RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 LTKP29376 864 aa12.54□□□□□ -0.4
TRIM43CP-201ENST00000422468 IDI1Q13907 227 aa12.54□□□□□ -0.4
TRIM43CP-201ENST00000422468 TXNDC2Q86VQ3 553 aa12.54□□□□□ -0.4
TRIM43CP-201ENST00000422468 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
TRIM43CP-201ENST00000422468 EID1Q9Y6B2 187 aa12.54□□□□□ -0.4
TRIM43CP-201ENST00000422468 TMEM2Q9UHN6 1383 aa12.53□□□□□ -0.4
TRIM43CP-201ENST00000422468 ADGRB3O60242 1522 aa12.52□□□□□ -0.4
TRIM43CP-201ENST00000422468 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
TRIM43CP-201ENST00000422468 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
TRIM43CP-201ENST00000422468 MYO5BQ9ULV0 1848 aa12.52□□□□□ -0.41
TRIM43CP-201ENST00000422468 ITGAEP38570 1179 aa12.51□□□□□ -0.41
TRIM43CP-201ENST00000422468 E9PCH4 1651 aa12.51□□□□□ -0.41
TRIM43CP-201ENST00000422468 TOM1O60784 492 aa12.5□□□□□ -0.41
TRIM43CP-201ENST00000422468 LRRC7Q96NW7 1537 aa12.5□□□□□ -0.41
TRIM43CP-201ENST00000422468 XIRP1Q702N8 1843 aaKnown RBP12.48□□□□□ -0.41
TRIM43CP-201ENST00000422468 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
TRIM43CP-201ENST00000422468 NAIPQ13075 1403 aa12.47□□□□□ -0.41
TRIM43CP-201ENST00000422468 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
TRIM43CP-201ENST00000422468 ILDR2Q71H61 639 aa12.47□□□□□ -0.41
TRIM43CP-201ENST00000422468 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
TRIM43CP-201ENST00000422468 NUP155O75694 1391 aa12.46□□□□□ -0.41
TRIM43CP-201ENST00000422468 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.41
TRIM43CP-201ENST00000422468 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
TRIM43CP-201ENST00000422468 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
TRIM43CP-201ENST00000422468 SLC26A8Q96RN1 970 aa12.43□□□□□ -0.42
TRIM43CP-201ENST00000422468 RIMS2Q9UQ26 1411 aa12.43□□□□□ -0.42
TRIM43CP-201ENST00000422468 SPHKAPQ2M3C7 1700 aa12.42□□□□□ -0.42
TRIM43CP-201ENST00000422468 HSPA1LP34931 641 aa12.42□□□□□ -0.42
TRIM43CP-201ENST00000422468 NWD1Q149M9 1564 aa12.42□□□□□ -0.42
TRIM43CP-201ENST00000422468 PLEKHG1Q9ULL1 1385 aa12.42□□□□□ -0.42
TRIM43CP-201ENST00000422468 CHD2O14647 1828 aaKnown RBP12.41□□□□□ -0.42
TRIM43CP-201ENST00000422468 KCNA6P17658 529 aa12.41□□□□□ -0.42
TRIM43CP-201ENST00000422468 BCANQ96GW7 911 aa12.41□□□□□ -0.42
TRIM43CP-201ENST00000422468 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
TRIM43CP-201ENST00000422468 HFM1A2PYH4 1435 aa12.4□□□□□ -0.42
TRIM43CP-201ENST00000422468 PPP1R15AO75807 674 aaPredicted RBP12.4□□□□□ -0.42
TRIM43CP-201ENST00000422468 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
TRIM43CP-201ENST00000422468 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRIM43CP-201ENST00000422468 ATXN8OSP0DMR3 200 aa12.39□□□□□ -0.43
TRIM43CP-201ENST00000422468 NKTRP30414 1462 aaKnown RBP12.39□□□□□ -0.43
TRIM43CP-201ENST00000422468 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
TRIM43CP-201ENST00000422468 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
TRIM43CP-201ENST00000422468 DIP2AQ14689 1571 aa12.37□□□□□ -0.43
TRIM43CP-201ENST00000422468 TBX22Q9Y458 520 aa12.36□□□□□ -0.43
TRIM43CP-201ENST00000422468 KIF1BO60333 1816 aa12.35□□□□□ -0.43
TRIM43CP-201ENST00000422468 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
TRIM43CP-201ENST00000422468 CLTCL1P53675 1640 aa12.35□□□□□ -0.43
TRIM43CP-201ENST00000422468 TRPM2O94759 1503 aa12.35□□□□□ -0.43
TRIM43CP-201ENST00000422468 ADAMTS13Q76LX8 1427 aa12.35□□□□□ -0.43
TRIM43CP-201ENST00000422468 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
TRIM43CP-201ENST00000422468 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
TRIM43CP-201ENST00000422468 SOCS7O14512 581 aa12.33□□□□□ -0.44
TRIM43CP-201ENST00000422468 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
TRIM43CP-201ENST00000422468 RBM33Q96EV2 1170 aaKnown RBP12.33□□□□□ -0.44
TRIM43CP-201ENST00000422468 FAM135BQ49AJ0 1406 aa12.33□□□□□ -0.44
TRIM43CP-201ENST00000422468 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
TRIM43CP-201ENST00000422468 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
TRIM43CP-201ENST00000422468 NRXN3Q9Y4C0 1643 aa12.32□□□□□ -0.44
TRIM43CP-201ENST00000422468 MSH6P52701 1360 aa12.31□□□□□ -0.44
TRIM43CP-201ENST00000422468 SETBP1Q9Y6X0 1596 aa12.31□□□□□ -0.44
TRIM43CP-201ENST00000422468 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
TRIM43CP-201ENST00000422468 TRIM52Q96A61 297 aa12.31□□□□□ -0.44
TRIM43CP-201ENST00000422468 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
TRIM43CP-201ENST00000422468 NEXMIFQ5QGS0 1516 aa12.3□□□□□ -0.44
TRIM43CP-201ENST00000422468 SLAIN2Q9P270 581 aa12.28□□□□□ -0.44
TRIM43CP-201ENST00000422468 XRN1Q8IZH2 1706 aaKnown RBP12.28□□□□□ -0.44
TRIM43CP-201ENST00000422468 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.28□□□□□ -0.44
TRIM43CP-201ENST00000422468 PTPRUQ92729 1446 aa12.28□□□□□ -0.44
TRIM43CP-201ENST00000422468 AMOTL2Q9Y2J4 779 aa12.27□□□□□ -0.45
TRIM43CP-201ENST00000422468 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
TRIM43CP-201ENST00000422468 C14orf37Q86TY3 774 aa12.26□□□□□ -0.45
TRIM43CP-201ENST00000422468 C19orf44Q9H6X5 657 aa12.25□□□□□ -0.45
TRIM43CP-201ENST00000422468 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
TRIM43CP-201ENST00000422468 PPLO60437 1756 aa12.25□□□□□ -0.45
TRIM43CP-201ENST00000422468 METP08581 1390 aa12.24□□□□□ -0.45
TRIM43CP-201ENST00000422468 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
TRIM43CP-201ENST00000422468 ATF3P18847 181 aa12.23□□□□□ -0.45
TRIM43CP-201ENST00000422468 CADPS2Q86UW7 1296 aa12.23□□□□□ -0.45
TRIM43CP-201ENST00000422468 SETD5Q9C0A6 1442 aa12.22□□□□□ -0.45
TRIM43CP-201ENST00000422468 RPGRIP1LQ68CZ1 1315 aa12.22□□□□□ -0.45
TRIM43CP-201ENST00000422468 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
TRIM43CP-201ENST00000422468 DCCP43146 1447 aa12.21□□□□□ -0.45
TRIM43CP-201ENST00000422468 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
TRIM43CP-201ENST00000422468 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
TRIM43CP-201ENST00000422468 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
TRIM43CP-201ENST00000422468 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
TRIM43CP-201ENST00000422468 CCDC144AA2RUR9 1427 aa12.2□□□□□ -0.46
TRIM43CP-201ENST00000422468 AHDC1Q5TGY3 1603 aaPredicted RBP12.19□□□□□ -0.46
TRIM43CP-201ENST00000422468 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
TRIM43CP-201ENST00000422468 NALCNQ8IZF0 1738 aa12.19□□□□□ -0.46
TRIM43CP-201ENST00000422468 IFT172Q9UG01 1749 aa12.19□□□□□ -0.46
TRIM43CP-201ENST00000422468 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
TRIM43CP-201ENST00000422468 JCADQ9P266 1359 aa12.18□□□□□ -0.46
TRIM43CP-201ENST00000422468 PTCH1Q13635 1447 aa12.17□□□□□ -0.46
TRIM43CP-201ENST00000422468 ADGRL3Q9HAR2 1447 aa12.17□□□□□ -0.46
TRIM43CP-201ENST00000422468 BRINP3Q76B58 766 aa12.16□□□□□ -0.46
TRIM43CP-201ENST00000422468 RGS17Q9UGC6 210 aaPredicted RBP12.16□□□□□ -0.46
TRIM43CP-201ENST00000422468 MST1RQ04912 1400 aa12.16□□□□□ -0.46
TRIM43CP-201ENST00000422468 PRAG1Q86YV5 1406 aa12.16□□□□□ -0.46
TRIM43CP-201ENST00000422468 ASXL1Q8IXJ9 1541 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms