RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 COL17A1Q9UMD9 1497 aaPredicted RBP31.66■■■□□ 2.66
LSM8-203ENST00000422760 PPLO60437 1756 aa31.63■■■□□ 2.65
LSM8-203ENST00000422760 AGLP35573 1532 aa31.62■■■□□ 2.65
LSM8-203ENST00000422760 NRXN1Q9ULB1 1477 aa31.62■■■□□ 2.65
LSM8-203ENST00000422760 TESK2Q96S53 571 aa31.61■■■□□ 2.65
LSM8-203ENST00000422760 ARHGEF40Q8TER5 1519 aa31.6■■■□□ 2.65
LSM8-203ENST00000422760 SCAF11Q99590 1463 aaKnown RBP31.59■■■□□ 2.65
LSM8-203ENST00000422760 PREX1Q8TCU6 1659 aa31.58■■■□□ 2.65
LSM8-203ENST00000422760 ADGRF5Q8IZF2 1346 aa31.57■■■□□ 2.65
LSM8-203ENST00000422760 DISP3Q9P2K9 1392 aa31.57■■■□□ 2.64
LSM8-203ENST00000422760 CHGAP10645 457 aaKnown RBP31.57■■■□□ 2.64
LSM8-203ENST00000422760 FKBP8Q14318 412 aa31.55■■■□□ 2.64
LSM8-203ENST00000422760 CFAP70Q5T0N1 1121 aa31.49■■■□□ 2.63
LSM8-203ENST00000422760 TMF1P82094 1093 aa31.48■■■□□ 2.63
LSM8-203ENST00000422760 CCDC184Q52MB2 194 aa31.48■■■□□ 2.63
LSM8-203ENST00000422760 PIK3C2GO75747 1445 aa31.48■■■□□ 2.63
LSM8-203ENST00000422760 EIF3AQ14152 1382 aaKnown RBP31.48■■■□□ 2.63
LSM8-203ENST00000422760 CLTCQ00610 1675 aaKnown RBP31.48■■■□□ 2.63
LSM8-203ENST00000422760 RPGRIP1LQ68CZ1 1315 aa31.47■■■□□ 2.63
LSM8-203ENST00000422760 SETBP1Q9Y6X0 1596 aa31.46■■■□□ 2.63
LSM8-203ENST00000422760 NEXMIFQ5QGS0 1516 aa31.45■■■□□ 2.63
LSM8-203ENST00000422760 HNRNPUQ00839 825 aaKnown RBP eCLIP31.45■■■□□ 2.62
LSM8-203ENST00000422760 ERICH6BQ5W0A0 696 aa31.45■■■□□ 2.62
LSM8-203ENST00000422760 MYO5BQ9ULV0 1848 aa31.44■■■□□ 2.62
LSM8-203ENST00000422760 ERVK-7P63135 1459 aa31.43■■■□□ 2.62
LSM8-203ENST00000422760 TSHZ2Q9NRE2 1034 aa31.42■■■□□ 2.62
LSM8-203ENST00000422760 PPP6R1Q9UPN7 881 aa31.42■■■□□ 2.62
LSM8-203ENST00000422760 MRS2Q9HD23 443 aa31.41■■■□□ 2.62
LSM8-203ENST00000422760 SLC52A1Q9NWF4 448 aa31.41■■■□□ 2.62
LSM8-203ENST00000422760 IDI1Q13907 227 aa31.41■■■□□ 2.62
LSM8-203ENST00000422760 TMEM131LA2VDJ0 1609 aa31.4■■■□□ 2.62
LSM8-203ENST00000422760 MYO3AQ8NEV4 1616 aa31.39■■■□□ 2.62
LSM8-203ENST00000422760 CNGB1Q14028 1251 aaPredicted RBP31.37■■■□□ 2.61
LSM8-203ENST00000422760 ADGRB1O14514 1584 aa31.37■■■□□ 2.61
LSM8-203ENST00000422760 FBXO31Q5XUX0 539 aaPredicted RBP31.35■■■□□ 2.61
LSM8-203ENST00000422760 KTN1Q86UP2 1357 aaKnown RBP31.33■■■□□ 2.61
LSM8-203ENST00000422760 C14orf93Q9H972 538 aaKnown RBP31.33■■■□□ 2.61
LSM8-203ENST00000422760 SPATA31D1Q6ZQQ2 1576 aa31.32■■■□□ 2.6
LSM8-203ENST00000422760 KDM5AP29375 1690 aaKnown RBP31.31■■■□□ 2.6
LSM8-203ENST00000422760 ZBED9Q6R2W3 1325 aa31.31■■■□□ 2.6
LSM8-203ENST00000422760 MLECQ14165 292 aa31.31■■■□□ 2.6
LSM8-203ENST00000422760 MYOM1P52179 1685 aa31.3■■■□□ 2.6
LSM8-203ENST00000422760 PER1O15534 1290 aaPredicted RBP31.3■■■□□ 2.6
LSM8-203ENST00000422760 VGFO15240 615 aaPredicted RBP31.29■■■□□ 2.6
LSM8-203ENST00000422760 ZFYVE9O95405 1425 aa31.28■■■□□ 2.6
LSM8-203ENST00000422760 CDCA8Q53HL2 280 aa31.28■■■□□ 2.6
LSM8-203ENST00000422760 NUTM2DQ5VT03 806 aaPredicted RBP31.27■■■□□ 2.6
LSM8-203ENST00000422760 FAM9BQ8IZU0 186 aa31.26■■■□□ 2.6
LSM8-203ENST00000422760 RALBP1Q15311 655 aa31.26■■■□□ 2.59
LSM8-203ENST00000422760 PANK3Q9H999 370 aa31.26■■■□□ 2.59
LSM8-203ENST00000422760 SBNO2Q9Y2G9 1366 aa31.25■■■□□ 2.59
LSM8-203ENST00000422760 QRICH2Q9H0J4 1663 aa31.24■■■□□ 2.59
LSM8-203ENST00000422760 BCANQ96GW7 911 aa31.24■■■□□ 2.59
LSM8-203ENST00000422760 PARD3Q8TEW0 1356 aa31.24■■■□□ 2.59
LSM8-203ENST00000422760 MYBBP1AQ9BQG0 1328 aaKnown RBP31.22■■■□□ 2.59
LSM8-203ENST00000422760 SLC24A1O60721 1099 aa31.21■■■□□ 2.59
LSM8-203ENST00000422760 ARHGEF28Q8N1W1 1705 aaKnown RBP31.2■■■□□ 2.59
LSM8-203ENST00000422760 CENPJQ9HC77 1338 aaPredicted RBP31.2■■■□□ 2.58
LSM8-203ENST00000422760 TMEM132EQ6IEE7 984 aa31.2■■■□□ 2.58
LSM8-203ENST00000422760 TRAK1Q9UPV9 953 aa31.18■■■□□ 2.58
LSM8-203ENST00000422760 BRD4O60885 1362 aaPredicted RBP31.17■■■□□ 2.58
LSM8-203ENST00000422760 ASXL1Q8IXJ9 1541 aa31.17■■■□□ 2.58
LSM8-203ENST00000422760 ESF1Q9H501 851 aaKnown RBP31.15■■■□□ 2.58
LSM8-203ENST00000422760 A2ML1A8K2U0 1454 aa31.14■■■□□ 2.58
LSM8-203ENST00000422760 ZMYM3Q14202 1370 aa31.14■■■□□ 2.58
LSM8-203ENST00000422760 TMC1Q8TDI8 760 aa31.13■■■□□ 2.57
LSM8-203ENST00000422760 STAG3Q9UJ98 1225 aa31.12■■■□□ 2.57
LSM8-203ENST00000422760 CC2D1BQ5T0F9 858 aaKnown RBP31.11■■■□□ 2.57
LSM8-203ENST00000422760 NLRP13Q86W25 1043 aa31.08■■■□□ 2.57
LSM8-203ENST00000422760 PNISRQ8TF01 805 aaKnown RBP31.08■■■□□ 2.57
LSM8-203ENST00000422760 KNSTRNQ9Y448 316 aa31.06■■■□□ 2.56
LSM8-203ENST00000422760 ALKQ9UM73 1620 aa31.05■■■□□ 2.56
LSM8-203ENST00000422760 TRHP20396 242 aaPredicted RBP31.04■■■□□ 2.56
LSM8-203ENST00000422760 SENP3Q9H4L4 574 aaPredicted RBP31.04■■■□□ 2.56
LSM8-203ENST00000422760 PPP4R2Q9NY27 417 aa31.03■■■□□ 2.56
LSM8-203ENST00000422760 SMG6Q86US8 1419 aaKnown RBP31.03■■■□□ 2.56
LSM8-203ENST00000422760 RIMS2Q9UQ26 1411 aa31.02■■■□□ 2.56
LSM8-203ENST00000422760 LRPPRCP42704 1394 aaKnown RBP31.02■■■□□ 2.56
LSM8-203ENST00000422760 AMER1Q5JTC6 1135 aaPredicted RBP31.01■■■□□ 2.55
LSM8-203ENST00000422760 TULP4Q9NRJ4 1543 aa31■■■□□ 2.55
LSM8-203ENST00000422760 TNRQ92752 1358 aa30.99■■■□□ 2.55
LSM8-203ENST00000422760 SETD1AO15047 1707 aaKnown RBP30.98■■■□□ 2.55
LSM8-203ENST00000422760 PTPRMP28827 1452 aa30.98■■■□□ 2.55
LSM8-203ENST00000422760 YTHDC2Q9H6S0 1430 aaKnown RBP30.98■■■□□ 2.55
LSM8-203ENST00000422760 NPC1L1Q9UHC9 1359 aa30.97■■■□□ 2.55
LSM8-203ENST00000422760 UBR1Q8IWV7 1749 aa30.94■■■□□ 2.54
LSM8-203ENST00000422760 STK26Q9P289 416 aa30.94■■■□□ 2.54
LSM8-203ENST00000422760 NRXN3Q9Y4C0 1643 aa30.93■■■□□ 2.54
LSM8-203ENST00000422760 FER1L4A9Z1Z3 1794 aa30.92■■■□□ 2.54
LSM8-203ENST00000422760 EVC2Q86UK5 1308 aa30.9■■■□□ 2.54
LSM8-203ENST00000422760 RBM19Q9Y4C8 960 aaKnown RBP30.9■■■□□ 2.54
LSM8-203ENST00000422760 C3P01024 1663 aa30.89■■■□□ 2.54
LSM8-203ENST00000422760 CARD14Q9BXL6 1004 aa30.88■■■□□ 2.53
LSM8-203ENST00000422760 SAFB2Q14151 953 aaKnown RBP eCLIP30.87■■■□□ 2.53
LSM8-203ENST00000422760 NUDCQ9Y266 331 aa30.87■■■□□ 2.53
LSM8-203ENST00000422760 PUS7Q96PZ0 661 aaKnown RBP30.86■■■□□ 2.53
LSM8-203ENST00000422760 INSRP06213 1382 aa30.86■■■□□ 2.53
LSM8-203ENST00000422760 PPP2R1AP30153 589 aa30.85■■■□□ 2.53
LSM8-203ENST00000422760 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.85■■■□□ 2.53
LSM8-203ENST00000422760 RNF123Q5XPI4 1314 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms