RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.23
PDGFC-202ENST00000422544 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.24
PDGFC-202ENST00000422544 TXNDC2Q86VQ3 553 aa13.57□□□□□ -0.24
PDGFC-202ENST00000422544 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
PDGFC-202ENST00000422544 TRPM2O94759 1503 aa13.57□□□□□ -0.24
PDGFC-202ENST00000422544 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
PDGFC-202ENST00000422544 LTKP29376 864 aa13.56□□□□□ -0.24
PDGFC-202ENST00000422544 ZNF326Q5BKZ1 582 aaKnown RBP13.56□□□□□ -0.24
PDGFC-202ENST00000422544 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
PDGFC-202ENST00000422544 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
PDGFC-202ENST00000422544 SPHKAPQ2M3C7 1700 aa13.56□□□□□ -0.24
PDGFC-202ENST00000422544 MED14O60244 1454 aa13.55□□□□□ -0.24
PDGFC-202ENST00000422544 PIP4K2BP78356 416 aa13.55□□□□□ -0.24
PDGFC-202ENST00000422544 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
PDGFC-202ENST00000422544 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
PDGFC-202ENST00000422544 CLTCL1P53675 1640 aa13.54□□□□□ -0.24
PDGFC-202ENST00000422544 IQGAP1P46940 1657 aa13.54□□□□□ -0.24
PDGFC-202ENST00000422544 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
PDGFC-202ENST00000422544 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
PDGFC-202ENST00000422544 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
PDGFC-202ENST00000422544 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
PDGFC-202ENST00000422544 UBR1Q8IWV7 1749 aa13.53□□□□□ -0.24
PDGFC-202ENST00000422544 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.25
PDGFC-202ENST00000422544 TMEM131LA2VDJ0 1609 aa13.52□□□□□ -0.25
PDGFC-202ENST00000422544 ARHGAP23Q9P227 1491 aa13.51□□□□□ -0.25
PDGFC-202ENST00000422544 RIMS2Q9UQ26 1411 aa13.51□□□□□ -0.25
PDGFC-202ENST00000422544 PPP1R15AO75807 674 aaPredicted RBP13.51□□□□□ -0.25
PDGFC-202ENST00000422544 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDGFC-202ENST00000422544 SLIT1O75093 1534 aa13.5□□□□□ -0.25
PDGFC-202ENST00000422544 NEUROD1Q13562 356 aa13.5□□□□□ -0.25
PDGFC-202ENST00000422544 SPATA31E1Q6ZUB1 1445 aa13.49□□□□□ -0.25
PDGFC-202ENST00000422544 BCANQ96GW7 911 aa13.49□□□□□ -0.25
PDGFC-202ENST00000422544 SCAF11Q99590 1463 aaKnown RBP13.48□□□□□ -0.25
PDGFC-202ENST00000422544 ZFYVE9O95405 1425 aa13.48□□□□□ -0.25
PDGFC-202ENST00000422544 SETD1AO15047 1707 aaKnown RBP13.48□□□□□ -0.25
PDGFC-202ENST00000422544 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
PDGFC-202ENST00000422544 RPGRIP1LQ68CZ1 1315 aa13.48□□□□□ -0.25
PDGFC-202ENST00000422544 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
PDGFC-202ENST00000422544 TOM1O60784 492 aa13.48□□□□□ -0.25
PDGFC-202ENST00000422544 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
PDGFC-202ENST00000422544 KDM5AP29375 1690 aaKnown RBP13.47□□□□□ -0.25
PDGFC-202ENST00000422544 VGFO15240 615 aaPredicted RBP13.46□□□□□ -0.25
PDGFC-202ENST00000422544 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
PDGFC-202ENST00000422544 SLC26A8Q96RN1 970 aa13.45□□□□□ -0.26
PDGFC-202ENST00000422544 MYO5BQ9ULV0 1848 aa13.44□□□□□ -0.26
PDGFC-202ENST00000422544 DCAF11Q8TEB1 546 aa13.44□□□□□ -0.26
PDGFC-202ENST00000422544 KDM2AQ9Y2K7 1162 aa13.44□□□□□ -0.26
PDGFC-202ENST00000422544 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
PDGFC-202ENST00000422544 KIF1BO60333 1816 aa13.43□□□□□ -0.26
PDGFC-202ENST00000422544 ADGRF5Q8IZF2 1346 aa13.43□□□□□ -0.26
PDGFC-202ENST00000422544 POTEAQ6S8J7 498 aa13.42□□□□□ -0.26
PDGFC-202ENST00000422544 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
PDGFC-202ENST00000422544 L3MBTL2Q969R5 705 aa13.41□□□□□ -0.26
PDGFC-202ENST00000422544 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
PDGFC-202ENST00000422544 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
PDGFC-202ENST00000422544 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
PDGFC-202ENST00000422544 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
PDGFC-202ENST00000422544 CFAP70Q5T0N1 1121 aa13.36□□□□□ -0.27
PDGFC-202ENST00000422544 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
PDGFC-202ENST00000422544 METP08581 1390 aa13.35□□□□□ -0.27
PDGFC-202ENST00000422544 TONSLQ96HA7 1378 aa13.35□□□□□ -0.27
PDGFC-202ENST00000422544 KCNA6P17658 529 aa13.35□□□□□ -0.27
PDGFC-202ENST00000422544 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
PDGFC-202ENST00000422544 TMEM132EQ6IEE7 984 aa13.34□□□□□ -0.27
PDGFC-202ENST00000422544 PPLO60437 1756 aa13.34□□□□□ -0.27
PDGFC-202ENST00000422544 MYOM2P54296 1465 aa13.34□□□□□ -0.27
PDGFC-202ENST00000422544 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
PDGFC-202ENST00000422544 PIK3C2GO75747 1445 aa13.33□□□□□ -0.28
PDGFC-202ENST00000422544 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.28
PDGFC-202ENST00000422544 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.28
PDGFC-202ENST00000422544 FAM135BQ49AJ0 1406 aa13.31□□□□□ -0.28
PDGFC-202ENST00000422544 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
PDGFC-202ENST00000422544 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
PDGFC-202ENST00000422544 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
PDGFC-202ENST00000422544 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
PDGFC-202ENST00000422544 NBPF8Q3BBV2 869 aa13.3□□□□□ -0.28
PDGFC-202ENST00000422544 PROSER2Q86WR7 435 aaPredicted RBP13.3□□□□□ -0.28
PDGFC-202ENST00000422544 STK26Q9P289 416 aa13.3□□□□□ -0.28
PDGFC-202ENST00000422544 IFT172Q9UG01 1749 aa13.3□□□□□ -0.28
PDGFC-202ENST00000422544 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
PDGFC-202ENST00000422544 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
PDGFC-202ENST00000422544 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
PDGFC-202ENST00000422544 NBPF1Q3BBV0 1214 aa13.28□□□□□ -0.28
PDGFC-202ENST00000422544 NWD1Q149M9 1564 aa13.27□□□□□ -0.29
PDGFC-202ENST00000422544 COL16A1Q07092 1604 aaPredicted RBP13.27□□□□□ -0.29
PDGFC-202ENST00000422544 PHLPP1O60346 1717 aa13.27□□□□□ -0.29
PDGFC-202ENST00000422544 CHD2O14647 1828 aaKnown RBP13.26□□□□□ -0.29
PDGFC-202ENST00000422544 LRP6O75581 1613 aa13.25□□□□□ -0.29
PDGFC-202ENST00000422544 LRPPRCP42704 1394 aaKnown RBP13.25□□□□□ -0.29
PDGFC-202ENST00000422544 TMEM94Q12767 1356 aa13.25□□□□□ -0.29
PDGFC-202ENST00000422544 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
PDGFC-202ENST00000422544 YTHDC2Q9H6S0 1430 aaKnown RBP13.24□□□□□ -0.29
PDGFC-202ENST00000422544 ABCC11Q96J66 1382 aa13.24□□□□□ -0.29
PDGFC-202ENST00000422544 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
PDGFC-202ENST00000422544 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
PDGFC-202ENST00000422544 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
PDGFC-202ENST00000422544 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
PDGFC-202ENST00000422544 NKTRP30414 1462 aaKnown RBP13.22□□□□□ -0.29
PDGFC-202ENST00000422544 ROCK2O75116 1388 aaKnown RBP13.21□□□□□ -0.29
PDGFC-202ENST00000422544 ADGRB1O14514 1584 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms