RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 XIRP1Q702N8 1843 aaKnown RBP14.58□□□□□ -0.08
ECHDC3-203ENST00000422887 SETBP1Q9Y6X0 1596 aa14.58□□□□□ -0.08
ECHDC3-203ENST00000422887 TMEM2Q9UHN6 1383 aa14.58□□□□□ -0.08
ECHDC3-203ENST00000422887 SCAF11Q99590 1463 aaKnown RBP14.57□□□□□ -0.08
ECHDC3-203ENST00000422887 HSPA2P54652 639 aa14.57□□□□□ -0.08
ECHDC3-203ENST00000422887 THEMISQ8N1K5 641 aaPredicted RBP14.56□□□□□ -0.08
ECHDC3-203ENST00000422887 STAG3Q9UJ98 1225 aa14.56□□□□□ -0.08
ECHDC3-203ENST00000422887 DIP2AQ14689 1571 aa14.56□□□□□ -0.08
ECHDC3-203ENST00000422887 NRXN1Q9ULB1 1477 aa14.55□□□□□ -0.08
ECHDC3-203ENST00000422887 NWD1Q149M9 1564 aa14.55□□□□□ -0.08
ECHDC3-203ENST00000422887 XRN1Q8IZH2 1706 aaKnown RBP14.53□□□□□ -0.08
ECHDC3-203ENST00000422887 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.08
ECHDC3-203ENST00000422887 MYOM2P54296 1465 aa14.52□□□□□ -0.08
ECHDC3-203ENST00000422887 RIMS2Q9UQ26 1411 aa14.52□□□□□ -0.08
ECHDC3-203ENST00000422887 KIAA1210Q9ULL0 1709 aa14.52□□□□□ -0.09
ECHDC3-203ENST00000422887 LAMC1P11047 1609 aa14.52□□□□□ -0.09
ECHDC3-203ENST00000422887 RPGRIP1LQ68CZ1 1315 aa14.51□□□□□ -0.09
ECHDC3-203ENST00000422887 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
ECHDC3-203ENST00000422887 NPHP4O75161 1426 aaPredicted RBP14.5□□□□□ -0.09
ECHDC3-203ENST00000422887 KNDC1Q76NI1 1749 aa14.5□□□□□ -0.09
ECHDC3-203ENST00000422887 LTKP29376 864 aa14.5□□□□□ -0.09
ECHDC3-203ENST00000422887 HDGFP51858 240 aaKnown RBP14.5□□□□□ -0.09
ECHDC3-203ENST00000422887 ASXL1Q8IXJ9 1541 aa14.5□□□□□ -0.09
ECHDC3-203ENST00000422887 ADAMTS13Q76LX8 1427 aa14.49□□□□□ -0.09
ECHDC3-203ENST00000422887 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.49□□□□□ -0.09
ECHDC3-203ENST00000422887 CCER1Q8TC90 406 aaPredicted RBP14.49□□□□□ -0.09
ECHDC3-203ENST00000422887 PLEKHG1Q9ULL1 1385 aa14.48□□□□□ -0.09
ECHDC3-203ENST00000422887 EID1Q9Y6B2 187 aa14.48□□□□□ -0.09
ECHDC3-203ENST00000422887 ZNF326Q5BKZ1 582 aaKnown RBP14.47□□□□□ -0.09
ECHDC3-203ENST00000422887 ANKLE2Q86XL3 938 aa14.47□□□□□ -0.09
ECHDC3-203ENST00000422887 STAC3Q96MF2 364 aa14.47□□□□□ -0.09
ECHDC3-203ENST00000422887 ALKQ9UM73 1620 aa14.46□□□□□ -0.09
ECHDC3-203ENST00000422887 PIK3C2GO75747 1445 aa14.46□□□□□ -0.09
ECHDC3-203ENST00000422887 PRAG1Q86YV5 1406 aa14.46□□□□□ -0.09
ECHDC3-203ENST00000422887 NCKAP5LQ9HCH0 1330 aa14.45□□□□□ -0.1
ECHDC3-203ENST00000422887 TRPM1Q7Z4N2 1603 aa14.44□□□□□ -0.1
ECHDC3-203ENST00000422887 TXNDC2Q86VQ3 553 aa14.44□□□□□ -0.1
ECHDC3-203ENST00000422887 VGFO15240 615 aaPredicted RBP14.43□□□□□ -0.1
ECHDC3-203ENST00000422887 PPP1R15AO75807 674 aaPredicted RBP14.43□□□□□ -0.1
ECHDC3-203ENST00000422887 TONSLQ96HA7 1378 aa14.43□□□□□ -0.1
ECHDC3-203ENST00000422887 ADGRB1O14514 1584 aa14.43□□□□□ -0.1
ECHDC3-203ENST00000422887 RGL3Q3MIN7 710 aa14.42□□□□□ -0.1
ECHDC3-203ENST00000422887 SIN3AQ96ST3 1273 aa14.42□□□□□ -0.1
ECHDC3-203ENST00000422887 TIMELESSQ9UNS1 1208 aa14.42□□□□□ -0.1
ECHDC3-203ENST00000422887 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
ECHDC3-203ENST00000422887 ARHGEF28Q8N1W1 1705 aaKnown RBP14.41□□□□□ -0.1
ECHDC3-203ENST00000422887 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
ECHDC3-203ENST00000422887 NKTRP30414 1462 aaKnown RBP14.39□□□□□ -0.11
ECHDC3-203ENST00000422887 NALCNQ8IZF0 1738 aa14.39□□□□□ -0.11
ECHDC3-203ENST00000422887 CPS1P31327 1500 aa14.39□□□□□ -0.11
ECHDC3-203ENST00000422887 PTPRUQ92729 1446 aa14.38□□□□□ -0.11
ECHDC3-203ENST00000422887 DCAF11Q8TEB1 546 aa14.37□□□□□ -0.11
ECHDC3-203ENST00000422887 IQSEC2Q5JU85 1478 aa14.37□□□□□ -0.11
ECHDC3-203ENST00000422887 PIK3R4Q99570 1358 aa14.36□□□□□ -0.11
ECHDC3-203ENST00000422887 L3MBTL2Q969R5 705 aa14.36□□□□□ -0.11
ECHDC3-203ENST00000422887 ADGRF5Q8IZF2 1346 aa14.36□□□□□ -0.11
ECHDC3-203ENST00000422887 TECPR2O15040 1411 aa14.35□□□□□ -0.11
ECHDC3-203ENST00000422887 LRRC7Q96NW7 1537 aa14.35□□□□□ -0.11
ECHDC3-203ENST00000422887 NUTM2DQ5VT03 806 aaPredicted RBP14.34□□□□□ -0.11
ECHDC3-203ENST00000422887 METP08581 1390 aa14.34□□□□□ -0.11
ECHDC3-203ENST00000422887 BCANQ96GW7 911 aa14.33□□□□□ -0.12
ECHDC3-203ENST00000422887 TBX22Q9Y458 520 aa14.33□□□□□ -0.12
ECHDC3-203ENST00000422887 PTCH1Q13635 1447 aa14.32□□□□□ -0.12
ECHDC3-203ENST00000422887 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
ECHDC3-203ENST00000422887 DLC1Q96QB1 1528 aa14.32□□□□□ -0.12
ECHDC3-203ENST00000422887 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
ECHDC3-203ENST00000422887 FBXO41Q8TF61 875 aa14.31□□□□□ -0.12
ECHDC3-203ENST00000422887 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
ECHDC3-203ENST00000422887 C14orf93Q9H972 538 aaKnown RBP14.29□□□□□ -0.12
ECHDC3-203ENST00000422887 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
ECHDC3-203ENST00000422887 RALGAPBQ86X10 1494 aa14.28□□□□□ -0.12
ECHDC3-203ENST00000422887 SLC26A8Q96RN1 970 aa14.28□□□□□ -0.12
ECHDC3-203ENST00000422887 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.13
ECHDC3-203ENST00000422887 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.13
ECHDC3-203ENST00000422887 QRICH2Q9H0J4 1663 aa14.26□□□□□ -0.13
ECHDC3-203ENST00000422887 CDC42BPGQ6DT37 1551 aa14.26□□□□□ -0.13
ECHDC3-203ENST00000422887 YTHDC2Q9H6S0 1430 aaKnown RBP14.25□□□□□ -0.13
ECHDC3-203ENST00000422887 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
ECHDC3-203ENST00000422887 KCNA6P17658 529 aa14.25□□□□□ -0.13
ECHDC3-203ENST00000422887 CFAP70Q5T0N1 1121 aa14.25□□□□□ -0.13
ECHDC3-203ENST00000422887 NCOA3Q9Y6Q9 1424 aa14.24□□□□□ -0.13
ECHDC3-203ENST00000422887 LRPPRCP42704 1394 aaKnown RBP14.24□□□□□ -0.13
ECHDC3-203ENST00000422887 ROCK2O75116 1388 aaKnown RBP14.23□□□□□ -0.13
ECHDC3-203ENST00000422887 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
ECHDC3-203ENST00000422887 ABCC11Q96J66 1382 aa14.22□□□□□ -0.13
ECHDC3-203ENST00000422887 ROBO2Q9HCK4 1378 aa14.22□□□□□ -0.13
ECHDC3-203ENST00000422887 TOPAZ1Q8N9V7 1692 aa14.22□□□□□ -0.13
ECHDC3-203ENST00000422887 FAM135BQ49AJ0 1406 aa14.22□□□□□ -0.13
ECHDC3-203ENST00000422887 NBPF8Q3BBV2 869 aa14.21□□□□□ -0.13
ECHDC3-203ENST00000422887 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
ECHDC3-203ENST00000422887 ADGRL3Q9HAR2 1447 aa14.21□□□□□ -0.13
ECHDC3-203ENST00000422887 ZEB1P37275 1124 aaPredicted RBP14.2□□□□□ -0.14
ECHDC3-203ENST00000422887 AMOTL2Q9Y2J4 779 aa14.2□□□□□ -0.14
ECHDC3-203ENST00000422887 DCCP43146 1447 aa14.2□□□□□ -0.14
ECHDC3-203ENST00000422887 TMEM94Q12767 1356 aa14.2□□□□□ -0.14
ECHDC3-203ENST00000422887 EIF3AQ14152 1382 aaKnown RBP14.19□□□□□ -0.14
ECHDC3-203ENST00000422887 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
ECHDC3-203ENST00000422887 TMEM132EQ6IEE7 984 aa14.18□□□□□ -0.14
ECHDC3-203ENST00000422887 SIRT1Q96EB6 747 aa14.18□□□□□ -0.14
ECHDC3-203ENST00000422887 ITSN1Q15811 1721 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms