RNA–Protein interactions for RNA: ENST00000421234.5

LINC00475-204, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-204ENST00000421234 TET3O43151 1660 aa19.68■□□□□ 0.74
LINC00475-204ENST00000421234 GCC2Q8IWJ2 1684 aa19.68■□□□□ 0.74
LINC00475-204ENST00000421234 RRBP1Q9P2E9 1410 aaKnown RBP19.67■□□□□ 0.74
LINC00475-204ENST00000421234 NEURL4Q96JN8 1562 aa19.66■□□□□ 0.74
LINC00475-204ENST00000421234 PIK3C2BO00750 1634 aa19.65■□□□□ 0.74
LINC00475-204ENST00000421234 ANKLE2Q86XL3 938 aa19.64■□□□□ 0.73
LINC00475-204ENST00000421234 IQGAP1P46940 1657 aa19.62■□□□□ 0.73
LINC00475-204ENST00000421234 LTBP4Q8N2S1 1624 aa19.62■□□□□ 0.73
LINC00475-204ENST00000421234 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
LINC00475-204ENST00000421234 SYNMO15061 1565 aa19.61■□□□□ 0.73
LINC00475-204ENST00000421234 RPRD2Q5VT52 1461 aaKnown RBP19.61■□□□□ 0.73
LINC00475-204ENST00000421234 KDM5AP29375 1690 aaKnown RBP19.61■□□□□ 0.73
LINC00475-204ENST00000421234 STAG3Q9UJ98 1225 aa19.59■□□□□ 0.73
LINC00475-204ENST00000421234 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
LINC00475-204ENST00000421234 E9PCH4 1651 aa19.59■□□□□ 0.73
LINC00475-204ENST00000421234 ZNF335Q9H4Z2 1342 aaPredicted RBP19.58■□□□□ 0.73
LINC00475-204ENST00000421234 MED14O60244 1454 aa19.57■□□□□ 0.72
LINC00475-204ENST00000421234 NOS1P29475 1434 aa19.57■□□□□ 0.72
LINC00475-204ENST00000421234 EVX2Q03828 476 aa19.56■□□□□ 0.72
LINC00475-204ENST00000421234 SLIT1O75093 1534 aa19.56■□□□□ 0.72
LINC00475-204ENST00000421234 IQSEC2Q5JU85 1478 aa19.55■□□□□ 0.72
LINC00475-204ENST00000421234 ADGRB3O60242 1522 aa19.55■□□□□ 0.72
LINC00475-204ENST00000421234 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
LINC00475-204ENST00000421234 MYO5BQ9ULV0 1848 aa19.54■□□□□ 0.72
LINC00475-204ENST00000421234 NUP155O75694 1391 aa19.54■□□□□ 0.72
LINC00475-204ENST00000421234 ARHGAP23Q9P227 1491 aa19.53■□□□□ 0.72
LINC00475-204ENST00000421234 IDI1Q13907 227 aa19.52■□□□□ 0.72
LINC00475-204ENST00000421234 SLC52A1Q9NWF4 448 aa19.51■□□□□ 0.71
LINC00475-204ENST00000421234 EID1Q9Y6B2 187 aa19.51■□□□□ 0.71
LINC00475-204ENST00000421234 CPS1P31327 1500 aa19.5■□□□□ 0.71
LINC00475-204ENST00000421234 NAIPQ13075 1403 aa19.5■□□□□ 0.71
LINC00475-204ENST00000421234 TMEM2Q9UHN6 1383 aa19.49■□□□□ 0.71
LINC00475-204ENST00000421234 TXNDC2Q86VQ3 553 aa19.49■□□□□ 0.71
LINC00475-204ENST00000421234 SPHKAPQ2M3C7 1700 aa19.48■□□□□ 0.71
LINC00475-204ENST00000421234 HFM1A2PYH4 1435 aa19.46■□□□□ 0.71
LINC00475-204ENST00000421234 LTKP29376 864 aa19.46■□□□□ 0.71
LINC00475-204ENST00000421234 TMEM131LA2VDJ0 1609 aa19.46■□□□□ 0.71
LINC00475-204ENST00000421234 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
LINC00475-204ENST00000421234 CHGAP10645 457 aaKnown RBP19.43■□□□□ 0.7
LINC00475-204ENST00000421234 ZBTB22O15209 634 aa19.41■□□□□ 0.7
LINC00475-204ENST00000421234 TRIM52Q96A61 297 aa19.4■□□□□ 0.7
LINC00475-204ENST00000421234 SPDYE2BA6NHP3 402 aa19.39■□□□□ 0.69
LINC00475-204ENST00000421234 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
LINC00475-204ENST00000421234 SPDYE6P0CI01 402 aa19.39■□□□□ 0.69
LINC00475-204ENST00000421234 SPDYE2Q495Y8 402 aa19.39■□□□□ 0.69
LINC00475-204ENST00000421234 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
LINC00475-204ENST00000421234 HDGFP51858 240 aaKnown RBP19.38■□□□□ 0.69
LINC00475-204ENST00000421234 RIMS2Q9UQ26 1411 aa19.38■□□□□ 0.69
LINC00475-204ENST00000421234 BCANQ96GW7 911 aa19.37■□□□□ 0.69
LINC00475-204ENST00000421234 KIF1BO60333 1816 aa19.37■□□□□ 0.69
LINC00475-204ENST00000421234 ZFYVE9O95405 1425 aa19.36■□□□□ 0.69
LINC00475-204ENST00000421234 TRPM2O94759 1503 aa19.35■□□□□ 0.69
LINC00475-204ENST00000421234 CLTCL1P53675 1640 aa19.34■□□□□ 0.69
LINC00475-204ENST00000421234 LRRC7Q96NW7 1537 aa19.34■□□□□ 0.69
LINC00475-204ENST00000421234 PRKAR2AP13861 404 aaKnown RBP19.33■□□□□ 0.68
LINC00475-204ENST00000421234 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.33■□□□□ 0.68
LINC00475-204ENST00000421234 PLEKHG1Q9ULL1 1385 aa19.32■□□□□ 0.68
LINC00475-204ENST00000421234 SLC26A8Q96RN1 970 aa19.32■□□□□ 0.68
LINC00475-204ENST00000421234 XIRP1Q702N8 1843 aaKnown RBP19.32■□□□□ 0.68
LINC00475-204ENST00000421234 TOM1O60784 492 aa19.31■□□□□ 0.68
LINC00475-204ENST00000421234 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
LINC00475-204ENST00000421234 NWD1Q149M9 1564 aa19.28■□□□□ 0.68
LINC00475-204ENST00000421234 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
LINC00475-204ENST00000421234 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
LINC00475-204ENST00000421234 NUTM2DQ5VT03 806 aaPredicted RBP19.28■□□□□ 0.68
LINC00475-204ENST00000421234 CLEC11AQ9Y240 323 aa19.27■□□□□ 0.68
LINC00475-204ENST00000421234 ATXN8OSP0DMR3 200 aa19.26■□□□□ 0.67
LINC00475-204ENST00000421234 KCNA6P17658 529 aa19.26■□□□□ 0.67
LINC00475-204ENST00000421234 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
LINC00475-204ENST00000421234 NKTRP30414 1462 aaKnown RBP19.25■□□□□ 0.67
LINC00475-204ENST00000421234 SPDYE1Q8NFV5 336 aaPredicted RBP19.23■□□□□ 0.67
LINC00475-204ENST00000421234 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
LINC00475-204ENST00000421234 ALKQ9UM73 1620 aa19.22■□□□□ 0.67
LINC00475-204ENST00000421234 NEXMIFQ5QGS0 1516 aa19.22■□□□□ 0.67
LINC00475-204ENST00000421234 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
LINC00475-204ENST00000421234 ADAMTS13Q76LX8 1427 aa19.21■□□□□ 0.67
LINC00475-204ENST00000421234 PROSER2Q86WR7 435 aaPredicted RBP19.21■□□□□ 0.67
LINC00475-204ENST00000421234 TBX22Q9Y458 520 aa19.21■□□□□ 0.67
LINC00475-204ENST00000421234 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
LINC00475-204ENST00000421234 NRXN3Q9Y4C0 1643 aa19.2■□□□□ 0.66
LINC00475-204ENST00000421234 SETBP1Q9Y6X0 1596 aa19.19■□□□□ 0.66
LINC00475-204ENST00000421234 C19orf67A6NJJ6 358 aa19.19■□□□□ 0.66
LINC00475-204ENST00000421234 MPHOSPH9Q99550 1183 aa19.18■□□□□ 0.66
LINC00475-204ENST00000421234 PPLO60437 1756 aa19.18■□□□□ 0.66
LINC00475-204ENST00000421234 PIK3R4Q99570 1358 aa19.18■□□□□ 0.66
LINC00475-204ENST00000421234 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
LINC00475-204ENST00000421234 RAB3GAP2Q9H2M9 1393 aa19.16■□□□□ 0.66
LINC00475-204ENST00000421234 RBM33Q96EV2 1170 aaKnown RBP19.15■□□□□ 0.66
LINC00475-204ENST00000421234 MSH6P52701 1360 aa19.14■□□□□ 0.65
LINC00475-204ENST00000421234 HSPA1LP34931 641 aa19.13■□□□□ 0.65
LINC00475-204ENST00000421234 XRN1Q8IZH2 1706 aaKnown RBP19.12■□□□□ 0.65
LINC00475-204ENST00000421234 VGFO15240 615 aaPredicted RBP19.11■□□□□ 0.65
LINC00475-204ENST00000421234 C14orf37Q86TY3 774 aa19.11■□□□□ 0.65
LINC00475-204ENST00000421234 RPGRIP1LQ68CZ1 1315 aa19.1■□□□□ 0.65
LINC00475-204ENST00000421234 GABBR2O75899 941 aa19.1■□□□□ 0.65
LINC00475-204ENST00000421234 IFT172Q9UG01 1749 aa19.1■□□□□ 0.65
LINC00475-204ENST00000421234 ROBO1Q9Y6N7 1651 aa19.1■□□□□ 0.65
LINC00475-204ENST00000421234 PTPRUQ92729 1446 aa19.09■□□□□ 0.65
LINC00475-204ENST00000421234 SETD1AO15047 1707 aaKnown RBP19.09■□□□□ 0.65
LINC00475-204ENST00000421234 AMOTL2Q9Y2J4 779 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms