RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 RSPH4AQ5TD94 716 aa19.54■□□□□ 0.72
UFD1-203ENST00000421968 CCDC125Q86Z20 511 aa19.54■□□□□ 0.72
UFD1-203ENST00000421968 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
UFD1-203ENST00000421968 CADPS2Q86UW7 1296 aa19.53■□□□□ 0.72
UFD1-203ENST00000421968 TSPY4P0CV99 314 aa19.51■□□□□ 0.71
UFD1-203ENST00000421968 TSPY10P0CW01 314 aa19.51■□□□□ 0.71
UFD1-203ENST00000421968 ATF3P18847 181 aa19.51■□□□□ 0.71
UFD1-203ENST00000421968 EFCAB6Q5THR3 1501 aa19.51■□□□□ 0.71
UFD1-203ENST00000421968 BRINP3Q76B58 766 aa19.49■□□□□ 0.71
UFD1-203ENST00000421968 LRP5O75197 1615 aa19.49■□□□□ 0.71
UFD1-203ENST00000421968 NCOA3Q9Y6Q9 1424 aa19.48■□□□□ 0.71
UFD1-203ENST00000421968 MROH1Q8NDA8 1641 aa19.47■□□□□ 0.71
UFD1-203ENST00000421968 C19orf44Q9H6X5 657 aa19.47■□□□□ 0.71
UFD1-203ENST00000421968 CHD2O14647 1828 aaKnown RBP19.46■□□□□ 0.71
UFD1-203ENST00000421968 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.46■□□□□ 0.71
UFD1-203ENST00000421968 EP400Q96L91 3159 aa19.46■□□□□ 0.71
UFD1-203ENST00000421968 MAST1Q9Y2H9 1570 aa19.45■□□□□ 0.7
UFD1-203ENST00000421968 ARHGAP31Q2M1Z3 1444 aa19.45■□□□□ 0.7
UFD1-203ENST00000421968 SETD5Q9C0A6 1442 aa19.45■□□□□ 0.7
UFD1-203ENST00000421968 LRRC59Q96AG4 307 aaKnown RBP19.45■□□□□ 0.7
UFD1-203ENST00000421968 EIF2AK4Q9P2K8 1649 aaKnown RBP19.44■□□□□ 0.7
UFD1-203ENST00000421968 ADAMTS2O95450 1211 aa19.44■□□□□ 0.7
UFD1-203ENST00000421968 IDI1Q13907 227 aa19.44■□□□□ 0.7
UFD1-203ENST00000421968 USP21Q9UK80 565 aa19.43■□□□□ 0.7
UFD1-203ENST00000421968 TRPC5Q9UL62 973 aaPredicted RBP19.43■□□□□ 0.7
UFD1-203ENST00000421968 PNPLA6Q8IY17 1366 aa19.39■□□□□ 0.69
UFD1-203ENST00000421968 YY1P25490 414 aa19.38■□□□□ 0.69
UFD1-203ENST00000421968 ARHGEF5Q12774 1597 aa19.38■□□□□ 0.69
UFD1-203ENST00000421968 ASXL1Q8IXJ9 1541 aa19.37■□□□□ 0.69
UFD1-203ENST00000421968 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
UFD1-203ENST00000421968 DEFB132Q7Z7B7 95 aa19.37■□□□□ 0.69
UFD1-203ENST00000421968 IFFO2Q5TF58 517 aa19.36■□□□□ 0.69
UFD1-203ENST00000421968 EHBP1L1Q8N3D4 1523 aa19.35■□□□□ 0.69
UFD1-203ENST00000421968 PPP1R15AO75807 674 aaPredicted RBP19.35■□□□□ 0.69
UFD1-203ENST00000421968 BLMP54132 1417 aaPredicted RBP19.34■□□□□ 0.69
UFD1-203ENST00000421968 PLEKHG1Q9ULL1 1385 aa19.34■□□□□ 0.69
UFD1-203ENST00000421968 NHSL1Q5SYE7 1610 aa19.34■□□□□ 0.69
UFD1-203ENST00000421968 PSDA5PKW4 1024 aaPredicted RBP19.33■□□□□ 0.68
UFD1-203ENST00000421968 DDX17Q92841 729 aaKnown RBP19.33■□□□□ 0.68
UFD1-203ENST00000421968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.686e-6■□□□□ 11
UFD1-203ENST00000421968 TBX22Q9Y458 520 aa19.33■□□□□ 0.68
UFD1-203ENST00000421968 ATRNO75882 1429 aa19.33■□□□□ 0.68
UFD1-203ENST00000421968 ADGRB3O60242 1522 aa19.32■□□□□ 0.68
UFD1-203ENST00000421968 HRCP23327 699 aa19.31■□□□□ 0.68
UFD1-203ENST00000421968 SF3B2Q13435 895 aaKnown RBP19.31■□□□□ 0.68
UFD1-203ENST00000421968 FNBP4Q8N3X1 1017 aaPredicted RBP19.31■□□□□ 0.68
UFD1-203ENST00000421968 HDGFP51858 240 aaKnown RBP19.28■□□□□ 0.68
UFD1-203ENST00000421968 DUOX2Q9NRD8 1548 aa19.27■□□□□ 0.68
UFD1-203ENST00000421968 ZFYVE9O95405 1425 aa19.26■□□□□ 0.67
UFD1-203ENST00000421968 DCCP43146 1447 aa19.26■□□□□ 0.67
UFD1-203ENST00000421968 MST1RQ04912 1400 aa19.26■□□□□ 0.67
UFD1-203ENST00000421968 KANK1Q14678 1352 aa19.25■□□□□ 0.67
UFD1-203ENST00000421968 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
UFD1-203ENST00000421968 RIMS2Q9UQ26 1411 aa19.25■□□□□ 0.67
UFD1-203ENST00000421968 GJD4Q96KN9 370 aaPredicted RBP19.23■□□□□ 0.67
UFD1-203ENST00000421968 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
UFD1-203ENST00000421968 PTCH1Q13635 1447 aa19.23■□□□□ 0.67
UFD1-203ENST00000421968 PIK3R4Q99570 1358 aa19.22■□□□□ 0.67
UFD1-203ENST00000421968 NOS1P29475 1434 aa19.21■□□□□ 0.67
UFD1-203ENST00000421968 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
UFD1-203ENST00000421968 ADAMTS13Q76LX8 1427 aa19.2■□□□□ 0.66
UFD1-203ENST00000421968 BCL9LQ86UU0 1499 aa19.2■□□□□ 0.66
UFD1-203ENST00000421968 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.18■□□□□ 0.66
UFD1-203ENST00000421968 KIF15Q9NS87 1388 aa19.18■□□□□ 0.66
UFD1-203ENST00000421968 ERBINQ96RT1 1412 aa19.17■□□□□ 0.66
UFD1-203ENST00000421968 UNC13BO14795 1591 aa19.15■□□□□ 0.66
UFD1-203ENST00000421968 RRP7BPQ9NSQ0 103 aa19.15■□□□□ 0.66
UFD1-203ENST00000421968 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
UFD1-203ENST00000421968 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
UFD1-203ENST00000421968 TRPM2O94759 1503 aa19.14■□□□□ 0.65
UFD1-203ENST00000421968 BAG6P46379 1132 aa19.13■□□□□ 0.65
UFD1-203ENST00000421968 GCC2Q8IWJ2 1684 aa19.13■□□□□ 0.65
UFD1-203ENST00000421968 BRWD3Q6RI45 1802 aa19.13■□□□□ 0.65
UFD1-203ENST00000421968 SENP3-EIF4A1A0A087X0R7 540 aa19.12■□□□□ 0.65
UFD1-203ENST00000421968 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
UFD1-203ENST00000421968 R3HDM1Q15032 1099 aaKnown RBP19.12■□□□□ 0.65
UFD1-203ENST00000421968 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
UFD1-203ENST00000421968 RALGAPBQ86X10 1494 aa19.09■□□□□ 0.65
UFD1-203ENST00000421968 TMEM131LA2VDJ0 1609 aa19.09■□□□□ 0.65
UFD1-203ENST00000421968 SPHKAPQ2M3C7 1700 aa19.08■□□□□ 0.65
UFD1-203ENST00000421968 GLI3P10071 1580 aa19.08■□□□□ 0.65
UFD1-203ENST00000421968 SEPT12Q8IYM1 358 aa19.08■□□□□ 0.64
UFD1-203ENST00000421968 C1orf167Q5SNV9 1468 aa19.06■□□□□ 0.64
UFD1-203ENST00000421968 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
UFD1-203ENST00000421968 LAMC1P11047 1609 aa19.06■□□□□ 0.64
UFD1-203ENST00000421968 COL22A1Q8NFW1 1626 aaPredicted RBP19.06■□□□□ 0.64
UFD1-203ENST00000421968 ADGRL3Q9HAR2 1447 aa19.06■□□□□ 0.64
UFD1-203ENST00000421968 MYOM2P54296 1465 aa19.05■□□□□ 0.64
UFD1-203ENST00000421968 UNC5CLQ8IV45 518 aa19.05■□□□□ 0.64
UFD1-203ENST00000421968 MYOM3Q5VTT5 1437 aa19.05■□□□□ 0.64
UFD1-203ENST00000421968 MARF1Q9Y4F3 1742 aaKnown RBP19.05■□□□□ 0.64
UFD1-203ENST00000421968 KRT27Q7Z3Y8 459 aa19.04■□□□□ 0.64
UFD1-203ENST00000421968 XRN1Q8IZH2 1706 aaKnown RBP19.04■□□□□ 0.64
UFD1-203ENST00000421968 ORAI2Q96SN7 254 aa19.04■□□□□ 0.64
UFD1-203ENST00000421968 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
UFD1-203ENST00000421968 EN1Q05925 392 aaPredicted RBP19.03■□□□□ 0.64
UFD1-203ENST00000421968 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
UFD1-203ENST00000421968 NALCNQ8IZF0 1738 aa19■□□□□ 0.63
UFD1-203ENST00000421968 ZNF784Q8NCA9 323 aaPredicted RBP18.97■□□□□ 0.63
UFD1-203ENST00000421968 SLIT2O94813 1529 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms