RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ARXQ96QS3 562 aa18.54■□□□□ 0.56
AP000550.1-201ENST00000420508 PPP2R1AP30153 589 aa18.54■□□□□ 0.56
AP000550.1-201ENST00000420508 KIAA0556O60303 1618 aa18.54■□□□□ 0.56
AP000550.1-201ENST00000420508 KCNJ4P48050 445 aa18.53■□□□□ 0.56
AP000550.1-201ENST00000420508 WDR62O43379 1518 aa18.53■□□□□ 0.56
AP000550.1-201ENST00000420508 API5Q9BZZ5 524 aaKnown RBP18.53■□□□□ 0.56
AP000550.1-201ENST00000420508 CT47B1P0C2W7 299 aaPredicted RBP18.53■□□□□ 0.56
AP000550.1-201ENST00000420508 AMPHP49418 695 aa18.52■□□□□ 0.56
AP000550.1-201ENST00000420508 KIAA1211Q6ZU35 1233 aa18.52■□□□□ 0.56
AP000550.1-201ENST00000420508 GPATCH3Q96I76 525 aa18.52■□□□□ 0.56
AP000550.1-201ENST00000420508 ZNF608Q9ULD9 1512 aaPredicted RBP18.52■□□□□ 0.56
AP000550.1-201ENST00000420508 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.55
AP000550.1-201ENST00000420508 SHANK2Q9UPX8 1470 aa18.52■□□□□ 0.55
AP000550.1-201ENST00000420508 PTMAP06454 111 aaKnown RBP18.51■□□□□ 0.55
AP000550.1-201ENST00000420508 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
AP000550.1-201ENST00000420508 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
AP000550.1-201ENST00000420508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.5■□□□□ 0.55
AP000550.1-201ENST00000420508 GNAI1P63096 354 aa18.49■□□□□ 0.55
AP000550.1-201ENST00000420508 DZIP1LQ8IYY4 767 aaKnown RBP18.49■□□□□ 0.55
AP000550.1-201ENST00000420508 NUP153P49790 1475 aaKnown RBP18.49■□□□□ 0.55
AP000550.1-201ENST00000420508 SOX12O15370 315 aa18.48■□□□□ 0.55
AP000550.1-201ENST00000420508 NUP160Q12769 1436 aa18.48■□□□□ 0.55
AP000550.1-201ENST00000420508 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
AP000550.1-201ENST00000420508 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
AP000550.1-201ENST00000420508 PDE3AQ14432 1141 aa18.47■□□□□ 0.55
AP000550.1-201ENST00000420508 CFAP70Q5T0N1 1121 aa18.47■□□□□ 0.55
AP000550.1-201ENST00000420508 NBPF1Q3BBV0 1214 aa18.47■□□□□ 0.55
AP000550.1-201ENST00000420508 CLUAP1Q96AJ1 413 aa18.47■□□□□ 0.55
AP000550.1-201ENST00000420508 GOLGA6L6A8MZA4 724 aa18.46■□□□□ 0.55
AP000550.1-201ENST00000420508 ATAD2Q6PL18 1390 aa18.46■□□□□ 0.55
AP000550.1-201ENST00000420508 ADAMTS8Q9UP79 889 aa18.46■□□□□ 0.55
AP000550.1-201ENST00000420508 FAM135AQ9P2D6 1515 aa18.46■□□□□ 0.55
AP000550.1-201ENST00000420508 FAM69CQ0P6D2 419 aa18.46■□□□□ 0.55
AP000550.1-201ENST00000420508 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
AP000550.1-201ENST00000420508 FGD1P98174 961 aa18.46■□□□□ 0.54
AP000550.1-201ENST00000420508 SYAP1Q96A49 352 aaPredicted RBP18.45■□□□□ 0.54
AP000550.1-201ENST00000420508 RALGAPBQ86X10 1494 aa18.45■□□□□ 0.54
AP000550.1-201ENST00000420508 SAMD9Q5K651 1589 aa18.45■□□□□ 0.54
AP000550.1-201ENST00000420508 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
AP000550.1-201ENST00000420508 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
AP000550.1-201ENST00000420508 MFAP1P55081 439 aaKnown RBP18.44■□□□□ 0.54
AP000550.1-201ENST00000420508 RIPK4P57078 832 aa18.44■□□□□ 0.54
AP000550.1-201ENST00000420508 HTATSF1O43719 755 aaKnown RBP18.43■□□□□ 0.54
AP000550.1-201ENST00000420508 DDX11L8A8MPP1 907 aa18.43■□□□□ 0.54
AP000550.1-201ENST00000420508 PLIN1O60240 522 aa18.43■□□□□ 0.54
AP000550.1-201ENST00000420508 ST18O60284 1047 aa18.43■□□□□ 0.54
AP000550.1-201ENST00000420508 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
AP000550.1-201ENST00000420508 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
AP000550.1-201ENST00000420508 COG6Q9Y2V7 657 aa18.42■□□□□ 0.54
AP000550.1-201ENST00000420508 ADGRL1O94910 1474 aa18.42■□□□□ 0.54
AP000550.1-201ENST00000420508 NRDCO43847 1150 aa18.42■□□□□ 0.54
AP000550.1-201ENST00000420508 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
AP000550.1-201ENST00000420508 GOLGA6L4A6NEF3 574 aa18.41■□□□□ 0.54
AP000550.1-201ENST00000420508 CSPP1Q1MSJ5 1256 aa18.41■□□□□ 0.54
AP000550.1-201ENST00000420508 PTPRKQ15262 1439 aa18.41■□□□□ 0.54
AP000550.1-201ENST00000420508 PBRM1Q86U86 1689 aa18.4■□□□□ 0.54
AP000550.1-201ENST00000420508 EIF2AK4Q9P2K8 1649 aaKnown RBP18.4■□□□□ 0.54
AP000550.1-201ENST00000420508 ATP10BO94823 1461 aa18.4■□□□□ 0.54
AP000550.1-201ENST00000420508 SCAF11Q99590 1463 aaKnown RBP18.4■□□□□ 0.54
AP000550.1-201ENST00000420508 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
AP000550.1-201ENST00000420508 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.53
AP000550.1-201ENST00000420508 ZNF428Q96B54 188 aa18.38■□□□□ 0.53
AP000550.1-201ENST00000420508 A0A0G2JS52 829 aa18.38■□□□□ 0.53
AP000550.1-201ENST00000420508 SKOR2Q2VWA4 1001 aaPredicted RBP18.38■□□□□ 0.53
AP000550.1-201ENST00000420508 MTHFSP49914 203 aa18.37■□□□□ 0.53
AP000550.1-201ENST00000420508 PLCH2O75038 1416 aa18.37■□□□□ 0.53
AP000550.1-201ENST00000420508 CSB-PGBD3P0DP91 1061 aa18.37■□□□□ 0.53
AP000550.1-201ENST00000420508 ZNF692Q9BU19 519 aaPredicted RBP18.37■□□□□ 0.53
AP000550.1-201ENST00000420508 TCP11L2Q8N4U5 519 aa18.36■□□□□ 0.53
AP000550.1-201ENST00000420508 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
AP000550.1-201ENST00000420508 SLKQ9H2G2 1235 aaPredicted RBP18.36■□□□□ 0.53
AP000550.1-201ENST00000420508 CD109Q6YHK3 1445 aa18.35■□□□□ 0.53
AP000550.1-201ENST00000420508 NSD2O96028 1365 aa18.35■□□□□ 0.53
AP000550.1-201ENST00000420508 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
AP000550.1-201ENST00000420508 GOLGA6L3A6NEY3 463 aa18.35■□□□□ 0.53
AP000550.1-201ENST00000420508 REC8O95072 547 aa18.34■□□□□ 0.53
AP000550.1-201ENST00000420508 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
AP000550.1-201ENST00000420508 DHX29Q7Z478 1369 aaKnown RBP18.34■□□□□ 0.53
AP000550.1-201ENST00000420508 MSNP26038 577 aaKnown RBP18.33■□□□□ 0.53
AP000550.1-201ENST00000420508 ANKRD45Q5TZF3 282 aa18.33■□□□□ 0.52
AP000550.1-201ENST00000420508 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
AP000550.1-201ENST00000420508 FANCAO15360 1455 aa18.33■□□□□ 0.52
AP000550.1-201ENST00000420508 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
AP000550.1-201ENST00000420508 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
AP000550.1-201ENST00000420508 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
AP000550.1-201ENST00000420508 APBB1O00213 710 aa18.31■□□□□ 0.52
AP000550.1-201ENST00000420508 DNTTIP2Q5QJE6 756 aaKnown RBP18.31■□□□□ 0.52
AP000550.1-201ENST00000420508 BCL2L13Q9BXK5 485 aa18.31■□□□□ 0.52
AP000550.1-201ENST00000420508 PHF14O94880 888 aa18.31■□□□□ 0.52
AP000550.1-201ENST00000420508 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
AP000550.1-201ENST00000420508 GGNBP2Q9H3C7 697 aa18.3■□□□□ 0.52
AP000550.1-201ENST00000420508 KIF3AQ9Y496 699 aa18.3■□□□□ 0.52
AP000550.1-201ENST00000420508 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
AP000550.1-201ENST00000420508 HSP90AB4PQ58FF6 505 aa18.3■□□□□ 0.52
AP000550.1-201ENST00000420508 POGZQ7Z3K3 1410 aa18.3■□□□□ 0.52
AP000550.1-201ENST00000420508 TEFQ10587 303 aa18.29■□□□□ 0.52
AP000550.1-201ENST00000420508 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
AP000550.1-201ENST00000420508 GAS2L2Q8NHY3 880 aa18.28■□□□□ 0.52
AP000550.1-201ENST00000420508 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
AP000550.1-201ENST00000420508 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms