALCOCO1Q9P1Z2 691 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
CNOT4-205ENST00000423368 GOLGA3Q08378 1498 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 CCDC7Q96M83 1385 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 RAD51AP2Q09MP3 1159 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 NOLC1Q14978 699 aaKnown RBP eCLIP8.42□□□□□ -1.06
CNOT4-205ENST00000423368 C22orf23Q9BZE7 217 aa8.42□□□□□ -1.06
CNOT4-205ENST00000423368 NEK11Q8NG66 645 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 TERF2Q15554 542 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 PIK3R5Q8WYR1 880 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 TBC1D32Q96NH3 1257 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 ANKRD65E5RJM6 399 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 DHX16O60231 1041 aaKnown RBP8.41□□□□□ -1.06
CNOT4-205ENST00000423368 ZSCAN23Q3MJ62 389 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 KCNV2Q8TDN2 545 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 CARD10Q9BWT7 1032 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 GEMIN8Q9NWZ8 242 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms