RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 TEX14Q8IWB6 1497 aa9.69□□□□□ -0.86
CCR9-204ENST00000422395 ARHGAP33O14559 1287 aa9.69□□□□□ -0.86
CCR9-204ENST00000422395 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
CCR9-204ENST00000422395 WDR7Q9Y4E6 1490 aa9.68□□□□□ -0.86
CCR9-204ENST00000422395 CFAP43Q8NDM7 1665 aa9.68□□□□□ -0.86
CCR9-204ENST00000422395 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
CCR9-204ENST00000422395 KDM4FA0A1W2PPD8 638 aa9.66□□□□□ -0.86
CCR9-204ENST00000422395 ABCA8O94911 1581 aa9.66□□□□□ -0.86
CCR9-204ENST00000422395 TBC1D12O60347 775 aa9.65□□□□□ -0.86
CCR9-204ENST00000422395 CDK11AQ9UQ88 783 aaPredicted RBP9.65□□□□□ -0.86
CCR9-204ENST00000422395 ADGRL1O94910 1474 aa9.65□□□□□ -0.86
CCR9-204ENST00000422395 PRXQ9BXM0 1461 aa9.64□□□□□ -0.87
CCR9-204ENST00000422395 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
CCR9-204ENST00000422395 PPP4R3BQ5MIZ7 849 aa9.63□□□□□ -0.87
CCR9-204ENST00000422395 COL17A1Q9UMD9 1497 aaPredicted RBP9.63□□□□□ -0.87
CCR9-204ENST00000422395 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
CCR9-204ENST00000422395 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
CCR9-204ENST00000422395 TK2O00142 265 aa9.6□□□□□ -0.87
CCR9-204ENST00000422395 MAP3K1Q13233 1512 aa9.6□□□□□ -0.87
CCR9-204ENST00000422395 SAMD9Q5K651 1589 aa9.6□□□□□ -0.87
CCR9-204ENST00000422395 ANP32CO43423 234 aa9.59□□□□□ -0.87
CCR9-204ENST00000422395 PLPP6Q8IY26 295 aa9.59□□□□□ -0.87
CCR9-204ENST00000422395 CD109Q6YHK3 1445 aa9.59□□□□□ -0.87
CCR9-204ENST00000422395 PPP1R37O75864 691 aa9.58□□□□□ -0.88
CCR9-204ENST00000422395 PTCD2Q8WV60 388 aaKnown RBP9.58□□□□□ -0.88
CCR9-204ENST00000422395 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
CCR9-204ENST00000422395 CCNB3Q8WWL7 1395 aa9.58□□□□□ -0.88
CCR9-204ENST00000422395 PSEN2P49810 448 aa9.57□□□□□ -0.88
CCR9-204ENST00000422395 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
CCR9-204ENST00000422395 RAPGEF6Q8TEU7 1601 aa9.57□□□□□ -0.88
CCR9-204ENST00000422395 ABCA9Q8IUA7 1624 aa9.57□□□□□ -0.88
CCR9-204ENST00000422395 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
CCR9-204ENST00000422395 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
CCR9-204ENST00000422395 HECW2Q9P2P5 1572 aa9.56□□□□□ -0.88
CCR9-204ENST00000422395 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
CCR9-204ENST00000422395 FOXK1P85037 733 aa9.56□□□□□ -0.88
CCR9-204ENST00000422395 KCNK17Q96T54 332 aa9.56□□□□□ -0.88
CCR9-204ENST00000422395 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
CCR9-204ENST00000422395 DMRTA1Q5VZB9 504 aa9.55□□□□□ -0.88
CCR9-204ENST00000422395 ATP10BO94823 1461 aa9.54□□□□□ -0.88
CCR9-204ENST00000422395 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
CCR9-204ENST00000422395 BCANQ96GW7 911 aa9.54□□□□□ -0.88
CCR9-204ENST00000422395 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
CCR9-204ENST00000422395 ARAP3Q8WWN8 1544 aa9.53□□□□□ -0.88
CCR9-204ENST00000422395 SETD5Q9C0A6 1442 aa9.52□□□□□ -0.89
CCR9-204ENST00000422395 PPP4R2Q9NY27 417 aa9.52□□□□□ -0.89
CCR9-204ENST00000422395 GOLGA8CPA6NN73 597 aa9.51□□□□□ -0.89
CCR9-204ENST00000422395 HAP1P54257 671 aaPredicted RBP9.51□□□□□ -0.89
CCR9-204ENST00000422395 DSG2Q14126 1118 aa9.51□□□□□ -0.89
CCR9-204ENST00000422395 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.51□□□□□ -0.89
CCR9-204ENST00000422395 NUP153P49790 1475 aaKnown RBP9.5□□□□□ -0.89
CCR9-204ENST00000422395 HRO43593 1189 aa9.5□□□□□ -0.89
CCR9-204ENST00000422395 DEKP35659 375 aaKnown RBP9.5□□□□□ -0.89
CCR9-204ENST00000422395 PTPN5P54829 565 aa9.5□□□□□ -0.89
CCR9-204ENST00000422395 PAXIP1Q6ZW49 1069 aaPredicted RBP9.5□□□□□ -0.89
CCR9-204ENST00000422395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCR9-204ENST00000422395 EFCAB5A4FU69 1503 aa9.49□□□□□ -0.89
CCR9-204ENST00000422395 NEO1Q92859 1461 aa9.49□□□□□ -0.89
CCR9-204ENST00000422395 FHOD3Q2V2M9 1422 aa9.49□□□□□ -0.89
CCR9-204ENST00000422395 FRMPD1Q5SYB0 1578 aa9.49□□□□□ -0.89
CCR9-204ENST00000422395 ZNF454Q8N9F8 522 aa9.49□□□□□ -0.89
CCR9-204ENST00000422395 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCR9-204ENST00000422395 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
CCR9-204ENST00000422395 CFAP74Q9C0B2 1584 aa9.49□□□□□ -0.89
CCR9-204ENST00000422395 PHLDB1Q86UU1 1377 aa9.48□□□□□ -0.89
CCR9-204ENST00000422395 RAB3GAP2Q9H2M9 1393 aa9.48□□□□□ -0.89
CCR9-204ENST00000422395 RANGAP1P46060 587 aaPredicted RBP9.48□□□□□ -0.89
CCR9-204ENST00000422395 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
CCR9-204ENST00000422395 RYDENQ9NUL5 291 aaKnown RBP9.48□□□□□ -0.89
CCR9-204ENST00000422395 RICTORQ6R327 1708 aa9.47□□□□□ -0.89
CCR9-204ENST00000422395 ADAMTSL3P82987 1691 aa9.47□□□□□ -0.89
CCR9-204ENST00000422395 DDX10Q13206 875 aaKnown RBP9.47□□□□□ -0.89
CCR9-204ENST00000422395 ARHGEF40Q8TER5 1519 aa9.46□□□□□ -0.89
CCR9-204ENST00000422395 BCORL1Q5H9F3 1711 aa9.46□□□□□ -0.9
CCR9-204ENST00000422395 TTC37Q6PGP7 1564 aa9.46□□□□□ -0.9
CCR9-204ENST00000422395 RTL5Q5HYW3 569 aaPredicted RBP9.45□□□□□ -0.9
CCR9-204ENST00000422395 NOP58Q9Y2X3 529 aaKnown RBP9.45□□□□□ -0.9
CCR9-204ENST00000422395 MADDQ8WXG6 1647 aa9.45□□□□□ -0.9
CCR9-204ENST00000422395 RAPGEF3O95398 923 aa9.44□□□□□ -0.9
CCR9-204ENST00000422395 VPS9D1Q9Y2B5 631 aa9.44□□□□□ -0.9
CCR9-204ENST00000422395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCR9-204ENST00000422395 PTPREP23469 700 aa9.43□□□□□ -0.9
CCR9-204ENST00000422395 SPRYD3Q8NCJ5 442 aa9.43□□□□□ -0.9
CCR9-204ENST00000422395 RIMS1Q86UR5 1692 aaKnown RBP9.43□□□□□ -0.9
CCR9-204ENST00000422395 FANCAO15360 1455 aa9.42□□□□□ -0.9
CCR9-204ENST00000422395 PTPRMP28827 1452 aa9.42□□□□□ -0.9
CCR9-204ENST00000422395 MYO5CQ9NQX4 1742 aa9.42□□□□□ -0.9
CCR9-204ENST00000422395 HECW1Q76N89 1606 aa9.42□□□□□ -0.9
CCR9-204ENST00000422395 CDK13Q14004 1512 aaKnown RBP9.42□□□□□ -0.9
CCR9-204ENST00000422395 USP35Q9P2H5 1018 aa9.42□□□□□ -0.9
CCR9-204ENST00000422395 DENND4BO75064 1496 aaPredicted RBP9.42□□□□□ -0.9
CCR9-204ENST00000422395 ZMYM4Q5VZL5 1548 aa9.41□□□□□ -0.9
CCR9-204ENST00000422395 PLEKHD1A6NEE1 506 aa9.41□□□□□ -0.9
CCR9-204ENST00000422395 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
CCR9-204ENST00000422395 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
CCR9-204ENST00000422395 MRPL50Q8N5N7 158 aaKnown RBP9.41□□□□□ -0.9
CCR9-204ENST00000422395 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
CCR9-204ENST00000422395 ARID4BQ4LE39 1312 aaPredicted RBP9.41□□□□□ -0.9
CCR9-204ENST00000422395 ITGAEP38570 1179 aa9.4□□□□□ -0.9
CCR9-204ENST00000422395 KANK4Q5T7N3 995 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms